Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00121
(736 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 183 1e-48
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 180 2e-47
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 169 2e-44
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 156 2e-40
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.0
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 9.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 9.1
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 9.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 9.1
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.1
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 183 bits (446), Expect = 1e-48
Identities = 88/101 (87%), Positives = 92/101 (91%)
Frame = +2
Query: 206 QTYHREVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 385
+ + +E +E G G SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH
Sbjct: 40 EKFEKEAQEMGKG----SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 95
Query: 386 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 508
RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH
Sbjct: 96 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 136
Score = 156 bits (378), Expect = 2e-40
Identities = 72/76 (94%), Positives = 74/76 (97%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGW
Sbjct: 137 ALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 196
Query: 688 HGDNMLEPSTKMPWFK 735
HGDNMLE S+KMPWFK
Sbjct: 197 HGDNMLEVSSKMPWFK 212
Score = 109 bits (262), Expect = 3e-26
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 180 bits (437), Expect = 2e-47
Identities = 86/101 (85%), Positives = 91/101 (90%)
Frame = +2
Query: 206 QTYHREVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 385
+ + +E +E G G SFKYAWVLDKLKAERERGITIDIALWKFET+KYYVTIIDAPGH
Sbjct: 40 EKFEKEAQEMGKG----SFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGH 95
Query: 386 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 508
RDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTREH
Sbjct: 96 RDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREH 136
Score = 147 bits (357), Expect = 8e-38
Identities = 67/76 (88%), Positives = 71/76 (93%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFVPISGW
Sbjct: 137 ALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGW 196
Query: 688 HGDNMLEPSTKMPWFK 735
HGDNMLEPS K PW+K
Sbjct: 197 HGDNMLEPSPKTPWYK 212
Score = 109 bits (262), Expect = 3e-26
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 169 bits (412), Expect = 2e-44
Identities = 79/79 (100%), Positives = 79/79 (100%)
Frame = +2
Query: 272 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 451
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 452 AGTGEFEAGISKNGQTREH 508
AGTGEFEAGISKNGQTREH
Sbjct: 61 AGTGEFEAGISKNGQTREH 79
Score = 156 bits (378), Expect = 2e-40
Identities = 72/76 (94%), Positives = 74/76 (97%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGW
Sbjct: 80 ALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 139
Query: 688 HGDNMLEPSTKMPWFK 735
HGDNMLE S+KMPWFK
Sbjct: 140 HGDNMLEVSSKMPWFK 155
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 156 bits (378), Expect = 2e-40
Identities = 72/76 (94%), Positives = 74/76 (97%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGW
Sbjct: 64 ALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 123
Query: 688 HGDNMLEPSTKMPWFK 735
HGDNMLE S+KMPWFK
Sbjct: 124 HGDNMLEVSSKMPWFK 139
Score = 136 bits (330), Expect = 2e-34
Identities = 63/63 (100%), Positives = 63/63 (100%)
Frame = +2
Query: 320 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 499
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 500 REH 508
REH
Sbjct: 61 REH 63
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 359 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.56
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 114 KTHINIVVIGHVDSGKST 167
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 123 INIVVIGHVDSGKST 167
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 344 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 445
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 344 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 445
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -3
Query: 71 FHFFTSQNNFFDTHH 27
FH T+ N F HH
Sbjct: 108 FHIATTSNEFIRIHH 122
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -3
Query: 71 FHFFTSQNNFFDTHH 27
FH T+ N F HH
Sbjct: 108 FHIATTSNEFIRIHH 122
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 720 FG*RLQHVVSVPSRNGHESDSSWV 649
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -3
Query: 71 FHFFTSQNNFFDTHH 27
FH T+ N F HH
Sbjct: 47 FHIATTSNEFIRIHH 61
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 563 WIPLNHHTVSPDLRKSRRKY 622
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,873
Number of Sequences: 438
Number of extensions: 4403
Number of successful extensions: 26
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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