Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00130
         (658 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0303 - 22939513-22939598,22940065-22940194,22940753-22941073     28   7.5  
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668...    27   9.9  
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567...    27   9.9  

>03_05_0303 - 22939513-22939598,22940065-22940194,22940753-22941073
          Length = 178

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -1

Query: 169 IKLNLPLTYRGRDVFIQLLYTI*FRSLYAML 77
           +K+NLP+ ++G DV   L   + + S+YA L
Sbjct: 131 LKVNLPVEFKGEDVCPGLKKALFYESMYAHL 161


>03_06_0253 -
           32666152-32666360,32666443-32666632,32666764-32666862,
           32666999-32667094,32667408-32668361,32668683-32668901,
           32669282-32669491,32669617-32669879,32670041-32671717,
           32672702-32672852
          Length = 1355

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 626 FHHIYDNNVFPNMSLKFLY*L*NNGVYK 543
           FH ++D+N+F   S+K +     +GVYK
Sbjct: 260 FHRLFDSNLFDERSVKIVASNTGSGVYK 287


>03_06_0252 -
           32656068-32656276,32656361-32656550,32656682-32656780,
           32656917-32657012,32657200-32658153,32658476-32658694,
           32658911-32659120,32659241-32659503,32659605-32661281,
           32663639-32663792
          Length = 1356

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 626 FHHIYDNNVFPNMSLKFLY*L*NNGVYK 543
           FH ++D+N+F   S+K +     +GVYK
Sbjct: 261 FHRLFDSNLFDERSVKIVASNTGSGVYK 288


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,480,893
Number of Sequences: 37544
Number of extensions: 256760
Number of successful extensions: 315
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)