Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00126
(612 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 161 1e-38
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 160 2e-38
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 156 4e-37
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 141 1e-32
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 133 3e-30
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 127 2e-28
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 125 7e-28
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 119 5e-26
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 117 2e-25
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 107 2e-22
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 92 8e-18
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 82 1e-14
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 75 2e-12
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 66 5e-10
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 65 1e-09
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 61 2e-08
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 58 1e-07
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 57 4e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 53 6e-06
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 53 6e-06
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 48 2e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 3e-04
UniRef50_A7DRN5 Cluster: Ribosomal protein L18P/L5E; n=1; Candid... 40 0.035
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 40 0.062
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 39 0.081
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 39 0.081
UniRef50_Q1G9E9 Cluster: Putative uncharacterized protein; n=3; ... 38 0.19
UniRef50_A7NRD2 Cluster: Major facilitator superfamily MFS_1; n=... 33 4.0
UniRef50_Q57EB0 Cluster: Putative uncharacterized protein; n=8; ... 33 5.3
UniRef50_Q0S5U4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_A0IJZ0 Cluster: Transcriptional regulator, LuxR family;... 33 7.1
UniRef50_A5ASD2 Cluster: Putative uncharacterized protein; n=8; ... 33 7.1
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 32 9.3
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 161 bits (391), Expect = 1e-38
Identities = 69/86 (80%), Positives = 82/86 (95%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD +VCAA
Sbjct: 19 KFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAA 78
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
++HELP+YGVKVGLTNYAAAY TGLL
Sbjct: 79 YAHELPKYGVKVGLTNYAAAYCTGLL 104
Score = 112 bits (270), Expect = 5e-24
Identities = 53/85 (62%), Positives = 61/85 (71%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARRLL R DEYNVE +D PGAF CYLD GLARTTTG +VFGA+K
Sbjct: 105 LARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
Query: 75 GAVDGGLNVPHSIKRFPGYDAEWKK 1
GAVDGGL++PHS KRFPGYD+E K+
Sbjct: 165 GAVDGGLSIPHSTKRFPGYDSESKE 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MGFVKVVKNK YFKRYQVK R +GK
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGK 27
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 160 bits (389), Expect = 2e-38
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAA
Sbjct: 19 KFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAA 78
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
+SHELP+YG++VGLTNYAAAY TGLL
Sbjct: 79 YSHELPKYGIQVGLTNYAAAYCTGLL 104
Score = 126 bits (303), Expect = 5e-28
Identities = 57/84 (67%), Positives = 66/84 (78%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARR+L + +E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMK
Sbjct: 105 VARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMK 164
Query: 75 GAVDGGLNVPHSIKRFPGYDAEWK 4
GAVDGGLN+PHS+KRFPGY AE K
Sbjct: 165 GAVDGGLNIPHSVKRFPGYSAETK 188
Score = 46.8 bits (106), Expect = 4e-04
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MGFVKVVKNKQYFKRYQVK R +GK
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGK 27
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 156 bits (378), Expect = 4e-37
Identities = 70/86 (81%), Positives = 81/86 (94%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K++RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +A
Sbjct: 19 KLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASA 78
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
+SHELPRYG+KVGLTNYAAAY+TGLL
Sbjct: 79 YSHELPRYGLKVGLTNYAAAYATGLL 104
Score = 74.1 bits (174), Expect = 2e-12
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAM 79
+ARR L+ ++YNVE D P F+ LD+GLARTTTG+++F M
Sbjct: 105 LARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVM 162
Query: 78 KGAVDGGLNVPHSIKRFPGYDAEWKK 1
KG DGG+NVPHS RF G+D E K+
