Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00122
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...   106   9e-25
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...   103   6e-24
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            45   2e-06
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   6.0  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   6.0  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   6.0  

>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score =  106 bits (254), Expect = 9e-25
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = +2

Query: 254 KDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 433
           +DYDRLRPLSYP TDV L+CFSV SP S EN+ EKW PE+ H C   P +LVG + DLR+
Sbjct: 5   EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRD 64

Query: 434 DPATINELRKMKQEPV 481
           + +T+ +L K KQ+P+
Sbjct: 65  ENSTLEKLAKNKQKPI 80



 Score = 36.7 bits (81), Expect = 8e-04
 Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = +3

Query: 510 KINAFAYLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 638
           ++ A  Y+ECSA +++G++ VF+ A  AAL+  +  KK +C  L
Sbjct: 91  ELKAVKYVECSALTQKGLKNVFDVAILAALEPPEPTKKRKCRFL 134


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score =  103 bits (247), Expect = 6e-24
 Identities = 45/68 (66%), Positives = 52/68 (76%)
 Frame = +2

Query: 254 KDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 433
           +DYDRLRPLSYP TDV L+C+SV SP S EN+  KW PE+KH CP+ PIILVG K DLR 
Sbjct: 65  EDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLRE 124

Query: 434 DPATINEL 457
           D  TI+ L
Sbjct: 125 DRETISLL 132



 Score = 82.2 bits (194), Expect = 2e-17
 Identities = 36/58 (62%), Positives = 43/58 (74%)
 Frame = +3

Query: 84  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQK 257
           K V+VGDG  GKTC+LI ++ D FP  YVPT F+NY A + VDG QV L LWDTAGQ+
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQE 65



 Score = 31.5 bits (68), Expect = 0.030
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +3

Query: 510 KINAFAYLECSAKSKEGVREVFETA 584
           KI A  Y+ECSA ++ G+++VF+ A
Sbjct: 151 KIRAVKYMECSALTQRGLKQVFDEA 175


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 45.2 bits (102), Expect = 2e-06
 Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
 Frame = +3

Query: 84  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQK 257
           KLV++G+ A GK+ L++ F K QF E    T+   ++   + +D   V+  +WDTAGQ+
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84



 Score = 35.9 bits (79), Expect = 0.001
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 260 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRN 433
           Y  L P+ Y      ++ + + + DS     + W  E+ +   PN+ I L GNK DL N
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFARA-KTWVKELQRQASPNIVIALAGNKADLAN 143


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +3

Query: 513  INAFAYLECSAKSKEGVREVFETATRAALQVK----KKKKTRCSLL*VCC 650
            + A   L+   +  +   E FE A + A + K    K K  RC+L   CC
Sbjct: 1025 MKAMQKLDRVTEKIQSTNEEFEAARKKAKKAKAAFEKVKNERCTLFTNCC 1074


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -1

Query: 359 TSLGCSRANP-ASPPRST*GSH 297
           T   CS A+   SPPRS  GSH
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSH 308


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -1

Query: 359 TSLGCSRANP-ASPPRST*GSH 297
           T   CS A+   SPPRS  GSH
Sbjct: 287 TQTDCSEASSDGSPPRSPEGSH 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,320
Number of Sequences: 2352
Number of extensions: 16697
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)