BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00124
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 130 1e-30
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 130 1e-30
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 130 2e-30
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 128 4e-30
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 128 6e-30
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 127 1e-29
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 105 4e-23
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 95 5e-20
04_01_0275 + 3648866-3649951 29 3.1
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 28 7.1
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 7.1
07_03_0149 - 14452654-14452666,14452943-14454699,14454886-144549... 28 7.1
08_02_0039 - 11512553-11512822,11512920-11513171,11513784-115139... 28 9.4
07_03_0944 + 22787933-22789906 28 9.4
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023... 28 9.4
02_05_0552 - 29911280-29912541,29912633-29912762 28 9.4
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 130 bits (314), Expect = 1e-30
Identities = 61/84 (72%), Positives = 73/84 (86%)
Frame = +2
Query: 512 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFD 691
R E++ AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD
Sbjct: 148 RKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 207
Query: 692 DAIAELDTLNEDSYKDSTLIMQLL 763
+AI+ELDTL+E+SYKDSTLIMQLL
Sbjct: 208 EAISELDTLSEESYKDSTLIMQLL 231
Score = 116 bits (279), Expect = 2e-26
Identities = 54/86 (62%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 VGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKA 428
+GARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P +
Sbjct: 60 IGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSS 119
Query: 429 SNPESKVFYLKMKGDYYRYLAEVATG 506
+ PESKVFYLKMKGDYYRYLAE TG
Sbjct: 120 TAPESKVFYLKMKGDYYRYLAEFKTG 145
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Frame = +1
Query: 88 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNV 255
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNV 59
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 130 bits (314), Expect = 1e-30
Identities = 61/84 (72%), Positives = 73/84 (86%)
Frame = +2
Query: 512 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFD 691
R E++ AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD
Sbjct: 366 RKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 425
Query: 692 DAIAELDTLNEDSYKDSTLIMQLL 763
+AI+ELDTL+E+SYKDSTLIMQLL
Sbjct: 426 EAISELDTLSEESYKDSTLIMQLL 449
Score = 118 bits (285), Expect = 4e-27
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 VGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKA 428
+GARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P +
Sbjct: 278 IGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSS 337
Query: 429 SNPESKVFYLKMKGDYYRYLAEVATG 506
+ PESKVFYLKMKGDYYRYLAE TG
Sbjct: 338 TAPESKVFYLKMKGDYYRYLAEFKTG 363
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +1
Query: 88 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNV 255
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNV 277
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 130 bits (313), Expect = 2e-30
Identities = 62/84 (73%), Positives = 70/84 (83%)
Frame = +2
Query: 512 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFD 691
R E + AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNSPDKAC LAKQAFD
Sbjct: 142 RKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFD 201
Query: 692 DAIAELDTLNEDSYKDSTLIMQLL 763
+AI+ELDTL E+SYKDSTLIMQLL
Sbjct: 202 EAISELDTLGEESYKDSTLIMQLL 225
Score = 113 bits (271), Expect = 2e-25
Identities = 53/86 (61%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 VGARRSSWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKA 428
+GARR+SWR++SSIEQK EG +E + KEYR K+E EL +IC +L LLD HL+P +
Sbjct: 54 IGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSS 113
Query: 429 SNPESKVFYLKMKGDYYRYLAEVATG 506
