Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00122
(770 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 9e-38
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 2e-25
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 5e-18
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 86 3e-17
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 8e-17
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 83 3e-16
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 81 1e-15
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 69 6e-12
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 66 2e-11
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 58 8e-09
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 49 4e-06
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 49 4e-06
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 49 5e-06
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 48 1e-05
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 46 3e-05
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 46 4e-05
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 46 4e-05
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 45 8e-05
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 44 1e-04
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 44 2e-04
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 42 4e-04
SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059) 42 4e-04
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 41 0.001
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 41 0.001
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 40 0.003
SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 38 0.009
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 36 0.027
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 36 0.036
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 36 0.036
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 36 0.048
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 36 0.048
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 36 0.048
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 36 0.048
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 35 0.063
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.084
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 34 0.11
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 34 0.15
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 33 0.25
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 33 0.25
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 33 0.34
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 32 0.45
SB_52747| Best HMM Match : Semialdhyde_dh (HMM E-Value=6.5) 32 0.59
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 32 0.59
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 32 0.59
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.0
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 31 1.4
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 30 1.8
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 30 2.4
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 30 2.4
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 30 2.4
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_56000| Best HMM Match : HSA (HMM E-Value=2.8) 28 7.3
SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07) 28 7.3
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 28 7.3
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 28 7.3
SB_55623| Best HMM Match : ResIII (HMM E-Value=0.17) 28 9.6
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 28 9.6
SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 28 9.6
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 154 bits (373), Expect = 9e-38
Identities = 69/77 (89%), Positives = 72/77 (93%)
Frame = +2
Query: 254 KDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 433
+DYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR
Sbjct: 5988 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRM 6047
Query: 434 DPATINELRKMKQEPVK 484
D T EL+KMKQEPVK
Sbjct: 6048 DENTKRELQKMKQEPVK 6064
Score = 135 bits (327), Expect = 3e-32
Identities = 63/64 (98%), Positives = 64/64 (100%)
Frame = +3
Query: 66 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 245
