Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00120
(464 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 128 1e-31
AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein. 25 1.3
AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein. 25 1.3
AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein. 25 1.3
AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein. 25 1.3
AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein. 25 1.3
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 25 1.7
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 1.7
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 1.7
CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein ... 24 2.3
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 23 5.3
AF316638-1|AAG45166.1| 211|Anopheles gambiae glutathione S-tran... 23 5.3
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 128 bits (308), Expect = 1e-31
Identities = 59/70 (84%), Positives = 63/70 (90%)
Frame = +1
Query: 253 GTIVCNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 432
GTIVCNLEEK GD +LAR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MVGIV
Sbjct: 110 GTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIV 169
Query: 433 AGGGRIDKPI 462
AGGGRIDKPI
Sbjct: 170 AGGGRIDKPI 179
Score = 97.5 bits (232), Expect = 2e-22
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = +3
Query: 6 PKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 167
PKLR LDYAERHGY+KGVVK II DPGRGAPLAVV+FRDPY+F+ K+LFIA E
Sbjct: 27 PKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDPYRFRLSKQLFIAAE 80
Score = 54.0 bits (124), Expect = 2e-09
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 161 SRSLYTGQFVYCGKXATLEVGNVMPVGAMPEVPLCAILKRK 283
+ +YTGQFVYCG+ A L++GNV+P+G MPE + L+ K
Sbjct: 79 AEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEK 119
>AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 1.3
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +1
Query: 76 MTLVEVHLWLLYTSAIHTSSRQGRSSSLLPKPLHRPICLLWKEXNS*SWKC 228
M + +++WL +TS + ++ S +P H + + +WKC
Sbjct: 1 MASLRLYIWLFLNICFYTSGTEAKAPSRPVQPYHYDYSRI--QETDQAWKC 49
>AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 1.3
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +1
Query: 76 MTLVEVHLWLLYTSAIHTSSRQGRSSSLLPKPLHRPICLLWKEXNS*SWKC 228
M + +++WL +TS + ++ S +P H + + +WKC
Sbjct: 1 MASLRLYIWLFLNICFYTSGTEAKAPSRPVQPYHYDYSRI--QETDQAWKC 49
>AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 1.3
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +1
Query: 76 MTLVEVHLWLLYTSAIHTSSRQGRSSSLLPKPLHRPICLLWKEXNS*SWKC 228
M + +++WL +TS + ++ S +P H + + +WKC
Sbjct: 1 MASLRLYIWLFLNICFYTSGAEAKAPSRPVQPYHYDYSRI--QETDQAWKC 49
>AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 1.3
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +1
Query: 76 MTLVEVHLWLLYTSAIHTSSRQGRSSSLLPKPLHRPICLLWKEXNS*SWKC 228
M + +++WL +TS + ++ S +P H + + +WKC
Sbjct: 1 MASLRLYIWLFLNICFYTSGAEAKAPSRPVQPYHYDYSRI--QETDQAWKC 49
>AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 25.0 bits (52), Expect = 1.3
Identities = 11/51 (21%), Positives = 23/51 (45%)
Frame = +1
Query: 76 MTLVEVHLWLLYTSAIHTSSRQGRSSSLLPKPLHRPICLLWKEXNS*SWKC 228
M + +++WL +TS + ++ S +P H + + +WKC
Sbjct: 1 MASLRLYIWLFLNICFYTSGAEAKAPSRPVQPYHYDYSRI--QETDQAWKC 49
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 24.6 bits (51), Expect = 1.7
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +3
Query: 405 KQQRHGRYCCWRWTY 449
+QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 1.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 36 RHGYIKGVVKDIIHDP 83
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 1.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 36 RHGYIKGVVKDIIHDP 83
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein
protein.
Length = 196
Score = 24.2 bits (50), Expect = 2.3
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 101 GCCTLPRSIQVQDKEGALHCSRSLYTGQFVYCGKXATLE 217
GCC LP + Q K+ + + + + T F Y + + +E
Sbjct: 16 GCCALPANTNAQTKQDSSN-NNNRTTELFAYPAEQSAIE 53
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 23.0 bits (47), Expect = 5.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 455 LSIRPPPATIPTM 417
+ +RPPP +PTM
Sbjct: 114 MGMRPPPMMVPTM 126
>AF316638-1|AAG45166.1| 211|Anopheles gambiae glutathione
S-transferase D12 protein.
Length = 211
Score = 23.0 bits (47), Expect = 5.3
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +1
Query: 265 CNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 414
C+L+ D + FA + H PD + TR + + +L S N+
Sbjct: 162 CSLDMMKYDLTAYPNVQRWFAKMGTHIPDLEPTRKTIEEELRALLQSMNK 211
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,004
Number of Sequences: 2352
Number of extensions: 12237
Number of successful extensions: 36
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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