Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00121
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 185 3e-47
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 180 1e-45
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 180 1e-45
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 141 5e-34
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 123 2e-28
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 123 2e-28
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 109 2e-24
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 101 4e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 3e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 3e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 66 2e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 66 2e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 66 2e-11
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.007
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.28
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.28
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.28
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.28
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 32 0.37
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.1
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.0
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.6
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.6
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.6
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.6
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 4.5
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 4.5
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 29 4.5
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.9
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 28 7.9
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 28 7.9
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 185 bits (451), Expect = 3e-47
Identities = 105/177 (59%), Positives = 115/177 (64%)
Frame = +2
Query: 206 QTYHREVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 385
+ + +E +E G G SFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKG----SFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 386 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHPCXXXXXXXXXXXXE*TKW 565
RDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREH +
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV-------KQL 148
Query: 566 IPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSR 736
+ L T SPD +SRR T Q L D TETTC C GSR
Sbjct: 149 VSLRSPTRSPD----------SSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSR 195
Score = 109 bits (263), Expect = 2e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 180 bits (437), Expect = 1e-45
Identities = 84/101 (83%), Positives = 91/101 (90%)
Frame = +2
Query: 206 QTYHREVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 385
+ + +E +E G G SFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKG----SFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 386 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 508
RDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREH
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREH 136
Score = 123 bits (297), Expect = 1e-28
Identities = 58/76 (76%), Positives = 64/76 (84%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 137 ALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Query: 688 HGDNMLEPSTKMPWFK 735
+GDNMLE S+ MPWFK
Sbjct: 197 NGDNMLEVSSNMPWFK 212
Score = 109 bits (263), Expect = 2e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 180 bits (437), Expect = 1e-45
Identities = 84/101 (83%), Positives = 91/101 (90%)
Frame = +2
Query: 206 QTYHREVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 385
+ + +E +E G G SFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKG----SFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 386 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 508
RDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREH
Sbjct: 96 RDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREH 136
Score = 123 bits (297), Expect = 1e-28
Identities = 58/76 (76%), Positives = 64/76 (84%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 137 ALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Query: 688 HGDNMLEPSTKMPWFK 735
+GDNMLE S+ MPWFK
Sbjct: 197 NGDNMLEVSSNMPWFK 212
Score = 109 bits (263), Expect = 2e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 141 bits (341), Expect = 5e-34
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +2
Query: 206 QTYHREVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 385
+ + +E +E G G SFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGH
Sbjct: 40 EKFEKEAQEMGKG----SFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGH 95
Query: 386 RDFIKNMITGTSQADCAVLIVA 451
RDFIKNMITGTSQADCAVL+VA
Sbjct: 96 RDFIKNMITGTSQADCAVLVVA 117
Score = 109 bits (263), Expect = 2e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 107 bits (257), Expect = 8e-24
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +1
Query: 541 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 720
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 721 MPWFK 735
MPWFK
Sbjct: 174 MPWFK 178
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 123 bits (296), Expect = 2e-28
Identities = 55/88 (62%), Positives = 66/88 (75%)
Frame = +2
Query: 245 NG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 424
NG SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQ
Sbjct: 212 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 271
Query: 425 ADCAVLIVAAGTGEFEAGISKNGQTREH 508
AD A+L+V A TGEFE G GQT+EH
Sbjct: 272 ADAAILVVNATTGEFETGFENGGQTKEH 299
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +3
Query: 111 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGK 214
Score = 55.2 bits (127), Expect = 5e-08
Identities = 29/76 (38%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISG 684
+LL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG
Sbjct: 300 ALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSG 355
Query: 685 WHGDNMLEPSTKMPWF 732
+ G+N+++ ++ W+
Sbjct: 356 FTGENLIK-RMELDWY 370
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 123 bits (296), Expect = 2e-28
Identities = 55/88 (62%), Positives = 66/88 (75%)
Frame = +2
Query: 245 NG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 424
NG SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQ
Sbjct: 230 NGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQ 289
Query: 425 ADCAVLIVAAGTGEFEAGISKNGQTREH 508
AD A+L+V A TGEFE G GQT+EH
Sbjct: 290 ADAAILVVNATTGEFETGFENGGQTKEH 317
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +3
Query: 111 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGK 232