Sbjct: 163 KGVADGGINVPHSESRFFGFDQESKE 188
Score = 41.5 bits (93), Expect = 0.015
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MG VKV+KNK YFKRYQVK R +GK
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGK 27
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 141 bits (342), Expect = 1e-32
Identities = 61/71 (85%), Positives = 68/71 (95%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K KRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD ++CAA
Sbjct: 19 KFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAA 78
Query: 332 HSHELPRYGVK 300
+SHELPRYGVK
Sbjct: 79 YSHELPRYGVK 89
Score = 115 bits (277), Expect = 8e-25
Identities = 52/60 (86%), Positives = 54/60 (90%)
Frame = -1
Query: 183 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAEWK 4
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPGYDAE K
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MGFVKVVKNKQYFKR+QVK + +GK
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGK 27
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 133 bits (322), Expect = 3e-30
Identities = 65/105 (61%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
Frame = -2
Query: 512 KIKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVC 339
K RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQV Y+ + GD +C
Sbjct: 26 KFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTIC 85
Query: 338 AAHSHELPRYGVKVGLTNYAAAYSTGLL*HEDCFKDLDLTPYTLA 204
AA+SHELP+YG+K GLTNYAA Y+TGLL C + L LT Y LA
Sbjct: 86 AAYSHELPKYGMKAGLTNYAATYATGLL----CARRL-LTKYGLA 125
Score = 85.8 bits (203), Expect = 7e-16
Identities = 41/83 (49%), Positives = 53/83 (63%)
Frame = -1
Query: 252 ARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 73
ARRLL + ++Y+VE D F+C+LD GL RT+TGARVF A+KG
Sbjct: 115 ARRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKG 174
Query: 72 AVDGGLNVPHSIKRFPGYDAEWK 4
AVDGGL++PH+ KRF GYD + K
Sbjct: 175 AVDGGLDIPHNEKRFAGYDLQDK 197
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 127 bits (306), Expect = 2e-28
Identities = 58/101 (57%), Positives = 75/101 (74%)
Frame = -2
Query: 515 SKIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCA 336
+K +RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N + CQV Y+ ++GD +V A
Sbjct: 18 TKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAA 77
Query: 335 AHSHELPRYGVKVGLTNYAAAYSTGLL*HEDCFKDLDLTPY 213
A S EL R+G+ GLTNYAAAY+TGLL K L + +
Sbjct: 78 AESTELKRFGLTSGLTNYAAAYATGLLLARRTLKTLKMDKF 118
Score = 61.7 bits (143), Expect = 1e-08
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -1
Query: 144 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAE 10
F LD+GL R+T G RVF A+KGA DGG+++PH+ +RFPG+ +
Sbjct: 137 FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRFPGFSVD 181
Score = 32.7 bits (71), Expect = 7.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
M FVK+VK YFKR+Q K R +GK
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGK 27
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 125 bits (302), Expect = 7e-28
Identities = 52/86 (60%), Positives = 74/86 (86%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AA
Sbjct: 42 KYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAA 101
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
++HELP +G++ GLTNYAAAY+TGLL
Sbjct: 102 YAHELPAFGIEHGLTNYAAAYATGLL 127
Score = 74.9 bits (176), Expect = 1e-12
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = -1
Query: 144 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAE 10
F+ LDVGLARTTTGARVFG +KGAVDGG+ VPH RFPGY+ E
Sbjct: 171 FKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKE 215
Score = 39.5 bits (88), Expect = 0.062
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
M FVKVVKNK YFKR+QVK R +GK
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGK 50
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 119 bits (287), Expect = 5e-26
Identities = 58/97 (59%), Positives = 69/97 (71%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDY ARK L++QDKNKYN K R IVR +N + CQ+A S IEGD ++ A
Sbjct: 19 KYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEA 78
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL*HEDCFKDLDL 222
S EL RYG+ VGL NYAAAY+TGLL K L+L
Sbjct: 79 KSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNL 115
Score = 66.1 bits (154), Expect = 6e-10
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = -1
Query: 141 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAEW 7
+ +LDVG+ RTTTG RVF A+KGA DGGLN+PH RFPG E+
Sbjct: 146 KAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFPGSKNEF 190
Score = 40.7 bits (91), Expect = 0.027
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
M +VKVVKNK YFKRYQVK R +GK
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGK 27