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT
Sbjct: 5925 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 5984
Query: 246 AGQK 257
AGQ+
Sbjct: 5985 AGQE 5988
Score = 75.8 bits (178), Expect = 4e-14
Identities = 35/43 (81%), Positives = 40/43 (93%)
Frame = +3
Query: 510 KINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL 638
KI+A+AYLECSAK+K+GVREVFETATRAALQ KKKKK +C LL
Sbjct: 6074 KISAYAYLECSAKTKDGVREVFETATRAALQTKKKKKGKCVLL 6116
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 113 bits (271), Expect = 2e-25
Identities = 48/81 (59%), Positives = 59/81 (72%)
Frame = +2
Query: 254 KDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 433
+DYDRLRPLSYP TDV L+CFSV SP S EN+ EKW PE+ H CP P +LVG + DLR+
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQVDLRD 121
Query: 434 DPATINELRKMKQEPVKPQKA 496
D TI +L K KQ+P+ + A
Sbjct: 122 DQGTIEKLSKNKQKPIAVEAA 142
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQK 257
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQ+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +3
Query: 510 KINAFAYLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 638
++ A Y+ECSA +++G++ VF+ A AAL+ + +KK +C LL
Sbjct: 148 ELRAVKYVECSALTQKGLKNVFDEAILAALEPPEPQKKKKCRLL 191
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 88.6 bits (210), Expect = 5e-18
Identities = 39/76 (51%), Positives = 49/76 (64%)
Frame = +2
Query: 254 KDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 433
+DYDRLRPLSYP TDV L+CF + S S ENI KW PE+ H P P ILVGNK+DLR+
Sbjct: 64 EDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKILVGNKRDLRS 123
Query: 434 DPATINELRKMKQEPV 481
+ ++P+
Sbjct: 124 AQQNTSLSNHRSRDPI 139
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQK 257
KLV+VGDG GK+ LI + + FP Y+PTVF+NY ++I +DGK + LWDTAGQ+
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQE 64
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 85.8 bits (203), Expect = 3e-17
Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 254 KDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 433
+D+D LRPL Y DV ++CFSV SP S N+ KW PE++ F P PIILVG DL++
Sbjct: 77 EDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTHSDLKD 136
Query: 434 DPATINELRKMKQEPVKPQKA-GLWLKD*RVC 526
+ EL + +P+ +KA GL K VC
Sbjct: 137 CYKILTELSQQDSQPISVKKAEGLVKKTRCVC 168
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQK 257
K VIVGDG GKT LL+ + D FP YVPT F+ Y +EV+ K + DTAGQ+
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQE 77
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 84.6 bits (200), Expect = 8e-17
Identities = 34/59 (57%), Positives = 44/59 (74%)
Frame = +2
Query: 254 KDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 430
+D+DRLRPL YP+TD+ L+CF + S EN+ +W PE+ HF P VP +LVGNKKDLR
Sbjct: 66 EDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHFSPGVPRVLVGNKKDLR 124
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAG 251
KL IVGDGA GKT L I + + FP Y+PT ++ D VDG + + L+D+AG
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAG 64
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 82.6 bits (195), Expect = 3e-16
Identities = 37/88 (42%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 KDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 433
+DYD +RPLSY + D++L+CF + P + ++I EKW EV CPN P++LVG K+DLR+
Sbjct: 291 EDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVLLVGCKQDLRS 350
Query: 434 DPATINEL-RKMKQEPVKPQKAGLWLKD 514
+ +++L K+ Q+PV + LK+
Sbjct: 351 EVNIVSKLASKVCQQPVTSLEVPAELKE 378
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +3
Query: 63 PMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 242
P IR +++VGD CGKT LL + ++QF E Y TVF + +EVDG+++EL LWD
Sbjct: 227 PNGQIRIPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWD 286
Query: 243 TAGQK 257
T+G +
Sbjct: 287 TSGHE 291
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 80.6 bits (190), Expect = 1e-15
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = +2
Query: 257 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 436
D +LRPL Y DTDV ++CF + +P S +N+ W PE+KH+ P P+++VGNKKD+R +
Sbjct: 81 DLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELKHYMPETPVLVVGNKKDMRTN 140
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +3
Query: 78 RKKLVIVGDGACGKTCLLI-VFSKDQFP-EVY------VPTVFENYVADIEVDGKQVELA 233
R KL +VGD GKTC+L F + Q P +VY +P V E++ + D +
Sbjct: 8 RLKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVT 67
Query: 234 LWDT 245
WDT
Sbjct: 68 YWDT 71
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 528 YLECSAKSKEGVREVFETATRAALQVKKKKKT 623
Y E S + EG+REV TA R A+Q + + +T
Sbjct: 224 YRESSGYTGEGIREVVGTAVRLAVQHRLQTQT 255
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 68.5 bits (160), Expect = 6e-12
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +2
Query: 260 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG---NKKDLR 430
YD+LR YPDTDV L+CFSV SL+++ +W PE++ FCP P +L+G N + L
Sbjct: 128 YDQLRAELYPDTDVFLVCFSVTLQQSLKDVVNRWVPELRRFCPVTPFLLIGTHINWRLLS 187
Query: 431 ND-PATINELRKMKQEPVKPQKAGLW 505
D ATI+ R+ P+ P+ ++
Sbjct: 188 EDRAATIDPARR----PIFPETGAMY 209
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 257 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 430
+YDRLRPL+Y +D+IL+CF + + + E I KW PE P +L+GNK D+R
Sbjct: 64 EYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRVLIGNKNDIR 121
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 66 MAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 242
MA+ RK K+V+ GD GKT LI ++++ PT F NY +EV ++ L LWD
Sbjct: 1 MASERKLKVVLTGDNNVGKTSFLINLTQNELEGT--PTAFANYELGLEVGSQKFLLDLWD 58
Query: 243 TAG 251
T G
Sbjct: 59 TEG 61
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 65.7 bits (153), Expect = 4e-11
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Frame = +2
Query: 197 RHRSGWKTSGTGSVGYR-WPK--DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTP 367
R R+ + G SV R W D+ R +Y + VI++CF++++P S +++ W P
Sbjct: 71 RDRANFTIDGV-SVSLRLWDTFGDHSMNRRFAYQNAHVIVLCFAINTPSSFKDVNAVWYP 129
Query: 368 EVKHFCPNVPIILVGNKKDLRN 433
E+K +CP VPIILVG K D R+
Sbjct: 130 EIKKYCPRVPIILVGTKSDWRS 151
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 257
K+++VGD GKTCL+ F+K FP PT+ ++ + ++VDG++V+L +WDTAGQ+
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQE 67
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +2
Query: 284 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 436
+ DTDV +CFSV DS ++ KW EVK+ PN PII+VG K DLR +
Sbjct: 86 FSDTDVFCLCFSVGDMDSFRHVENKWYAEVKNCSPNSPIIVVGTKTDLREN 136
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLI--VFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 242
++VI+GD GKTCLL+ + + ++ ++ NYVA+I VDGK +L L D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANIIVDGKVYKLELCD 74
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 58.0 bits (134), Expect = 8e-09
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 257
KL+++GD GK+ LL+ F+ D F Y+ T+ ++ + + VDGK ++L +WDTAGQ+
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQE 68
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +2
Query: 263 DRLRPLS---YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDL 427
+R R L+ Y I++ + V+ ++ ++ + W EV + C V ILVGNK DL
Sbjct: 68 ERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQ-WLEEVSEYACEGVNTILVGNKCDL 125
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 57.6 bits (133), Expect = 1e-08
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2
Query: 359 WTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPV 481
W PEV H CPN PI+LVG K DLR+D TI++L++ K P+
Sbjct: 576 WYPEVSHHCPNTPIVLVGTKLDLRDDKETIDKLKEKKLGPI 616
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +2
Query: 263 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 418
D +RPL+Y D+ ++CF V + S EN+ KW PE++ + VP++LVG K
Sbjct: 87 DYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEIRLYEKKVPLMLVGLK 138
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQK 257
K++I+GD GKTCL +FPE T+ + + +E++G+ V+L LWDTAGQ+
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 284 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKH--FCPNVPIILVGNKKDL 427
Y + + ++ + + S E + W E +H + +VP IL+GNK DL
Sbjct: 117 YRNVNAVVFMYDITRKCSFEALTT-WIVEYRHHAYSGDVPKILIGNKCDL 165
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 251
K+V++G G GK+ L + F QF E Y PT+ + Y +IEVD L + DTAG
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAG 60
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 257
KL+I+G+ A GKT L ++ D F +V TV ++ V + + K+V+L +WDTAGQ+
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQE 81
