Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00126
(612 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 161 2e-39
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 161 2e-39
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 161 2e-39
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 161 2e-39
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 161 2e-39
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 161 2e-39
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 159 7e-39
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 151 2e-36
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 96 8e-20
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 67 4e-11
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 161 bits (391), Expect = 2e-39
Identities = 69/86 (80%), Positives = 82/86 (95%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD +VCAA
Sbjct: 19 KFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAA 78
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
++HELP+YGVKVGLTNYAAAY TGLL
Sbjct: 79 YAHELPKYGVKVGLTNYAAAYCTGLL 104
Score = 112 bits (270), Expect = 8e-25
Identities = 53/85 (62%), Positives = 61/85 (71%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARRLL R DEYNVE +D PGAF CYLD GLARTTTG +VFGA+K
Sbjct: 105 LARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
Query: 75 GAVDGGLNVPHSIKRFPGYDAEWKK 1
GAVDGGL++PHS KRFPGYD+E K+
Sbjct: 165 GAVDGGLSIPHSTKRFPGYDSESKE 189
Score = 44.4 bits (100), Expect = 3e-04
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MGFVKVVKNK YFKRYQVK R +GK
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGK 27
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 161 bits (391), Expect = 2e-39
Identities = 69/86 (80%), Positives = 82/86 (95%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD +VCAA
Sbjct: 19 KFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAA 78
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
++HELP+YGVKVGLTNYAAAY TGLL
Sbjct: 79 YAHELPKYGVKVGLTNYAAAYCTGLL 104
Score = 112 bits (270), Expect = 8e-25
Identities = 53/85 (62%), Positives = 61/85 (71%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARRLL R DEYNVE +D PGAF CYLD GLARTTTG +VFGA+K
Sbjct: 105 LARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
Query: 75 GAVDGGLNVPHSIKRFPGYDAEWKK 1
GAVDGGL++PHS KRFPGYD+E K+
Sbjct: 165 GAVDGGLSIPHSTKRFPGYDSESKE 189
Score = 44.4 bits (100), Expect = 3e-04
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MGFVKVVKNK YFKRYQVK R +GK
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGK 27
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 161 bits (391), Expect = 2e-39
Identities = 69/86 (80%), Positives = 82/86 (95%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD +VCAA
Sbjct: 19 KFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAA 78
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
++HELP+YGVKVGLTNYAAAY TGLL
Sbjct: 79 YAHELPKYGVKVGLTNYAAAYCTGLL 104
Score = 112 bits (270), Expect = 8e-25
Identities = 53/85 (62%), Positives = 61/85 (71%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARRLL R DEYNVE +D PGAF CYLD GLARTTTG +VFGA+K
Sbjct: 105 LARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
Query: 75 GAVDGGLNVPHSIKRFPGYDAEWKK 1
GAVDGGL++PHS KRFPGYD+E K+
Sbjct: 165 GAVDGGLSIPHSTKRFPGYDSESKE 189
Score = 44.4 bits (100), Expect = 3e-04
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MGFVKVVKNK YFKRYQVK R +GK
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGK 27
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 161 bits (391), Expect = 2e-39
Identities = 69/86 (80%), Positives = 82/86 (95%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD +VCAA
Sbjct: 19 KFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAA 78
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
++HELP+YGVKVGLTNYAAAY TGLL
Sbjct: 79 YAHELPKYGVKVGLTNYAAAYCTGLL 104
Score = 112 bits (270), Expect = 8e-25
Identities = 53/85 (62%), Positives = 61/85 (71%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARRLL R DEYNVE +D PGAF CYLD GLARTTTG +VFGA+K
Sbjct: 105 LARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
Query: 75 GAVDGGLNVPHSIKRFPGYDAEWKK 1
GAVDGGL++PHS KRFPGYD+E K+
Sbjct: 165 GAVDGGLSIPHSTKRFPGYDSESKE 189
Score = 44.4 bits (100), Expect = 3e-04
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MGFVKVVKNK YFKRYQVK R +GK
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGK 27
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 161 bits (391), Expect = 2e-39
Identities = 69/86 (80%), Positives = 82/86 (95%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD +VCAA