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 117 bits (282), Expect = 2e-25
Identities = 54/106 (50%), Positives = 75/106 (70%)
Frame = -2
Query: 539 QTILQEVPSKIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 360
Q LQ + +IK+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ +
Sbjct: 301 QIFLQSI--QIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATL 358
Query: 359 EGDHLVCAAHSHELPRYGVKVGLTNYAAAYSTGLL*HEDCFKDLDL 222
+ D ++CAA S+EL R+GV GL +YAAAY+TGLL K + L
Sbjct: 359 KCDRVLCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGL 404
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/79 (45%), Positives = 45/79 (56%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARRLL++ +NV+ F+ LD GL RTTTG RVFG +K
Sbjct: 394 LARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLK 453
Query: 75 GAVDGGLNVPHSIKRFPGY 19
GA DGG+N+PHS RFPGY
Sbjct: 454 GACDGGINIPHSESRFPGY 472
Score = 40.3 bits (90), Expect = 0.035
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGKLIIMLVNASLFRTR-----TNITHLNIV*L-CV 404
+GFVKV+K K YFKR+Q K R +L V++ LF +R +I H I + C
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRRGKQLYYFFVSSRLFYSRYLIVSNSILHHTITHIWCK 72
Query: 403 SPTKM*HARWPT 368
SP + +PT
Sbjct: 73 SPQYLIMRAYPT 84
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 107 bits (257), Expect = 2e-22
Identities = 47/87 (54%), Positives = 62/87 (71%)
Frame = -2
Query: 515 SKIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCA 336
+K +RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+ + + GD VC
Sbjct: 17 TKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQ 76
Query: 335 AHSHELPRYGVKVGLTNYAAAYSTGLL 255
A S ELP+YG+K+GL+NY AAY+TGLL
Sbjct: 77 ALSTELPKYGIKLGLSNYPAAYATGLL 103
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -1
Query: 144 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 31
F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R
Sbjct: 136 FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCR 173
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 92.3 bits (219), Expect = 8e-18
Identities = 41/86 (47%), Positives = 58/86 (67%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + ++GD ++ A
Sbjct: 13 KRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYA 72
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
S EL RYG+ G TNY+AAY+TG L
Sbjct: 73 DSRELERYGINFGATNYSAAYATGFL 98
Score = 66.5 bits (155), Expect = 5e-10
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = -1
Query: 180 YNV-EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 19
Y+V + +D A R +LD+GLAR+T GARVFGA+KGA D GLNVPHS +F G+
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKFYGH 176
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 351
K KRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 30 KFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/82 (47%), Positives = 49/82 (59%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARRLL + + Y+VE +N F+ LDVG+ TTG RVFGA+K
Sbjct: 54 LARRLLTKLKLDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALK 113
Query: 75 GAVDGGLNVPHSIKRFPGYDAE 10
GA DGGL+VPHS KRFPGY +
Sbjct: 114 GACDGGLHVPHSEKRFPGYSVD 135
Score = 62.9 bits (146), Expect = 6e-09
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = -2
Query: 404 LSNKDVTCQVAYSRIEGDHLVCAAHSHELPRYGVKVGLTNYAAAYSTGLL 255
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TGLL
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLL 53
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = -2
Query: 416 LIVRLSNKDVTCQVAYSRIEGDHLVCAAHSHELPRYGVKVGLTNYAAAYSTGLL 255
+IV +N+ + CQ+AY+ E D +VCAA++HELP+ GVKVGLTNYAAAY GLL
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIGLL 54
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -1
Query: 123 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAEWKK 1
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ K+
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKE 111
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 66.5 bits (155), Expect = 5e-10
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = -2
Query: 509 IKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAAH 330
++RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD ++ AAH
Sbjct: 11 LRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRVIAAAH 63
Query: 329 SHEL-PRYGVKVGLTNYAAAYSTGLL 255
S EL ++G K N AAY TG L
Sbjct: 64 SRELIKKFGWKGDGNNTCAAYLTGYL 89
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -1
Query: 150 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 22
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG 140
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S ++GD ++ ++
Sbjct: 19 KKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSS 78
Query: 332 HSHELPRYGVKVGLTNYAAAYSTG 261
+ L + K NY +Y G