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQF-PEVYVPTVFENYVADIEVDGKQVELALWDTAGQK 257
K++IVG+ GK+ LL+ F+ D F P++ + V + V+G + +LA+WDTAGQ+
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQK 257
K++++GD GK+ L+ F D+F T+ + ++ D ++DGK+V+L LWDTAG++
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEE 70
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQK 257
KLV+VG G GK+ L I F + F Y PT+ ++Y +D + L + DTAGQ+
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQE 70
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 251
K+V VGD GKT L + FP ++ ++F+ Y +E+DGK+ + L DT G
Sbjct: 11 KVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDTPG 66
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 299 VILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 430
V L+CF + + +S NI W P V +VP +LVGNK +LR
Sbjct: 83 VFLLCFDIANRESFANIESTWLPHVNLETSDVPKVLVGNKMELR 126
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQK 257
K+V++GD GK+ LL F++++F T+ + I+V+GK ++ +WDTAGQ+
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQE 72
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +2
Query: 353 EKWTPEVK-HFCPNVPIILVGNKKDLRN 433
E+W EV+ H P + ++LVGNK DL++
Sbjct: 104 ERWLLEVREHADPTIVVMLVGNKCDLKH 131
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 251
K+ I+G G GKT LL F +F E +VPTV + ++ + +DG + DTAG
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDTAG 69
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 PESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGK-Q 221
P P + +++++GD GK+ LL F++ QF E PTV + +V +E+ G +
Sbjct: 3 PARMKPKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVR 62
Query: 222 VELALWDTAGQK 257
++L +WDTAGQ+
Sbjct: 63 IKLQIWDTAGQE 74
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQK 257
KLV++G+ A GK+ L++ F K QF E T+ ++ + +D V+ +WDTAGQ+
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 260 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDL 427
Y L P+ Y ++ + + + D+ + W E+ + PN+ I L GNK DL
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNQDTFARA-KTWVKELQRQASPNIVIALSGNKADL 138
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQK 257
K+V +GD GK+ L F D F E Y PT+ +++ + +D +V L +WDTAGQ+
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQE 223
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +3
Query: 81 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 254
+K+ ++G + GK+ L I F + QF + Y PT+ + +I+ G++ L L DTAGQ
Sbjct: 7 RKIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDTAGQ 64
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 257
K+V +GD GK+ L F DQ+ + T+ ++ + + V+G+ + + LWDTAGQ+
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQE 956
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 22/80 (27%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFS---------------------KDQFPEVYVPTVFENY-VA 197
KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 198 DIEVDGKQVELALWDTAGQK 257
IE+DGK ++L +WDTAGQ+
Sbjct: 70 TIELDGKTIKLQIWDTAGQE 89
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 302 ILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDL 427
I++ + V +S N+ ++W E+ + C NV +LVGNK DL
Sbjct: 105 IIVVYDVTDQESFNNV-KQWLQEIDRYACENVNKLLVGNKCDL 146
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 257
K+V+ GD A GK+ ++ +++F T+ ++ + + VDGK L LWDTAGQ+
Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQE 502
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 296 DVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRNDPATINE 454
D +L+ + V S ++ + W ++ C VPI+L GNK D+R A N+
Sbjct: 516 DGVLLLYDVTCETSFLDVRD-WVEAIEESCSKPVPIMLCGNKIDIRQSAAAENK 568
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 254
K+VI+G+ GK+ L + F +F Y T+ Y D EV G+ V + L DTAG+
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGE 919
>SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059)
Length = 141
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 359 WTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEP 478
W PE+K CP VP +L+G K DLR D A + EP
Sbjct: 1 WAPELKEACPGVPYLLIGCKNDLRTDSALELNFLSVPGEP 40
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 513 INAFAYLECSAKSKEGVREVFETATRAALQVKKKKKT 623
I A Y+EC AK + ++EVF+ A A L + T
Sbjct: 58 IGARQYVECCAKMRWNIKEVFQQAAEAILSKEDSNNT 94
