BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00129 (683 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 137 7e-33 SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 136 2e-32 SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 5e-32 SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 116 1e-26 SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 70 2e-12 SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12 SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 58 5e-09 SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 5e-04 SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006 SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66 SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.87 SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.7 SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5 SB_7343| Best HMM Match : EGF (HMM E-Value=0) 29 3.5 SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.6 SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1 SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.1 SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 28 8.1 >SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) Length = 640 Score = 137 bits (332), Expect = 7e-33 Identities = 63/89 (70%), Positives = 76/89 (85%) Frame = +1 Query: 241 PQQHKFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSI 420 P+ FDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SS+ Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122 Query: 421 VLTKMKETAEAYLGKTVQNAVITVPAYFN 507 VL KMKETAEAYLG+ V +AVITVPAYFN Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFN 151 Score = 131 bits (317), Expect = 4e-31 Identities = 59/66 (89%), Positives = 63/66 (95%) Frame = +2 Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235 M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60 Query: 236 MNPNNT 253 +NP NT Sbjct: 61 LNPENT 66 Score = 101 bits (243), Expect = 4e-22 Identities = 49/58 (84%), Positives = 54/58 (93%) Frame = +3 Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGT*ERNVLIFDLGGGTFDVSSL 683 SQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK + E+NVLIFDLGGGTFDVS L Sbjct: 153 SQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSIL 210 >SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1097 Score = 136 bits (329), Expect = 2e-32 Identities = 63/66 (95%), Positives = 64/66 (96%) Frame = +2 Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235 MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60 Query: 236 MNPNNT 253 MNP NT Sbjct: 61 MNPENT 66 Score = 135 bits (326), Expect = 4e-32 Identities = 60/89 (67%), Positives = 73/89 (82%) Frame = +1 Query: 241 PQQHKFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSI 420 P+ FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SS+ Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122 Query: 421 VLTKMKETAEAYLGKTVQNAVITVPAYFN 507 VLTKMKETAEAYLG V +AV+TVPAYF+ Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFH 151 Score = 104 bits (249), Expect = 8e-23 Identities = 52/58 (89%), Positives = 54/58 (93%) Frame = +3 Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGT*ERNVLIFDLGGGTFDVSSL 683 SQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS L Sbjct: 153 SQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVL 210 >SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 746 Score = 134 bits (325), Expect = 5e-32 Identities = 61/66 (92%), Positives = 63/66 (95%) Frame = +2 Query: 56 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235 M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60 Query: 236 MNPNNT 253 MNP NT Sbjct: 61 MNPTNT 66 Score = 112 bits (269), Expect = 3e-25 Identities = 63/114 (55%), Positives = 73/114 (64%), Gaps = 25/114 (21%) Frame = +1 Query: 241 PQQHKFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV--- 411 P FDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122 Query: 412 ----------------------SSIVLTKMKETAEAYLGKTVQNAVITVPAYFN 507 SS+VL KMKETAEAYLG V +AV+TVPAYFN Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFN 176 Score = 104 bits (250), Expect = 6e-23 Identities = 53/58 (91%), Positives = 53/58 (91%) Frame = +3 Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGT*ERNVLIFDLGGGTFDVSSL 683 SQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS L Sbjct: 246 SQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVL 303 Score = 55.2 bits (127), Expect = 5e-08 Identities = 25/34 (73%), Positives = 30/34 (88%) Frame = +1 Query: 406 EVSSIVLTKMKETAEAYLGKTVQNAVITVPAYFN 507 ++SS+VL KMKETAEAYLG V +AV+TVPAYFN Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFN 244 >SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1327 Score = 116 bits (280), Expect = 1e-26 Identities = 55/89 (61%), Positives = 69/89 (77%) Frame = +1 Query: 241 PQQHKFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSI 420 P+ FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S++ Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820 Query: 421 VLTKMKETAEAYLGKTVQNAVITVPAYFN 507 VLTKMKETAEAYLGK V +AV+TVPAYFN Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFN 849 Score = 104 bits (249), Expect = 8e-23 Identities = 48/61 (78%), Positives = 54/61 (88%), Gaps = 1/61 (1%) Frame = +2 Query: 74 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 250 +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763 Query: 251 T 253 T Sbjct: 764 T 764 Score = 93.9 bits (223), Expect = 1e-19 Identities = 45/58 (77%), Positives = 52/58 (89%) Frame = +3 Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGT*ERNVLIFDLGGGTFDVSSL 683 +QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK E+N+L+FDLGGGTFDVS L Sbjct: 851 AQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKKEG-EKNILVFDLGGGTFDVSLL 907 >SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) Length = 437 Score = 70.1 bits (164), Expect = 2e-12 Identities = 35/57 (61%), Positives = 43/57 (75%) Frame = +3 Query: 513 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGT*ERNVLIFDLGGGTFDVSSL 683 QR AT A +++G+ VLR+INEPTAAA+AYGL KK NV++ DLGGGT DVS L Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKKEG-VANVMVVDLGGGTLDVSLL 239 Score = 69.7 bits (163), Expect = 2e-12 Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 2/66 (3%) Frame = +2 Query: 62 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 235 K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89 Query: 236 MNPNNT 253 +NP NT Sbjct: 90 INPKNT 95 Score = 56.0 bits (129), Expect = 3e-08 Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 1/105 (0%) Frame = +1 Query: 241 PQQHKFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 417 P+ +DAKR IG+ F + K + F V +D G V KG PEE+ Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151 Query: 418 IVLTKMKETAEAYLGKTVQNAVITVPAYFNALKDKPQKMQVPSLA 552 V+ K++ AE L TV AV++VPA F+ +K + ++ SLA Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPAEFD-IKQRNATVKAASLA 195 >SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1068 Score = 69.3 bits (162), Expect = 3e-12 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%) Frame = +1 Query: 265 KRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSIVLTKMKE 441 KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +++ T++K Sbjct: 127 KRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKT 186 Query: 442 TAEAYLGKTVQNAVITVPAYF 504 TAE L V + VI+VP+Y+ Sbjct: 187 TAEIALKTKVTDCVISVPSYY 207 Score = 49.6 bits (113), Expect = 2e-06 Identities = 22/52 (42%), Positives = 33/52 (63%) Frame = +2 Query: 74 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 229 VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55 Score = 42.7 bits (96), Expect = 3e-04 Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Frame = +3 Query: 513 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---T*ERNVLIFDLGGGTFDV 674 QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G + V Sbjct: 211 QRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQV 267 >SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) Length = 179 Score = 58.4 bits (135), Expect = 5e-09 Identities = 26/49 (53%), Positives = 38/49 (77%) Frame = +1 Query: 361 IKVAYKGEDKTFFPEEVSSIVLTKMKETAEAYLGKTVQNAVITVPAYFN 507 I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FN Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFN 50 Score = 46.4 bits (105), Expect = 2e-05 Identities = 36/68 (52%), Positives = 39/68 (57%), Gaps = 26/68 (38%) Frame = +3 Query: 510 SQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLDKK 617 +QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLDK Sbjct: 52 AQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKA 111 Query: 618 --GT*ERN 635 G ERN Sbjct: 112 RGGKAERN 119 >SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) Length = 592 Score = 41.9 bits (94), Expect = 5e-04 Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = +2 Query: 125 GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTN---SMPNVSSDVSSKM 295 G IIAND G+R TP+ VAF+DTE+LI + N N S V + + KM Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142 Query: 296 L 298 L Sbjct: 143 L 143 >SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1019 Score = 38.3 bits (85), Expect = 0.006 Identities = 17/51 (33%), Positives = 29/51 (56%) Frame = +1 Query: 355 PKIKVAYKGEDKTFFPEEVSSIVLTKMKETAEAYLGKTVQNAVITVPAYFN 507 P +K Y+ D TF PEE+ ++L + E + +++ V+TVP +FN Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFN 117 Score = 37.9 bits (84), Expect = 0.008 Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 4/56 (7%) Frame = +3 Query: 510 SQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GT*ERNVLIFDLGGGT 665 ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G + Sbjct: 119 AERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASS 174 >SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 627 Score = 31.5 bits (68), Expect = 0.66 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = +3 Query: 450 SLSWQNCAECSYHGSRVLQCSQRQAT--KDAGTISGLNVLRIINEP 581 SL W C + YHG +V++C+ A AG S NV+R + P Sbjct: 523 SLVWARCPKHKYHGYKVIRCAVAAAVCHFHAGASSRENVMRRLCVP 568 >SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) Length = 212 Score = 31.1 bits (67), Expect = 0.87 Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%) Frame = +2 Query: 134 EIIANDQGNRTTPSYVAFT-DTERL 205 ++I N +G+RTTPS VAFT + ERL Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31 >SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) Length = 350 Score = 29.5 bits (63), Expect = 2.7 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = -1 Query: 242 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 144 GS PPG W R +AR T +T +SC PG W Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236 >SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 766 Score = 29.1 bits (62), Expect = 3.5 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +3 Query: 636 VLIFDLGGGTFDVSSL 683 + ++DLGGGTFD+S L Sbjct: 2 IAVYDLGGGTFDISIL 17 >SB_7343| Best HMM Match : EGF (HMM E-Value=0) Length = 1233 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/72 (23%), Positives = 29/72 (40%) Frame = +2 Query: 95 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTNSMPNVS 274 T++ + H I+ N G +TP + T A + + M P N V+ Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618 Query: 275 SDVSSKMLLCKP 310 + V S ++ KP Sbjct: 619 TTVPSTSVVVKP 630 >SB_9053| Best HMM Match : TIG (HMM E-Value=0) Length = 2990 Score = 28.7 bits (61), Expect = 4.6 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 2 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 88 HVC +V T K K ++K PA GI+L Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228 >SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1506 Score = 28.3 bits (60), Expect = 6.1 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = -1 Query: 449 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRP 276 S F+F ST + +S +KV+ SPL + + P+ G S C V + + P Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCP 1165 >SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) Length = 1774 Score = 27.9 bits (59), Expect = 8.1 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -1 Query: 644 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 558 +K ISF +LF+ VSN S+ R+I +E+ Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780 >SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) Length = 933 Score = 27.9 bits (59), Expect = 8.1 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = +1 Query: 352 KPKIKVA-YKGEDKTFFPEEVSSIVLTKMKETAEAYLGKTVQNAVITVPAYFNALKDKPQ 528 +P K A Y +D+T E + + LT + ++ NAV P Y++ L+DKP Sbjct: 435 RPADKQAEYLEDDETDGFESGALLNLTPARSRNPVQRNESYCNAVSRSPGYYSPLRDKPA 494 Query: 529 K 531 + Sbjct: 495 R 495 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,598,171 Number of Sequences: 59808 Number of extensions: 510028 Number of successful extensions: 1568 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1458 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1562 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1769412099 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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