Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00126
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.2  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 127 CRLSTHHYWCSCLWSYEG 74
           C+  T HY C C + Y G
Sbjct: 76  CQDHTTHYTCHCPYGYTG 93


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 467  YEHNNQFSLHDAS*FYLVPLEVLFVLHNFNESHILNLSYKV 589
            Y H +  S +     +LVP      LH   E H+ +  YKV
Sbjct: 1213 YPHESCSSFYVCVNGHLVPQNCAPGLHYNPEEHMCDWKYKV 1253


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 53  LRPPSTAPFIAPKT 94
           L PP++ P ++PK+
Sbjct: 106 LTPPNSEPLVSPKS 119


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 345 CVRSSFT*VATLWCEGWSDKLCCSIFNWS 259
           C+ +S   ++T   E  +DK+ C   +W+
Sbjct: 6   CLLASALLISTHQTEAKTDKILCFFASWA 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,291
Number of Sequences: 336
Number of extensions: 3412
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)