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 PESSGPMAAI-RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 224
PE S A R KL +VGD GKT LL K EV +FE V D+ +
Sbjct: 50 PEQSDTHATSERYKLSVVGDAESGKTSLLNALVKSDI-EVEETVIFEECVTDVTSGDSNL 108
Query: 225 ELALWDTA 248
E LWD++
Sbjct: 109 EFMLWDSS 116
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 254
++ ++GD GKT LL+ F +F Y PT+ + Y I +D V L + DTA +
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASR 63
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDT 245
K+V++GD GK+ LL F++++F T+ E I+VDGK ++ +WDT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI-EVDGKQVELALWDTAGQK 257
K+++VGD GKT L+ F+K F + TV + + ++ G +V+L WDTAGQ+
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQE 71
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 284 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRNDPATIN 451
Y + D +++ F + + + +IP+ W V+ + N+ +LVGNK DL+ +N
Sbjct: 81 YRNADAVILVFDITNRGTFASIPQ-WLMNVQKYTNKNILKVLVGNKTDLKGASRKVN 136
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTA 248
K+V++GD GK+ LL ++K++F T+ E ++E++GK V +WDTA
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 269 LRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 433
LR Y ++ F V S + +N+P W +++ C N+PI+L GNK D+++
Sbjct: 97 LRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WHRDLERVCENIPIVLCGNKVDIKD 150
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 96 VGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQK 257
VGDG GKT + +F + Y+ T+ E + ++ +WDTAGQ+
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQE 92
>SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 38.3 bits (85), Expect = 0.007
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +2
Query: 254 KDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEK 358
++Y+ +R Y DTDV L+CF + +P SL+++ +K
Sbjct: 3 ENYESIRRQMYLDTDVFLVCFDIGNPSSLQSVIDK 37
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 37.9 bits (84), Expect = 0.009
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 179
KL+++GD GKTC+L FS D F ++ T+
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK-QVELALWDTAG 251
++V++G G GKT L+ F F E Y PTV + Y + + L + DTAG
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAG 165
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 260 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 427
+ ++ L+ + D ++ +SVD SL+ E V VP++LVGNK DL
Sbjct: 169 FPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDL 224
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 102 DGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQK 257
DG GK+ L+ F +F T+ ++ D+++DG+ L +WDTAGQ+
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQE 271
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 260 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-----NVPIILVGNKKD 424
+ LR Y +D+ L+ ++VD S N+ W E ++ N P IL+GNK D
Sbjct: 273 FKSLRTPFYRGSDLCLLVYAVDDAKSFTNL-SMWKKEFLYYADVRDQDNFPFILLGNKVD 331
Query: 425 L 427
+
Sbjct: 332 V 332
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 35.9 bits (79), Expect = 0.036
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV---FE---------NYVADIEVDGKQVE 227
K + +GD GKT LL ++ F +VPT+ F N + G+++
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIH 167
Query: 228 LALWDTAGQK 257
L LWDTAGQ+
Sbjct: 168 LQLWDTAGQE 177
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 245
K+ I+G A GKT L+ K F ++PT+ + + + DG + L DT
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTIDDYIIHALNQDGVHYNVCLVDT 242
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 35.5 bits (78), Expect = 0.048
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAG 251
K+V++G+ GKT L ++ F T+ ++ +++ KQV L++WDTAG
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAG 69
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 35.5 bits (78), Expect = 0.048
Identities = 21/83 (25%), Positives = 44/83 (53%)
Frame = +3
Query: 3 RLKKVSIKPIFRRN*PESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVF 182
+++K+S + + + P+ S + R +V G + GKT L++ F F + Y PT+
Sbjct: 4 KIQKISQQRELQSSSPKDS-ETSLRRFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE 62
Query: 183 ENYVADIEVDGKQVELALWDTAG 251
+ ++ + + + EL + DT+G
Sbjct: 63 DFFIKHVFFNNETYELQIIDTSG 85
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 35.5 bits (78), Expect = 0.048