Sbjct: 19 KFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAA 78
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
++HELP+YGVKVGLTNYAAAY TGLL
Sbjct: 79 YAHELPKYGVKVGLTNYAAAYCTGLL 104
Score = 112 bits (270), Expect = 8e-25
Identities = 53/85 (62%), Positives = 61/85 (71%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARRLL R DEYNVE +D PGAF CYLD GLARTTTG +VFGA+K
Sbjct: 105 LARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
Query: 75 GAVDGGLNVPHSIKRFPGYDAEWKK 1
GAVDGGL++PHS KRFPGYD+E K+
Sbjct: 165 GAVDGGLSIPHSTKRFPGYDSESKE 189
Score = 44.4 bits (100), Expect = 3e-04
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MGFVKVVKNK YFKRYQVK R +GK
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGK 27
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 161 bits (391), Expect = 2e-39
Identities = 69/86 (80%), Positives = 82/86 (95%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD +VCAA
Sbjct: 26 KFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAA 85
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
++HELP+YGVKVGLTNYAAAY TGLL
Sbjct: 86 YAHELPKYGVKVGLTNYAAAYCTGLL 111
Score = 112 bits (270), Expect = 8e-25
Identities = 53/85 (62%), Positives = 61/85 (71%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARRLL R DEYNVE +D PGAF CYLD GLARTTTG +VFGA+K
Sbjct: 112 LARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 171
Query: 75 GAVDGGLNVPHSIKRFPGYDAEWKK 1
GAVDGGL++PHS KRFPGYD+E K+
Sbjct: 172 GAVDGGLSIPHSTKRFPGYDSESKE 196
Score = 44.4 bits (100), Expect = 3e-04
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MGFVKVVKNK YFKRYQVK R +GK
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGK 34
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 159 bits (386), Expect = 7e-39
Identities = 68/86 (79%), Positives = 81/86 (94%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD +VCA
Sbjct: 19 KFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAR 78
Query: 332 HSHELPRYGVKVGLTNYAAAYSTGLL 255
++HELP+YGVKVGLTNYAAAY TGLL
Sbjct: 79 YAHELPKYGVKVGLTNYAAAYCTGLL 104
Score = 112 bits (270), Expect = 8e-25
Identities = 53/85 (62%), Positives = 61/85 (71%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARRLL R DEYNVE +D PGAF CYLD GLARTTTG +VFGA+K
Sbjct: 105 LARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 164
Query: 75 GAVDGGLNVPHSIKRFPGYDAEWKK 1
GAVDGGL++PHS KRFPGYD+E K+
Sbjct: 165 GAVDGGLSIPHSTKRFPGYDSESKE 189
Score = 44.4 bits (100), Expect = 3e-04
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MGFVKVVKNK YFKRYQVK R +GK
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGK 27
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 151 bits (366), Expect = 2e-36
Identities = 64/80 (80%), Positives = 77/80 (96%)
Frame = -2
Query: 512 KIKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHLVCAA 333
K +RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD +VCAA
Sbjct: 19 KFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAA 78
Query: 332 HSHELPRYGVKVGLTNYAAA 273
++HELP+YGVKVGLTNYAAA
Sbjct: 79 YAHELPKYGVKVGLTNYAAA 98
Score = 44.4 bits (100), Expect = 3e-04
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -3
Query: 565 MGFVKVVKNKQYFKRYQVKSRGVVKGK 485
MGFVKVVKNK YFKRYQVK R +GK
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGK 27
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 96.3 bits (229), Expect = 8e-20
Identities = 40/54 (74%), Positives = 51/54 (94%)
Frame = -2
Query: 416 LIVRLSNKDVTCQVAYSRIEGDHLVCAAHSHELPRYGVKVGLTNYAAAYSTGLL 255
+IVR++N+D+ CQ+AY+RIEGD +VCAA++HELP+YGVKVGLTNYAAAY TGLL
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLL 54
Score = 91.1 bits (216), Expect = 3e-18
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = -1
Query: 255 IARRLLQRXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 76
+ARRLL R DEYNVE +D PGAF CYLD GLARTTTG +VFGA+K
Sbjct: 55 LARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALK 114
Query: 75 GAVDGGLNVPH 43
GAVDGGL++PH
Sbjct: 115 GAVDGGLSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 67.3 bits (157), Expect = 4e-11
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = -1
Query: 111 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAEWKK 1
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+E K+
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKE 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,240,287
Number of Sequences: 237096
Number of extensions: 1979983
Number of successful extensions: 3631
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3630
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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