Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00120
(464 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 26 0.15
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 23 1.1
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 22 3.2
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 4.3
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 4.3
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 21 4.3
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 5.6
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 7.4
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 20 9.8
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 20 9.8
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 20 9.8
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 20 9.8
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 26.2 bits (55), Expect = 0.15
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 292 YHPFSLQDCTQWYLRHGSNRHHI 224
YHP DC +Y+ G +HH+
Sbjct: 924 YHP-DKADCRMYYMCEGERKHHM 945
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 23.4 bits (48), Expect = 1.1
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Frame = -2
Query: 289 HPFSLQDCTQWYLRHGSNRHHISNFKSCXLS-----TINKLACVEASGAMKSSFLVLNLY 125
HP SL Q L H HH+ S S +IN+L S A + ++ Y
Sbjct: 335 HPLSLSSDHQAMLHHNPMSHHLKQEPSGFTSSNHPFSINRLLPTAESKADIKMYADMHQY 394
Query: 124 G 122
G
Sbjct: 395 G 395
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.8 bits (44), Expect = 3.2
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = -1
Query: 167 FGSNEELLPCLELVWIAEVYNSQRCT-STRVMDY 69
FG+ L +L+W EV N R + DY
Sbjct: 180 FGARHGLETLNQLIWFDEVVNELRILHGVEIRDY 213
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 4.3
Identities = 5/11 (45%), Positives = 7/11 (63%)
Frame = +3
Query: 315 WKLRHCDWTQS 347
W HCDW ++
Sbjct: 2271 WNKDHCDWPEN 2281
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.4 bits (43), Expect = 4.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 395 TFLAPDGSFTLVR 357
T PDG FT++R
Sbjct: 579 TVTVPDGGFTIIR 591
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.4 bits (43), Expect = 4.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 340 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRID 453
H+P A + LP+GA L ++ G+V +A G ++
Sbjct: 35 HSPCATGSN-GLPAGAGSNLLCASNGLVTTLASGSSLN 71
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 5.6
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = +1
Query: 265 CNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSG 384
CN+ + D R+ G+ ++ H + + LPSG
Sbjct: 144 CNIPSFVADFVRVEAWVGSDGSLYNHTANYDSKYLVLPSG 183
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 20.6 bits (41), Expect = 7.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 170 LYTGQFVYCGKXATLEVGNVMPV 238
L+T +F + ATL V N++ V
Sbjct: 468 LFTQKFTFVAGLATLSVLNLLSV 490
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 20.2 bits (40), Expect = 9.8
Identities = 5/22 (22%), Positives = 12/22 (54%)
Frame = +1
Query: 139 QGRSSSLLPKPLHRPICLLWKE 204
Q ++ KP+H + +W++
Sbjct: 5 QSPPPEMMGKPIHEEVAQVWEQ 26
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 20.2 bits (40), Expect = 9.8
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +3
Query: 405 KQQRHGRYCCWRWTY 449
+Q+RH Y +++TY
Sbjct: 33 RQERHSFYKIYKYTY 47
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 20.2 bits (40), Expect = 9.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 344 ILMLSVQE*SYRLEPRRFCHQ 406
+++ SV Y LE +RF HQ
Sbjct: 352 LVLNSVSADVYNLEIQRFIHQ 372
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 20.2 bits (40), Expect = 9.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 344 ILMLSVQE*SYRLEPRRFCHQ 406
+++ SV Y LE +RF HQ
Sbjct: 352 LVLNSVSADVYNLEIQRFIHQ 372
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,438
Number of Sequences: 336
Number of extensions: 2530
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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