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 284 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 424
Y T +++ + V S D+ N+ ++W E+ C +V ILVGNK D
Sbjct: 47 YRGTHGVIVVYDVTSADTFVNV-KRWLHEIDQNCDDVIRILVGNKDD 92
Score = 34.7 bits (76), Expect = 0.084
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 153 FPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQK 257
F Y+ T+ ++ + I +DG++V+L +WDTAGQ+
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQE 37
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 35.5 bits (78), Expect = 0.048
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 275 PLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKD 424
PL Y ++ F V S E +P W +V+ C + +P++LVGNK D
Sbjct: 40 PLIYRALSGAVIVFDVTDRKSFERVPT-WLDKVQEHCGHEIPVVLVGNKTD 89
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 35.1 bits (77), Expect = 0.063
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY 191
K+V++G G GK+ L + F QF E Y PT+ + Y
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFY 40
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 34.7 bits (76), Expect = 0.084
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 87 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 248
LV++G GK+ LL+ F +F Y PT+ Y +D L + DTA
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTA 183
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 305 LMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND-PATINELRKMKQE 475
L+ + + S ++ ++ W + + PN+ IILVGNKKDL D T E + QE
Sbjct: 172 LLVYDISSRETFNSLTN-WLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQE 229
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 201 IEVDGKQVELALWDTAGQK 257
+ V GK V+L +WDTAGQ+
Sbjct: 137 VNVGGKSVKLQIWDTAGQE 155
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 305 LMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 433
L+ + + + EN+ E+W E++ H N+ I+LVGNK DLR+
Sbjct: 10 LLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 52
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 66 MAAIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYVPTV 179
M +R K+++ GD GK+ L+ VF D +P+ Y TV
Sbjct: 1 MVVLRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTV 40
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 284 YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPI-ILVGNKKDLRND 436
Y + +++ + + D+ +N+ +W +V+ + P I +LVGNKKDL +
Sbjct: 116 YRSCNGVIIAYDITKCDTFKNVI-RWGEDVQKYAPENAIKLLVGNKKDLERE 166
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 248 WPKDYDRLRPLS---YPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGN 415
W +R R ++ Y +++ + + +S N+ KW EV+ + V +ILVGN
Sbjct: 374 WEAGQERFRTITSSYYRGAHGVMIVYDITKRESYNNL-HKWLMEVETYASEGVHMILVGN 432
Query: 416 KKDLRND 436
K DL D
Sbjct: 433 KIDLDTD 439
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 32.3 bits (70), Expect = 0.45
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 69 AAIRKKLVI--VGDGACGKTCLLIVFSKDQFPEVYVPTVFE 185
+A KKL I +G+G GK+ L+ F + F E YVPT+ E
Sbjct: 22 SAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEE 62
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 32.3 bits (70), Expect = 0.45
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVP-TVFENYV--ADIEVDGKQVELALWDTAGQ 254
K +I+G+ GK+CL+ F +V TV N + D K+++L + DTAGQ
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAGQ 411
Query: 255 K 257
+
Sbjct: 412 E 412
>SB_52747| Best HMM Match : Semialdhyde_dh (HMM E-Value=6.5)
Length = 144
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 66 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ---VELAL 236
MAA + + +VG G G T L + +D P V V + +++ D DG + L
Sbjct: 1 MAASARSVAVVGCGCIGITAALSILERD--PCVRVTIISDSFSPDNTTDGAAGILLPFVL 58
Query: 237 WDT 245
WDT
Sbjct: 59 WDT 61
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 31.9 bits (69), Expect = 0.59
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 87 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 254
+ ++G GK+ + +F Y P + NY +E+DG+ + L + DTAG+
Sbjct: 184 VAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLDTAGK 239
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 31.9 bits (69), Expect = 0.59
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 254
+L +VG GKT + V + QF E +PTV N +V V + +WD GQ
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNM---RKVSKGNVTIKVWDIGGQ 75
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 31.9 bits (69), Expect = 0.59
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFP--EVYVPTVFENYVADIEVDGKQVELALWDTAGQK 257
K+ + G GKT + S D+FP E + + + ++ + + K++++ LWDT G +
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGME 69
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 26.6 bits (56), Expect(2) = 1.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 210 DGKQVELALWDTAGQK 257
+G+ + L LWDTAGQ+
Sbjct: 30 NGEDIRLMLWDTAGQE 45
Score = 23.4 bits (48), Expect(2) = 1.0
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLL 131
K+V+VG+GA GK+ ++
Sbjct: 11 KVVVVGNGAVGKSSMI 26
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 203 RSGWKTSGTGSVGYRWPKDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF 382
+ G S T + ++Y +R + L F+V++ S E+I ++ ++K
Sbjct: 271 KGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDI-NQYREQIKRV 329
Query: 383 --CPNVPIILVGNKKDLRNDPATINELRKM 466
VP++LVGNK DL + ++ +++
Sbjct: 330 KDAEEVPMVLVGNKCDLPQRTVSTSDAQEL 359
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPT 176
K+VI GD GKTC+ F E Y+PT
Sbjct: 227 KIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 305 LMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 433
++ + + S N+ KW E++ H ++ IIL+GNK DL++
Sbjct: 20 VLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDLKH 62
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 305 LMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 433
++ + + S N+ KW E++ H ++ IIL+GNK DL++
Sbjct: 20 VLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDLKH 62
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 251
++ + G GKT ++ F +F E Y PTV + Y + +G + L D++G
Sbjct: 10 EIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLNTTDSSG 65
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +2
Query: 284 YPDTDVILMCFSVDSPDSLENIPEKWTPEVK-----HFCPNVPIILVGNKKDLRNDPATI 448
Y D ++ F ++ +L+ KW ++ H VP ILVGNK DL + P
Sbjct: 89 YKGADACVVLFDLERQTTLDGAI-KWKKDLDSKYKLHSRKPVPCILVGNKSDLPDRPVDK 147
Query: 449 NELRKMKQE 475
+ K+ +E
Sbjct: 148 EIIDKLCKE 156
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 ILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 436
IL+ + + + DS ++I + W ++ + PNV +L+GNK D ++
Sbjct: 5 ILLVYDITTEDSFKHISQ-WLQNIEDNASPNVCKVLLGNKLDAEDE 49
>SB_56000| Best HMM Match : HSA (HMM E-Value=2.8)
Length = 410
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 227 FHLFSIHFDVGNVILKHCRHVYFRELIL--AEHYQQTCFTACTVTDDY*LFAYR 72
FHL +H +V + RH++ R ++ A + C TA +T D LF+ R
Sbjct: 286 FHLVGMHSNVFTRTARLPRHLFHRRKVIEFALWIRDCCITAALLTRDGCLFSAR 339
>SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07)
Length = 887
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 658 SRQQHTYSREHLVFFFFLTCNAALVAVSNTSRTPSLLLAEHSRYANA 518
SR+ TYSR +FF L A+V + + P + HS+ A +
Sbjct: 20 SRRSSTYSRS--LFFVLLLVAVAIVVFFSQTSLPDFMKTSHSKIARS 64
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 84 KLVIVGDGACGKTCLLIVFSKDQFPEV-YVPTVFENYVAD 200
+L +VG G GK+ + I + K++F E+ Y +++ V D
Sbjct: 2600 RLCVVGSGGVGKSSVTIRYLKNEFTEIDYCGKLYDIEVVD 2639
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +2
Query: 284 YPDTDVILMCFSVDSPDSLENIPEKWTPE-VKHFCP----NVPIILVGNKKDLRN 433
Y D ++ F V P+S + + + W E + P N P +++GNK DL N
Sbjct: 18 YRGADCCVLVFDVTQPNSFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKIDLEN 71
>SB_55623| Best HMM Match : ResIII (HMM E-Value=0.17)
Length = 755
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 48 PESSGPMAAIRKKLVIVGDGACGKT 122
P+ SG +AA K+ + G G GKT
Sbjct: 319 PKKSGSLAATSAKMYLAGQGGSGKT 343
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +3
Query: 213 GKQVELALWDTAGQK 257
GK+++L +WDTAGQ+
Sbjct: 2 GKKIKLQIWDTAGQE 16
>SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1627
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 78 RKKLVIVGDGACGKTCLLIVFSK 146
+K LV+ GD CGKT L+ + +K
Sbjct: 383 QKPLVLYGDSGCGKTSLVAMTAK 405
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +2
Query: 392 VPIILVGNKKDLR 430
+PI+LVGNK+DLR
Sbjct: 71 IPIVLVGNKRDLR 83
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,696,201
Number of Sequences: 59808
Number of extensions: 520758
Number of successful extensions: 1601
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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