Sbjct: 79 YLKNLSKLEYKNLTNNYPFSYLLG 102
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = -1
Query: 132 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 31
+D+GL R T G + F +MKG+VD G+N+PH+ +
Sbjct: 132 IDIGLKRATIGNKSFASMKGSVDSGINIPHNYNK 165
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 61.3 bits (142), Expect = 2e-08
Identities = 34/84 (40%), Positives = 48/84 (57%)
Frame = -2
Query: 506 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAAHS 327
+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD + AA+S
Sbjct: 12 RRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYS 64
Query: 326 HELPRYGVKVGLTNYAAAYSTGLL 255
EL YG + + AAY TG+L
Sbjct: 65 AELAGYGYEGSTASTPAAYLTGML 88
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = -1
Query: 132 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 25
LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 58.4 bits (135), Expect = 1e-07
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = -2
Query: 509 IKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAAH 330
++RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD + +AH
Sbjct: 11 MRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAH 63
Query: 329 SHELPRYGVKVGLTNYAAAYSTGLL 255
S +L YG + N +AY TGLL
Sbjct: 64 SSDLAEYGWEAPTGNMPSAYLTGLL 88
Score = 41.5 bits (93), Expect = 0.015
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -1
Query: 150 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 40
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = -1
Query: 183 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAEWK 4
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G + K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 3 K 1
+
Sbjct: 102 Q 102
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 52.8 bits (121), Expect = 6e-06
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPK 423
+ +R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 38 RFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 52.8 bits (121), Expect = 6e-06
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = -2
Query: 506 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAAHS 327
+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD +A S
Sbjct: 12 RRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDITYSSAVS 64
Query: 326 HELPRYGVKVGLTNYAAAYSTGLL 255
EL +YG N AAY TGLL
Sbjct: 65 SELAKYGYTGATGNTTAAYLTGLL 88
Score = 41.1 bits (92), Expect = 0.020
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -1
Query: 132 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 25
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 47.6 bits (108), Expect = 2e-04
Identities = 31/86 (36%), Positives = 44/86 (51%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
+ KRRREGKT+Y R +LV DK R++VR+++ Q+ GD + +A
Sbjct: 10 QFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETLVSA 62
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
S L +G N +AAY TG L
Sbjct: 63 TSKNLKEFGWLGNGKNTSAAYLTGYL 88
Score = 37.1 bits (82), Expect = 0.33
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -1
Query: 132 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 25
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = -1
Query: 150 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 25
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
Score = 37.5 bits (83), Expect = 0.25
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
+ KRRR G+TDY R R++ R +VR+SN TCQ+ GD ++ +
Sbjct: 10 RFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDEVIISV 62
Query: 332 HSHEL-PRYG--VKVGLTNYAAAYSTG 261
L R+G + + A+Y TG
Sbjct: 63 TGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_A7DRN5 Cluster: Ribosomal protein L18P/L5E; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal
protein L18P/L5E - Candidatus Nitrosopumilus maritimus
SCM1
Length = 160
Score = 40.3 bits (90), Expect = 0.035
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = -2
Query: 515 SKIKRR-REGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVC 339
SKI RR RE KT+Y R +++ K + T V ++N++ Q+ + GD +V
Sbjct: 4 SKILRRLREEKTNYRKRSTMLM-GKRDFIT------VNITNENTQVQILKPGMTGDKVVA 56
Query: 338 AAHSHELPRYGVKVGLTNYAAAYSTGLL 255
+AHS L G K + AAY TG L
Sbjct: 57 SAHSRYLLEKGWKGSRKSVPAAYLTGYL 84
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 39.5 bits (88), Expect = 0.062
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = -2
Query: 506 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHLVCAAH 330
KR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD ++
Sbjct: 7 KRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTVT 58
Query: 329 SHELPRYGVKVGLTNYAAAYSTGLL 255
L +YGV + N Y G +
Sbjct: 59 DKTLAKYGVDLRGNNIQVCYLVGYI 83
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 150 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 25
