BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00121
(736 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 166 1e-41
03_01_0547 + 4093196-4093657,4094267-4095148 166 1e-41
03_01_0544 + 4082528-4082989,4083585-4084466 166 1e-41
03_01_0543 + 4076981-4077442,4078145-4079026 166 1e-41
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 104 6e-23
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 104 6e-23
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 102 3e-22
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 84 1e-16
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 81 1e-15
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 66 4e-11
02_04_0462 + 23131433-23132836 64 8e-11
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 46 3e-05
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 44 2e-04
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 41 0.001
03_05_0511 + 25056018-25059107 39 0.004
02_04_0148 - 20198407-20201424 38 0.008
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 36 0.025
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 34 0.10
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 34 0.13
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 33 0.18
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 33 0.31
08_02_0453 - 17331534-17331656,17332288-17332340,17332612-173327... 32 0.54
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 31 0.95
04_01_0103 + 1082077-1082167,1083037-1085477 31 1.3
02_04_0017 + 18937774-18937864,18938505-18940945 31 1.3
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 1.7
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.7
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 30 2.2
01_06_0662 + 30987187-30987277,30987825-30990214 30 2.2
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 2.9
09_01_0129 - 1954470-1955129,1956285-1956371,1956475-1956663,195... 29 5.1
07_01_1023 + 8840754-8842988,8843189-8843362 29 5.1
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 28 6.7
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 6.7
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 28 6.7
03_04_0206 - 18493178-18495310 28 6.7
09_04_0483 + 17979566-17980019,17980242-17980321,17980431-179808... 28 8.8
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 8.8
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 8.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 166 bits (404), Expect = 1e-41
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +2
Query: 254 RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADC 433
RSFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADC
Sbjct: 52 RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADC 111
Query: 434 AVLIVAAGTGEFEAGISKNGQTREH 508
AVLI+ + TG FEAGISK+GQTREH
Sbjct: 112 AVLIIDSTTGGFEAGISKDGQTREH 136
Score = 111 bits (268), Expect = 4e-25
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 688 HGDNMLEPSTKMPWFK 735
GDNM+E ST + W+K
Sbjct: 197 EGDNMIERSTNLDWYK 212
Score = 99 bits (238), Expect = 2e-21
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 166 bits (404), Expect = 1e-41
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +2
Query: 254 RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADC 433
RSFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADC
Sbjct: 52 RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADC 111
Query: 434 AVLIVAAGTGEFEAGISKNGQTREH 508
AVLI+ + TG FEAGISK+GQTREH
Sbjct: 112 AVLIIDSTTGGFEAGISKDGQTREH 136
Score = 111 bits (268), Expect = 4e-25
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 688 HGDNMLEPSTKMPWFK 735
GDNM+E ST + W+K
Sbjct: 197 EGDNMIERSTNLDWYK 212
Score = 99 bits (238), Expect = 2e-21
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 166 bits (404), Expect = 1e-41
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +2
Query: 254 RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADC 433
RSFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADC
Sbjct: 52 RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADC 111
Query: 434 AVLIVAAGTGEFEAGISKNGQTREH 508
AVLI+ + TG FEAGISK+GQTREH
Sbjct: 112 AVLIIDSTTGGFEAGISKDGQTREH 136
Score = 111 bits (268), Expect = 4e-25
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 688 HGDNMLEPSTKMPWFK 735
GDNM+E ST + W+K
Sbjct: 197 EGDNMIERSTNLDWYK 212
Score = 99 bits (238), Expect = 2e-21
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 166 bits (404), Expect = 1e-41
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +2
Query: 254 RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADC 433
RSFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADC
Sbjct: 52 RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADC 111
Query: 434 AVLIVAAGTGEFEAGISKNGQTREH 508
AVLI+ + TG FEAGISK+GQTREH
Sbjct: 112 AVLIIDSTTGGFEAGISKDGQTREH 136
Score = 111 bits (268), Expect = 4e-25
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 688 HGDNMLEPSTKMPWFK 735
GDNM+E ST + W+K
Sbjct: 197 EGDNMIERSTNLDWYK 212
Score = 99 bits (238), Expect = 2e-21
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 104 bits (250), Expect = 6e-23
Identities = 50/102 (49%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
Frame = +2
Query: 218 REVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 397
+E +E G G SF YAW +D+ ERERG+T+ +A+ ET KY V ++D+PGH+DF+
Sbjct: 284 KEAKEKGKG----SFAYAWAMDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFV 339
Query: 398 KNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREH 508
NMI+G +QAD A+L+V A TG FEAG+ GQT+EH
Sbjct: 340 PNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEH 381
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = +3
Query: 117 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GK
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGK 291
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +1
Query: 523 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 702
