Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00121
(736 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 166 1e-41
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 166 1e-41
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 166 1e-41
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 166 1e-41
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 105 4e-23
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 90 1e-18
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 65 5e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 65 5e-11
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 46 3e-05
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 46 3e-05
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 43 2e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 41 0.001
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.005
At5g13650.2 68418.m01585 elongation factor family protein contai... 36 0.021
At5g13650.1 68418.m01584 elongation factor family protein contai... 36 0.021
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.028
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.028
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 36 0.037
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.26
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.34
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.34
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.45
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.45
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 1.0
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.8
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.8
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.8
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.4
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.4
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 3.2
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.6
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 7.4
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 9.8
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 9.8
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 27 9.8
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 166 bits (404), Expect = 1e-41
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +2
Query: 254 RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADC 433
RSFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADC
Sbjct: 52 RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADC 111
Query: 434 AVLIVAAGTGEFEAGISKNGQTREH 508
AVLI+ + TG FEAGISK+GQTREH
Sbjct: 112 AVLIIDSTTGGFEAGISKDGQTREH 136
Score = 111 bits (267), Expect = 5e-25
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 688 HGDNMLEPSTKMPWFK 735
GDNM+E ST + W+K
Sbjct: 197 EGDNMIERSTNLDWYK 212
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 166 bits (404), Expect = 1e-41
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +2
Query: 254 RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADC 433
RSFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADC
Sbjct: 52 RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADC 111
Query: 434 AVLIVAAGTGEFEAGISKNGQTREH 508
AVLI+ + TG FEAGISK+GQTREH
Sbjct: 112 AVLIIDSTTGGFEAGISKDGQTREH 136
Score = 111 bits (267), Expect = 5e-25
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 688 HGDNMLEPSTKMPWFK 735
GDNM+E ST + W+K
Sbjct: 197 EGDNMIERSTNLDWYK 212
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 166 bits (404), Expect = 1e-41
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +2
Query: 254 RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADC 433
RSFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADC
Sbjct: 52 RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADC 111
Query: 434 AVLIVAAGTGEFEAGISKNGQTREH 508
AVLI+ + TG FEAGISK+GQTREH
Sbjct: 112 AVLIIDSTTGGFEAGISKDGQTREH 136
Score = 111 bits (267), Expect = 5e-25
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 688 HGDNMLEPSTKMPWFK 735
GDNM+E ST + W+K
Sbjct: 197 EGDNMIERSTNLDWYK 212
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 166 bits (404), Expect = 1e-41
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +2
Query: 254 RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADC 433
RSFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADC
Sbjct: 52 RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADC 111
Query: 434 AVLIVAAGTGEFEAGISKNGQTREH 508
AVLI+ + TG FEAGISK+GQTREH
Sbjct: 112 AVLIIDSTTGGFEAGISKDGQTREH 136
Score = 111 bits (267), Expect = 5e-25
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +1
Query: 508 SLLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 687
+LLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 196
Query: 688 HGDNMLEPSTKMPWFK 735
GDNM+E ST + W+K
Sbjct: 197 EGDNMIERSTNLDWYK 212
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +3
Query: 102 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 105 bits (251), Expect = 4e-23
Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = +2
Query: 212 YHREVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRD 391
Y +E + G G SF YAW LD+ ERERGIT+ +A+ F + +++V ++D+PGH+D
Sbjct: 274 YEKEAKLQGKG----SFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKD 329
Query: 392 FIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREH 508
F+ NMI G +QAD A+L++ A G FEAG GQTREH
Sbjct: 330 FVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREH 369
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +3
Query: 117 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 254
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GK
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGK 283
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +1
Query: 529 GVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 705
GV+Q+IV +NKMD YS+ RF+ IK+ V S+++ + +++ ++P+S N++
Sbjct: 377 GVEQVIVAINKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLV 433
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/101 (41%), Positives = 63/101 (62%)
Frame = +2
Query: 206 QTYHREVREGGPGNG*RSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 385
Q Y +E ++ S+ A+++D + ER +G T+++ FET TI+DAPGH
Sbjct: 134 QKYEKEAKDKSR----ESWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGH 189
Query: 386 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 508
+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH
Sbjct: 190 KSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREH 230
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/49 (46%), Positives = 37/49 (75%)
Frame = +3
Query: 111 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKD 257
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ ++
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRE 146
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +1
Query: 514 LAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWH 690
LA TLGV +LIV VNKMD +S+ R++EI++++ ++K GYN V F+PISG
Sbjct: 233 LAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLM 292
Query: 691 GDNM 702
G NM
Sbjct: 293 GKNM 296
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 458 TG 463
G
Sbjct: 177 DG 178
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 99 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 233
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+DK E++RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 458 TG 463
G
Sbjct: 165 DG 166
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 108 KEKTHINIVVIGHVDSGKSTTT 173
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 458 TGEFEAGISKNGQTREH 508
G I+ + Q R +
Sbjct: 168 GGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGGI 203
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 458 TGEFEAGISKNGQTREH 508
G I+ + Q R +
Sbjct: 168 GGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGGI 203
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 278 LDKLKAERERGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 445
LD + ERERGITI + + +E + + + +ID PGH DF + + + A+L+
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 446 VAAGTG 463
V A G
Sbjct: 183 VDASQG 188
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 224
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D L E+ R IT+ + + Y + +ID+PGH DF + T +D A+++V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 458 TG 463
G
Sbjct: 109 EG 110
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCGG 200
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 457
+D ++ E+ERGITI A K+ + IID PGH DF + D A+ + +
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195
Query: 458 TG 463
G
Sbjct: 196 AG 197
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 114 KTHINIVVIGHVDSGKSTTTGHLIYKCG 197
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +2
Query: 275 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 454
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 455 GTG 463
G
Sbjct: 180 VEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +2
Query: 275 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 454
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 455 GTG 463
G
Sbjct: 179 VEG 181
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.028
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 296 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 460
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 461 G 463
G
Sbjct: 245 G 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.028
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 296 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 460
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 461 G 463
G
Sbjct: 245 G 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 35.5 bits (78), Expect = 0.037
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Frame = +2
Query: 278 LDKLKAERERGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSQAD 430
LDKL +RERGIT+ E S Y + +ID PGH DF + S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 431 CAVLIVAAGTG 463
A+L+V A G
Sbjct: 161 GALLVVDAAQG 171
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 99 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 209
K EK N +I H+D GKST L+ G I K
Sbjct: 60 KFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 359 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 463
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 344 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 454
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 344 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 454
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 356 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 454
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 338 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 454
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 523 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 684
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 365 IIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 365 IIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 365 IIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 347 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 126 NIVVIGHVDSGKSTTTGHLIYKCG 197
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 359 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 448
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = +2
Query: 284 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 451
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 452 AGTG 463
A G
Sbjct: 585 ADDG 588
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 586 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 675
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 592 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 702
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 568 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 681
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 568 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 681
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -1
Query: 511 RMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 347
+++ + + D F+G + +I LRG+ HVLDE RS++D VL+
Sbjct: 342 KLIEEIMIGEDKLIHFSGC-EMGQACSIVLRGASHHVLDE--AERSLHDALCVLS 393
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,595,667
Number of Sequences: 28952
Number of extensions: 343614
Number of successful extensions: 1067
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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