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 39.1 bits (87), Expect = 0.081
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = -2
Query: 509 IKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAAH 330
++R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + H
Sbjct: 7 LRRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGH 59
Query: 329 SHELPRYGVKVGLTNYAAAYSTGLL 255
S L G K + A+Y TG L
Sbjct: 60 SRYLASKGWKGSRKSIPASYLTGYL 84
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 39.1 bits (87), Expect = 0.081
Identities = 26/90 (28%), Positives = 42/90 (46%)
Frame = -2
Query: 524 EVPSKIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHL 345
+ P +KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH+
Sbjct: 2 KTPPVLKRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHV 54
Query: 344 VCAAHSHELPRYGVKVGLTNYAAAYSTGLL 255
+ + L + + + N Y G +
Sbjct: 55 LVTVTNKTLKK-ALNIDGNNIQMYYLAGYM 83
>UniRef50_Q1G9E9 Cluster: Putative uncharacterized protein; n=3;
Lactobacillus delbrueckii subsp. bulgaricus|Rep:
Putative uncharacterized protein - Lactobacillus
delbrueckii subsp. bulgaricus (strain ATCC 11842 /
DSM20081)
Length = 603
Score = 37.9 bits (84), Expect = 0.19
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = -2
Query: 530 LQEVPSKIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIE 357
L+EV K+K + + K Y +K++ V+ K+K KY+ + ++ K VT + AY ++
Sbjct: 55 LEEVTKKVKTKTKEKKKYTVKKKVAVKKKSKKGKTKYKTVKQVKYKWVT-KTAYKNVK 111
>UniRef50_A7NRD2 Cluster: Major facilitator superfamily MFS_1; n=2;
Chloroflexaceae|Rep: Major facilitator superfamily MFS_1
- Roseiflexus castenholzii DSM 13941
Length = 416
Score = 33.5 bits (73), Expect = 4.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 426 RCVIFVLVLNNEAFTSIIISFPFTTPLDFTWYLLKYCLFF 545
R V+ V+VL N AF+ + +FP T F W + + LFF
Sbjct: 233 RRVLMVVVLLNLAFSGLYSNFPLFTAARFGWGMFENALFF 272
>UniRef50_Q57EB0 Cluster: Putative uncharacterized protein; n=8;
Rhizobiales|Rep: Putative uncharacterized protein -
Brucella abortus
Length = 257
Score = 33.1 bits (72), Expect = 5.3
Identities = 29/90 (32%), Positives = 42/90 (46%)
Frame = -3
Query: 562 GFVKVVKNKQYFKRYQVKSRGVVKGKLIIMLVNASLFRTRTNITHLNIV*LCVSPTKM*H 383
GF +++ FK ++ G L+ M V A LFR R+ + +NI+ L +
Sbjct: 147 GFTRLMPLSVDFKSINPLFAALMGGTLMGMGVLA-LFRHRSGVGGVNILALYLQDAYGIR 205
Query: 382 ARWPTLGLKVTILCAQLIHMSCHVMV*RLV 293
A W LGL V I+ A L + MV LV
Sbjct: 206 AGWFQLGLDVLIMLASLFFIPWENMVLSLV 235
>UniRef50_Q0S5U4 Cluster: Putative uncharacterized protein; n=1;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 221
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = -2
Query: 431 TPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAAHSHELPRYGVKVGLTNYAAAYSTGLL* 252
+P RLI R V A+S +EG + A SH+ P+ + ++N A S+G+
Sbjct: 28 SPIVRLIGRTIANSVRANRAHSVVEGVEGIVAVRSHDTPQ-AATISISNGVVAVSSGVFT 86
Query: 251 HEDCFKDLDL 222
D +DL
Sbjct: 87 SPDLTLTVDL 96
>UniRef50_A0IJZ0 Cluster: Transcriptional regulator, LuxR family;
n=3; Serratia proteamaculans 568|Rep: Transcriptional
regulator, LuxR family - Serratia proteamaculans 568
Length = 203
Score = 32.7 bits (71), Expect = 7.1
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = -2
Query: 431 TPKYRLIVR--LSNKDVTCQVAYSRIEGDHLVCAAHSHELPRYGVKVGLTNYAAAYSTGL 258
TP R IV+ LS +D+T +A+ +++ D + SH+ G K+GLT+ A ++ G
Sbjct: 47 TPTERHIVQALLSGQDLTA-IAW-KLQRD--IRTISSHKQRAMG-KLGLTSNAMLHALGA 101
Query: 257 L*HEDCFKDLDLTPYTLAQQMSQVMNTMLN 168
L + D+ LA + QV+N +LN
Sbjct: 102 LLNPPLSVDITARRQLLAPREQQVLNALLN 131
>UniRef50_A5ASD2 Cluster: Putative uncharacterized protein; n=8;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1801
Score = 32.7 bits (71), Expect = 7.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 266 LNMLQHNLSDQPSHHNVATHVNELRTQDGHLQSESRPPGMLHLCW 400
LN+++ DQ SHH + N R+ H+ + G + CW
Sbjct: 346 LNIMEATPEDQHSHHGHQDNPNAFRSMRDHMHPPPKENGKFYECW 390
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 32.3 bits (70), Expect = 9.3
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = -2
Query: 512 KIKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVC 339
K +R R+ T Y R + NK + K+R +N +++ + +S + GD +V
Sbjct: 19 KHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNTNLSGVITFSSLSGDTIVA 76
Query: 338 AAHSHELPRYGVKVGLTNYAAAYSTGLL 255
A S +L ++G+ N +Y GLL
Sbjct: 77 KASSMDLIKFGLIHSKKNLINSYFIGLL 104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,575,411
Number of Sequences: 1657284
Number of extensions: 12442761
Number of successful extensions: 31620
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 30429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31608
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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