+ GV+QLIV VNKMD+ YS+ RFE IK ++ S+++ + ++V ++P+S N+
Sbjct: 387 SFGVEQLIVAVNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNL 444
Query: 703 LE 708
++
Sbjct: 445 IK 446
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 104 bits (250), Expect = 6e-23
Identities = 50/102 (49%), Positives = 69/102 (67%), Gaps = 5/102 (4%)
Frame = +2
Query: 218 REVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 397
+E +E G G SF YAW +D+ ERERG+T+ +A+ ET KY V ++D+PGH+DF+
Sbjct: 284 KEAKEKGKG----SFAYAWAMDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFV 339
Query: 398 KNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREH 508
NMI+G +QAD A+L+V A TG FEAG+ GQT+EH
Sbjct: 340 PNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEH 381
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = +3
Query: 117 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GK
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGK 291
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +1
Query: 523 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 702
+ GV+QLIV VNKMD+ YS+ RFE IK ++ S+++ + ++V ++P+S N+
Sbjct: 387 SFGVEQLIVAVNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNL 444
Query: 703 LE 708
++
Sbjct: 445 IK 446
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 102 bits (245), Expect = 3e-22
Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 436
SF YAW +D+ ERERGIT+ + + F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A
Sbjct: 280 SFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAA 339
Query: 437 VLIVAAGTGEFEAGISKN--GQTREH 508
+L++ A G FEAG+ N GQT+EH
Sbjct: 340 ILVIDASIGSFEAGMGINGIGQTKEH 365
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
S L + GV LIV VNKMDS E YS+ RF IK ++ ++++ GY +AVA+VPIS
Sbjct: 366 SQLVRSFGVDNLIVVVNKMDSVE--YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPISAM 423
Query: 688 HGDNML 705
+N++
Sbjct: 424 ENENLM 429
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 84.2 bits (199), Expect = 1e-16
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Frame = +2
Query: 206 QTYHREVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAP-- 379
Q Y +E ++ S+ A+++D + ER +G T+++ FET TI+DAP
Sbjct: 27 QKYEKEAKDKSR----ESWYMAYIMDTNEEERLKGKTVEVGRAHFETETTRFTILDAPVK 82
Query: 380 --GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 508
GH+ ++ NMI+G SQAD VL+++A GEFE G K GQTREH
Sbjct: 83 MKGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREH 127
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +1
Query: 511 LLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGW 687
LLA TLGV +LIV +NKMD +S+ R++EI+ ++ +++ GYN V F+PISG
Sbjct: 129 LLAKTLGVAKLIVVINKMDEPTVKWSKERYDEIESKMVPFLRSSGYNVKKDVHFLPISGL 188
Query: 688 HGDNM 702
G NM
Sbjct: 189 LGSNM 193
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 150 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKD 257
D+GKST G +++ G +D RTI+K+EKEA++ ++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRE 39
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +2
Query: 305 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 484
+G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYE 74
Query: 485 KNGQTREH 508
+ GQTREH
Sbjct: 75 RGGQTREH 82
Score = 58.0 bits (134), Expect = 7e-09
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 511 LLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGW 687
LLA TLGV +L+V +NKMD + +S+ R++EI+ ++ ++K GYN V F+PISG
Sbjct: 84 LLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGL 143
Query: 688 HGDNM 702
G NM
Sbjct: 144 LGTNM 148
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 65.7 bits (153), Expect = 4e-11
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+DK E+ RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+A
Sbjct: 105 IDKAPEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAP 164
Query: 458 TG 463
G
Sbjct: 165 DG 166
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 108 KEKTHINIVVIGHVDSGKSTTT 173
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLT 84
>02_04_0462 + 23131433-23132836
Length = 467
Score = 64.5 bits (150), Expect = 8e-11
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 167
Query: 458 TG 463
G
Sbjct: 168 DG 169
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 99 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 233
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE 107
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D + ERE+GITI A + Y V IID PGH DF + D A+L++ +
Sbjct: 111 MDSMDLEREKGITIQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 170
Query: 458 TGEFEAGISKNGQTREH 508
G I+ + Q R +
Sbjct: 171 GGVQSQSITVDRQMRRY 187
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGGI 203
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D + ERERGITI + + + ++D PGH DF + + AVL+V AG
Sbjct: 98 MDSISLERERGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAG 157
Query: 458 TG 463
G
Sbjct: 158 EG 159
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCG 197
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFE----TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 445
LD + ERERGITI + + Y + +ID PGH DF + + + A+L+
Sbjct: 114 LDNMDLERERGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLV 173
Query: 446 VAAGTG 463
V A G
Sbjct: 174 VDASQG 179
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 224
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D L E+ R IT+ A + V +ID+PGH DF + + +D A+++V A
Sbjct: 50 MDYLDEEQRRAITMKSAAVVLHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAV 109
Query: 458 TG---EFEAGISKNGQTREHPC 514
G + A + + R PC
Sbjct: 110 EGVHIQTHAALRQAFLERLRPC 131
Score = 31.9 bits (69), Expect = 0.54
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCG 197
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 37.9 bits (84), Expect = 0.008
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +2
Query: 269 AWVLDKLKAERERGITI---DIALWKF--ETSKYYVTIIDAPGHRDFIKNMITGTSQADC 433
A V+D L+ E+ R IT+ IAL + + + V +ID+PGH DF + AD
Sbjct: 54 ARVMDHLEEEQRRAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADS 113
Query: 434 AVLIVAAGTG---EFEAGISKNGQTREHPC 514
A+++V A G + A + + R PC
Sbjct: 114 ALVLVDAAEGVRVQTHAALRQAFVERLRPC 143
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 248
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
+D ++ E+ERGITI +K+ + IID PGH DF + D A++ +
Sbjct: 144 MDWMEQEQERGITITSPPTTAFWNKHRINIIDTPGHVDFTLEVERALRVLDGAIMSI 200
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 120 HINIVVIGHVDSGKSTTTGHLIYKCG 197
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 34.3 bits (75), Expect = 0.10
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 15/77 (19%)
Frame = +2
Query: 278 LDKLKAERERGITIDI---------------ALWKFETSKYYVTIIDAPGHRDFIKNMIT 412
LDKL+ ERERGIT+ A + + Y + +ID PGH DF +
Sbjct: 94 LDKLQVERERGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDFSYEVSR 153
Query: 413 GTSQADCAVLIVAAGTG 463
+ A+L+V A G
Sbjct: 154 SLAACQGALLVVDAAQG 170
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 209
N +I HVD GKST L+ G I K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 293 AERERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
A+ GIT I + E S +T +D PGH F G + D VL+VAA G
Sbjct: 224 AKEAGGITQHIGAFVVEMPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDG 281
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 275 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 394
++D ERERGITI + IID PGH DF
Sbjct: 156 IMDSNDLERERGITILSKNTSITYKGTKINIIDTPGHSDF 195
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 305 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
+ + + + L Y I+D PGH +F M AD AVL+V A G
Sbjct: 203 KAVPMSLVLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>08_02_0453 -
17331534-17331656,17332288-17332340,17332612-17332704,
17332747-17332903,17333246-17333384,17333467-17333529,
17337990-17338071,17338167-17338245,17338853-17339032,
17340010-17340272,17340486-17340622,17341662-17341729
Length = 478
Score = 31.9 bits (69), Expect = 0.54
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 576 FSGIHFVYSYDELFDTEGESEQGCSRV*P 490
++G+H Y+Y ++ D +G E GC V P
Sbjct: 395 YAGLHHKYAYAQVIDVQGSLEGGCGTVRP 423
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 31.1 bits (67), Expect = 0.95
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 356 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 454
+V+ +D PGH + M+ G + D A+L++AA
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 181
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 197
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 347 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 197
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 347 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 197
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 320 DIALWKFETSK----YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
D AL FE + Y + +ID+PGH DF + D A+++V
Sbjct: 83 DAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVV 129
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 365 IIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 562 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV------AFVPISGWHGDNMLEPSTK 720
M STEP + + + EV IKK+GYN + A+ G+H N PS++
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 197
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 347 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 365 IIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>09_01_0129 -
1954470-1955129,1956285-1956371,1956475-1956663,
1956772-1956900,1957386-1957472,1957572-1958036,
1959844-1959923,1961295-1961358,1961444-1961455
Length = 590
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = -2
Query: 678 NGHESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGI-----HFVY 553
NGH +++V++N L Y LL + G ++ SG+ HFVY
Sbjct: 379 NGHYGVTTFVISNTLSSTPYLLLIAIIPGAIAYYLSGLQRQIEHFVY 425
>07_01_1023 + 8840754-8842988,8843189-8843362
Length = 802
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -1
Query: 436 SAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNID--CDTTLTLSL*FVQYPSIF 263
S+IS G C+ + S N+ N +S +LPE ID LT++ Q SI
Sbjct: 138 SSISTGGLCNEANNNTSSKTLTNESNCDTSSDKLPEETIDNISSKVLTITAAQHQIDSIS 197
Query: 262 EGSL 251
G L
Sbjct: 198 TGEL 201
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 365 IIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ID PGH F G S D AV++V
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV 534
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 615 LLDFLKSGLTVWWFSGIHFVY 553
+L+ GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -1
Query: 511 RMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 347
+++ + + D F+G + I LRG+ +HVLDE RS++D VL+
Sbjct: 317 KVIEEIMIGEDRLIHFSGV-EMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 368
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 553 VNKMDSTEPPYSEPRFEEIKKEV 621
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>09_04_0483 +
17979566-17980019,17980242-17980321,17980431-17980895,
17981460-17981597,17982574-17982660,17982781-17982909,
17983034-17983225,17983393-17983479,17983707-17984378
Length = 767
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -2
Query: 678 NGHESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGI-----HFVYSYDELFDT 529
NGH S+V+AN L Y L + G ++ +G+ HF Y LF T
Sbjct: 552 NGHYGVGSFVIANTLSATPYLALISVAPGAIGYYLTGLQSSIDHFAYFAVVLFTT 606
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 114 KTHINIVVIGHVDSG 158
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 481 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 347
D F+G + + I LRG+ +HVLDE RS++D VL+
Sbjct: 350 DKLIHFSGV-AMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,838,742
Number of Sequences: 37544
Number of extensions: 433744
Number of successful extensions: 1296
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -