Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00128
         (795 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069812-1|AAL39957.1|  937|Drosophila melanogaster SD05477p pro...    31   2.4  
AE014298-1945|AAN09334.1|  937|Drosophila melanogaster CG32627-P...    31   2.4  
AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-P...    31   2.4  
AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p pro...    29   7.3  

>AY069812-1|AAL39957.1|  937|Drosophila melanogaster SD05477p
           protein.
          Length = 937

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 27/92 (29%), Positives = 42/92 (45%)
 Frame = -2

Query: 515 RPSFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 336
           R  FA+P   ++ D +   P  P E  V+ E  + H+ Y +  VP   N+P G+ L+P  
Sbjct: 178 RDLFALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRP 234

Query: 335 AGVLNGDERFRHVTTLHAWNETPCARRIIDRA 240
            G  NG   F +        E P A++  D +
Sbjct: 235 VGEENGIVVFSYSPISAVNYEKPKAKKEDDES 266


>AE014298-1945|AAN09334.1|  937|Drosophila melanogaster CG32627-PB,
           isoform B protein.
          Length = 937

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 27/92 (29%), Positives = 42/92 (45%)
 Frame = -2

Query: 515 RPSFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 336
           R  FA+P   ++ D +   P  P E  V+ E  + H+ Y +  VP   N+P G+ L+P  
Sbjct: 178 RDLFALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRP 234

Query: 335 AGVLNGDERFRHVTTLHAWNETPCARRIIDRA 240
            G  NG   F +        E P A++  D +
Sbjct: 235 VGEENGIVVFSYSPISAVNYEKPKAKKEDDES 266


>AE014298-1944|AAF48304.2| 1201|Drosophila melanogaster CG32627-PA,
           isoform A protein.
          Length = 1201

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 27/92 (29%), Positives = 42/92 (45%)
 Frame = -2

Query: 515 RPSFAVPMRTEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 336
           R  FA+P   ++ D +   P  P E  V+ E  + H+ Y +  VP   N+P G+ L+P  
Sbjct: 178 RDLFALPKDKDN-DCSQQAPRWPVECQVIEERII-HIPY-VPAVPEPLNAPTGNELKPRP 234

Query: 335 AGVLNGDERFRHVTTLHAWNETPCARRIIDRA 240
            G  NG   F +        E P A++  D +
Sbjct: 235 VGEENGIVVFSYSPISAVNYEKPKAKKEDDES 266


>AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p
           protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -2

Query: 179 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 57
           S+ TI   CY  ++S    QCQ R+   +VFF    S A    C
Sbjct: 14  SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,843,821
Number of Sequences: 53049
Number of extensions: 820968
Number of successful extensions: 2868
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2868
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)