Score = 55.2 bits (127), Expect = 5e-08
Identities = 29/76 (38%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISG 684
+LL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG
Sbjct: 318 ALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSG 373
Query: 685 WHGDNMLEPSTKMPWF 732
+ G+N+++ ++ W+
Sbjct: 374 FTGENLIK-RMELDWY 388
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 109 bits (263), Expect = 2e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 206 QTYHREVREGGPGNG*RSFKYAWVLDKLKAER 301
+ + +E +E G G SFKYAWVLDKLK +
Sbjct: 40 EKFEKEAQEMGKG----SFKYAWVLDKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 101 bits (243), Expect = 4e-22
Identities = 47/101 (46%), Positives = 65/101 (64%)
Frame = +2
Query: 206 QTYHREVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 385
+ Y RE +E G S+ +W +D ERE+G T+++ FET K + TI+DAPGH
Sbjct: 142 EKYEREAKEKGR----ESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGH 197
Query: 386 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 508
+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH
Sbjct: 198 KSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREH 238
Score = 68.5 bits (160), Expect = 5e-12
Identities = 28/51 (54%), Positives = 40/51 (78%)
Frame = +3
Query: 105 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKD 257
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G++
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRE 154
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISG 684
S+L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG
Sbjct: 239 SMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSG 298
Query: 685 WHG 693
G
Sbjct: 299 LTG 301
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 458 TGEFEAGISKNGQTREH 508
G E QT+EH
Sbjct: 143 DGVME-------QTKEH 152
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 114 KTHINIVVIGHVDSGKSTTT 173
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 458 TGEFEAGISKNGQTREH 508
G E QT+EH
Sbjct: 143 DGVME-------QTKEH 152
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 114 KTHINIVVIGHVDSGKSTTT 173
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 458 TGEFEAGISKNGQTREH 508
G QTREH
Sbjct: 147 DGPMP-------QTREH 156
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 108 KEKTHINIVVIGHVDSGKSTTT 173
++K H+N+ IGHVD GK+T T
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLT 66
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 458 TGEFEAGISKNGQTREH 508
G QTREH
Sbjct: 148 DGPMP-------QTREH 157
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 108 KEKTHINIVVIGHVDSGKSTTT 173
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 458 TGEFEAGISKNGQTREH 508
G QTREH
Sbjct: 148 DGPMP-------QTREH 157
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 108 KEKTHINIVVIGHVDSGKSTTT 173
++K H+N+ IGHVD GK+T T
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLT 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 275 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 454
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 455 GTG 463
G
Sbjct: 136 NQG 138
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 242
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 275 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 454
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 455 GTG 463
G
Sbjct: 124 SAG 126
Score = 34.3 bits (75), Expect = 0.091
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGGI 203
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 458 TG 463
G
Sbjct: 146 VG 147
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGGID 206
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 308 GITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
GIT I + E +K VT +D PGH F G AD VL+VAA G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 197
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 314 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 281 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 445
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 446 VAAGTG 463
V A G
Sbjct: 232 VDAHEG 237
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 197
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 314 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 281 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 445
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 446 VAAGTG 463
V A G
Sbjct: 107 VDAHEG 112
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSNMLGYWTN 287
+I+ GH+D S GH +K GI E FE E ++ + P+ GY T+
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATS 1685
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 356 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 451
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 365 IIDAPGHRDFIKNMITGTSQADCAVLIV 448
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 623 PHTSRRLATTQLLSLSCPFLD 685
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 623 PHTSRRLATTQLLSLSCPFLD 685
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 623 PHTSRRLATTQLLSLSCPFLD 685
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 623 PHTSRRLATTQLLSLSCPFLD 685
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 123 INIVVIGHVDSGKSTTT 173
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 359 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 508
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEH 116
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 123 INIVVIGHVDSGKSTTT 173
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 96 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGKD 257
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 96 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGKD 257
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 96 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGKD 257
PK +EK I + +V+ G TTG +CGG ++ R + + AQE KD
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWKD 1354
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 162 STTTGHLIYKCGGIDKRTIEKFEKEAQEMGKDPSNMLGYWT 284
STTT HL+ + GG+ Q +GK N++G+ T
Sbjct: 234 STTTAHLVSQAGGLSPLATMP-SCNVQVLGKTKKNLIGFST 273
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 359 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 454
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 96 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 188
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 96 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 188
P K+ + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,481,029
Number of Sequences: 27780
Number of extensions: 363469
Number of successful extensions: 1155
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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