+ ESKVFYLKMKGDY+RYLAE TG
Sbjct: 114 TAAESKVFYLKMKGDYHRYLAEFKTG 139
Score = 58.4 bits (135), Expect = 6e-09
Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = +1
Query: 103 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNV 255
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNV 53
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 128 bits (310), Expect = 4e-30
Identities = 62/84 (73%), Positives = 70/84 (83%)
Frame = +2
Query: 512 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFD 691
R E++ AY+ A +I+ A + THPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD
Sbjct: 147 RKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206
Query: 692 DAIAELDTLNEDSYKDSTLIMQLL 763
DAIAELDTL E+SYKDSTLIMQLL
Sbjct: 207 DAIAELDTLGEESYKDSTLIMQLL 230
Score = 110 bits (264), Expect = 1e-24
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 VGARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKA 428
+GARR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P A
Sbjct: 59 IGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSA 118
Query: 429 SNPESKVFYLKMKGDYYRYLAEVATG 506
+ ESKVFYLKMKGDY+RYLAE +G
Sbjct: 119 TAAESKVFYLKMKGDYHRYLAEFKSG 144
Score = 58.8 bits (136), Expect = 4e-09
Identities = 33/57 (57%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Frame = +1
Query: 91 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNV 255
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNV 58
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 128 bits (308), Expect = 6e-30
Identities = 60/84 (71%), Positives = 70/84 (83%)
Frame = +2
Query: 512 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFD 691
R E + AY+ A +I+ A + PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD
Sbjct: 125 RKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 184
Query: 692 DAIAELDTLNEDSYKDSTLIMQLL 763
+AI+ELD+L E+SYKDSTLIMQLL
Sbjct: 185 EAISELDSLGEESYKDSTLIMQLL 208
Score = 108 bits (260), Expect = 4e-24
Identities = 52/87 (59%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 VGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKELREICYDVLGLLDKHLIPKA 428
+GARR+SWR+ISSIEQK EG A + YR K+E EL IC +L LLD HL+P A
Sbjct: 37 IGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAELARICDGILALLDSHLVPSA 96
Query: 429 SNPESKVFYLKMKGDYYRYLAEVATGE 509
ESKVFYLKMKGDY+RYLAE +G+
Sbjct: 97 GAAESKVFYLKMKGDYHRYLAEFKSGD 123
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 199 GVELSNEERNLLSVAYKNV 255
G EL+ EERNLLSVAYKNV
Sbjct: 18 GEELTVEERNLLSVAYKNV 36
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 127 bits (306), Expect = 1e-29
Identities = 60/84 (71%), Positives = 70/84 (83%)
Frame = +2
Query: 512 RHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFD 691
R + + AYQ A +I+ ++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD
Sbjct: 152 RKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFD 211
Query: 692 DAIAELDTLNEDSYKDSTLIMQLL 763
+AI+ELDTL E+SYKDSTLIMQLL
Sbjct: 212 EAISELDTLGEESYKDSTLIMQLL 235
Score = 103 bits (247), Expect = 2e-22
Identities = 49/86 (56%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 VGARRSSWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKA 428
+GARR+SWR++SSIEQK EG + A+ YR +VE EL IC +L LLD+ L+P A
Sbjct: 64 IGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAA 123
Query: 429 SNPESKVFYLKMKGDYYRYLAEVATG 506
+ ++KVFYLKMKGDY+RYLAE TG
Sbjct: 124 AAVDAKVFYLKMKGDYHRYLAEFKTG 149
Score = 58.0 bits (134), Expect = 8e-09
Identities = 32/54 (59%), Positives = 39/54 (72%), Gaps = 5/54 (9%)
Frame = +1
Query: 109 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNV 255
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNV 63
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 105 bits (252), Expect = 4e-23
Identities = 49/70 (70%), Positives = 60/70 (85%)
Frame = +2
Query: 554 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 733
A + ++ + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205
Query: 734 KDSTLIMQLL 763
KDSTLIMQLL
Sbjct: 206 KDSTLIMQLL 215
Score = 60.9 bits (141), Expect = 1e-09
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 VGARRSSWRVISSIEQK--TEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKA 428
+GA+R++ R+I SIE K T+G E + EYR KVE E+ +IC DV+ ++DK
Sbjct: 31 IGAKRAAMRIIGSIELKEETKGKESHVRQTAEYRRKVEAEMDKICCDVINIIDK------ 84
Query: 429 SNPESKVFYLKMKGDYYRYLAEVATGEPDI 518
KGDYYRYLAE TG I
Sbjct: 85 ------------KGDYYRYLAEFKTGTEKI 102
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 166 MAAAMKEVTETGVELSNEERNLLSVAYKNV 255
M AM V + L+ EERNLLSV YKN+
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNL 30
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 95.1 bits (226), Expect = 5e-20
Identities = 41/84 (48%), Positives = 59/84 (70%)
Frame = +3
Query: 255 VGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 434
+GARR+SWR++ S+EQK ++ Y+ KVE ELR +C +VL ++ H +P A++
Sbjct: 53 IGARRASWRILESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANS 112
Query: 435 PESKVFYLKMKGDYYRYLAEVATG 506
E+ VF+ KMKGDYYRYLAE +TG
Sbjct: 113 GENVVFFYKMKGDYYRYLAEFSTG 136
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +2
Query: 638 EILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLE 766
EI+NSP++A Q+AKQA D+A AE+++ + YKDS L+MQLL+
Sbjct: 163 EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLK 205
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +1
Query: 106 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYK 249
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFK 50
>04_01_0275 + 3648866-3649951
Length = 361
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 249 ECVGARRSSWRVISSIEQKTEGSERKQQMAKEYR--VKVEKELREICYDVL 395
EC RRS W +ISS+ +K E + Y ++V ++R++ +D +
Sbjct: 14 ECTRDRRS-WMLISSLGKKLASEEEWMEYEYHYSRGIRVSPDIRKVLFDCI 63
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 405 DKHLIPKASNPESKVFYLKMKGDYYRYLAE-VATGEPDIL 521
D+ +I + + E + F LK DY++YL+E ++TG P L
Sbjct: 1590 DRFIIKQVTKTELESF-LKFGLDYFKYLSESISTGSPTSL 1628
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +3
Query: 366 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 470
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>07_03_0149 -
14452654-14452666,14452943-14454699,14454886-14454990,
14455808-14455978,14456309-14456641,14456900-14457492,
14458864-14458906
Length = 1004
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 220 ERNLLSVAYKNV*VPDGHHGVSFPQLNR 303
+R S NV VP G +G+SFP NR
Sbjct: 21 QRKASSEVNANVFVPGGQNGISFPASNR 48
>08_02_0039 -
11512553-11512822,11512920-11513171,11513784-11513951,
11519429-11519622,11519774-11519795,11519928-11520239,
11520497-11520826,11520855-11521069,11523106-11523151,
11523207-11523290
Length = 630
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 220 ERNLLSVAYKNV*VPDGHHGVSFPQLNR 303
+R S A NV +P G +G+SFP NR
Sbjct: 50 QRKASSEANANVFMPGGPNGISFPASNR 77
>07_03_0944 + 22787933-22789906
Length = 657
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 469 EITTGTLQKW--PQENQTFCCRGFTESIPR-CF*NQQGENAAHTPHKAGSGV 615
E + G + W P + +T C+ R CF + H PH +G+G+
Sbjct: 296 EFSHGVFESWLHPSQYRTRLCKEGAACARRICFFAHDEDELRHVPHNSGAGL 347
>03_04_0011 +
16398093-16398170,16401321-16401806,16401892-16402380,
16402810-16403466
Length = 569
Score = 27.9 bits (59), Expect = 9.4
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +3
Query: 312 GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP-KASNPESKVFYLKMKGDYYRYL 488
G ERKQ ++K +RV+ L I D + P A ++ F + + R +
Sbjct: 424 GDERKQHLSKTFRVRGIPSLVAIGADGRTVARDAKTPLTAHGADAFPFTEERLLEMERKI 483
Query: 489 AEVATGEPDILL*RIHRKHTKMLLKSARRKCSPHTP*GWVW 611
E+A G P L +H +H +L + C G W
Sbjct: 484 DEMAKGWPGKLKHELHDEHELVLTRCTTYGCDGCDEMGSSW 524
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 34 SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 180
S T H SP+PSS +EEL++R +L AE +R M AA+
Sbjct: 50 SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,918,468
Number of Sequences: 37544
Number of extensions: 443739
Number of successful extensions: 1389
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -