Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00126
(612 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 2.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 7.2
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 21 7.2
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.2
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.5
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = -2
Query: 485 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAY 369
TD RK ++ +++ K ++ ++V + N+D +AY
Sbjct: 288 TDTLIRKYIIPKEQVKEDSLYTNIVVDIRNEDCGSAIAY 326
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 40 GMRNIEATVNSTLHSSKD 93
GM NIE + +T +SSK+
Sbjct: 193 GMNNIETYIVNTNYSSKN 210
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -2
Query: 398 NKDVTCQVAYSRIEGDHLVCAAHSHELPRYG 306
++ VTC + + + + CAA+ H L + G
Sbjct: 16 HRRVTCDLLSFKGQVNDSACAANCHSLGKAG 46
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 7.2
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 4 FPFCIIARESFDGMRNIEATVNSTLHSSKDTSTSSGA 114
FP I + G++ I + +S LHS++ SS +
Sbjct: 918 FPHHQIQVSTSAGLQTIRLSGHSVLHSAQSVVASSAS 954
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 40 GMRNIEATVNSTLHSSK 90
GM NIE + +T +SSK
Sbjct: 193 GMNNIETYIVNTNYSSK 209
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -2
Query: 485 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 393
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -2
Query: 485 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 393
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -2
Query: 485 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 393
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -2
Query: 485 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 393
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -2
Query: 485 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 393
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 217 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 247
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -2
Query: 485 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 393
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYKEKDRRYEKLHNE 258
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,262
Number of Sequences: 438
Number of extensions: 3613
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -