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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00120
         (464 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z28407-1|CAA82248.1|  257|Homo sapiens ribosomal protein L8 prot...   117   2e-26
CR457046-1|CAG33327.1|  257|Homo sapiens RPL8 protein.                117   2e-26
BT007379-1|AAP36043.1|  257|Homo sapiens ribosomal protein L8 pr...   117   2e-26
BC093064-1|AAH93064.1|  257|Homo sapiens ribosomal protein L8 pr...   117   2e-26
BC013104-1|AAH13104.1|  257|Homo sapiens ribosomal protein L8 pr...   117   2e-26
BC012197-1|AAH12197.1|  257|Homo sapiens ribosomal protein L8 pr...   117   2e-26
BC000077-1|AAH00077.1|  257|Homo sapiens ribosomal protein L8 pr...   117   2e-26
BC000047-1|AAH00047.2|  211|Homo sapiens RPL8 protein protein.        117   2e-26
AB061821-1|BAB79459.1|  257|Homo sapiens ribosomal protein L8 pr...   117   2e-26
AB007168-1|BAA25829.1|  130|Homo sapiens ribosomal protein L8 pr...    97   3e-20
BC071733-1|AAH71733.1|  457|Homo sapiens retinoic acid receptor,...    32   1.1  
AF283809-1|AAF87249.1|   54|Homo sapiens retinoic acid receptor ...    32   1.1  
Z80345-1|CAB02492.1|  412|Homo sapiens acyl-CoA dehydrogenase pr...    29   6.0  
U83992-1|AAD00552.1|  412|Homo sapiens short chain acyl CoA dehy...    29   6.0  
M26393-1|AAA60307.1|  412|Homo sapiens ACADS protein.                  29   6.0  
BC025963-1|AAH25963.1|  412|Homo sapiens acyl-Coenzyme A dehydro...    29   6.0  

>Z28407-1|CAA82248.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +1

Query: 253 GTIVCNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 432
           GTIVC LEEK GD  +LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 110 GTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVV 169

Query: 433 AGGGRIDKPI 462
           AGGGRIDKPI
Sbjct: 170 AGGGRIDKPI 179



 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   APKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 167
           A +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 26  AARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80



 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +2

Query: 161 SRSLYTGQFVYCGKXATLEVGNVMPVGAMPEVPLCAILKRK 283
           +  ++TGQFVYCGK A L +GNV+PVG MPE  +   L+ K
Sbjct: 79  AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119


>CR457046-1|CAG33327.1|  257|Homo sapiens RPL8 protein.
          Length = 257

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +1

Query: 253 GTIVCNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 432
           GTIVC LEEK GD  +LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 110 GTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVV 169

Query: 433 AGGGRIDKPI 462
           AGGGRIDKPI
Sbjct: 170 AGGGRIDKPI 179



 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   APKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 167
           A +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 26  AARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80



 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +2

Query: 161 SRSLYTGQFVYCGKXATLEVGNVMPVGAMPEVPLCAILKRK 283
           +  ++TGQFVYCGK A L +GNV+PVG MPE  +   L+ K
Sbjct: 79  AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119


>BT007379-1|AAP36043.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +1

Query: 253 GTIVCNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 432
           GTIVC LEEK GD  +LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 110 GTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVV 169

Query: 433 AGGGRIDKPI 462
           AGGGRIDKPI
Sbjct: 170 AGGGRIDKPI 179



 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   APKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 167
           A +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 26  AARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80



 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 23/41 (56%), Positives = 29/41 (70%)
 Frame = +2

Query: 161 SRSLYTGQFVYCGKXATLEVGNVMPVGAMPEVPLCAILKRK 283
           +  ++TGQFVYCGK A L VGNV+PVG MPE  +   L+ K
Sbjct: 79  AEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEK 119


>BC093064-1|AAH93064.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +1

Query: 253 GTIVCNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 432
           GTIVC LEEK GD  +LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 110 GTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVV 169

Query: 433 AGGGRIDKPI 462
           AGGGRIDKPI
Sbjct: 170 AGGGRIDKPI 179



 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   APKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 167
           A +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 26  AARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80



 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +2

Query: 161 SRSLYTGQFVYCGKXATLEVGNVMPVGAMPEVPLCAILKRK 283
           +  ++TGQFVYCGK A L +GNV+PVG MPE  +   L+ K
Sbjct: 79  AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119


>BC013104-1|AAH13104.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +1

Query: 253 GTIVCNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 432
           GTIVC LEEK GD  +LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 110 GTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVV 169

Query: 433 AGGGRIDKPI 462
           AGGGRIDKPI
Sbjct: 170 AGGGRIDKPI 179



 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   APKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 167
           A +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 26  AARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80



 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 23/41 (56%), Positives = 29/41 (70%)
 Frame = +2

Query: 161 SRSLYTGQFVYCGKXATLEVGNVMPVGAMPEVPLCAILKRK 283
           +  ++TGQFVYCGK A L VGNV+PVG MPE  +   L+ K
Sbjct: 79  AEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEK 119


>BC012197-1|AAH12197.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +1

Query: 253 GTIVCNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 432
           GTIVC LEEK GD  +LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 110 GTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVV 169

Query: 433 AGGGRIDKPI 462
           AGGGRIDKPI
Sbjct: 170 AGGGRIDKPI 179



 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   APKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 167
           A +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 26  AARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80



 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 23/41 (56%), Positives = 29/41 (70%)
 Frame = +2

Query: 161 SRSLYTGQFVYCGKXATLEVGNVMPVGAMPEVPLCAILKRK 283
           +  ++TGQFVYCGK A L VGNV+PVG MPE  +   L+ K
Sbjct: 79  AEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEK 119


>BC000077-1|AAH00077.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +1

Query: 253 GTIVCNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 432
           GTIVC LEEK GD  +LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 110 GTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVV 169

Query: 433 AGGGRIDKPI 462
           AGGGRIDKPI
Sbjct: 170 AGGGRIDKPI 179



 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   APKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 167
           A +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 26  AARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80



 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +2

Query: 161 SRSLYTGQFVYCGKXATLEVGNVMPVGAMPEVPLCAILKRK 283
           +  ++TGQFVYCGK A L +GNV+PVG MPE  +   L+ K
Sbjct: 79  AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119


>BC000047-1|AAH00047.2|  211|Homo sapiens RPL8 protein protein.
          Length = 211

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +1

Query: 253 GTIVCNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 432
           GTIVC LEEK GD  +LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 64  GTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVV 123

Query: 433 AGGGRIDKPI 462
           AGGGRIDKPI
Sbjct: 124 AGGGRIDKPI 133



 Score = 62.1 bits (144), Expect = 9e-10
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = +3

Query: 66  DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 167
           DIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 1   DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 34



 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +2

Query: 161 SRSLYTGQFVYCGKXATLEVGNVMPVGAMPEVPLCAILKRK 283
           +  ++TGQFVYCGK A L +GNV+PVG MPE  +   L+ K
Sbjct: 33  AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 73


>AB061821-1|BAB79459.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +1

Query: 253 GTIVCNLEEKMGDXSRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 432
           GTIVC LEEK GD  +LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+V
Sbjct: 110 GTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVV 169

Query: 433 AGGGRIDKPI 462
           AGGGRIDKPI
Sbjct: 170 AGGGRIDKPI 179



 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   APKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 167
           A +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 26  AARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80



 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +2

Query: 161 SRSLYTGQFVYCGKXATLEVGNVMPVGAMPEVPLCAILKRK 283
           +  ++TGQFVYCGK A L +GNV+PVG MPE  +   L+ K
Sbjct: 79  AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119


>AB007168-1|BAA25829.1|  130|Homo sapiens ribosomal protein L8
           protein.
          Length = 130

 Score = 97.1 bits (231), Expect = 3e-20
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +3

Query: 3   APKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 167
           A +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 22  AARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 76



 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 22/41 (53%), Positives = 29/41 (70%)
 Frame = +2

Query: 161 SRSLYTGQFVYCGKXATLEVGNVMPVGAMPEVPLCAILKRK 283
           +  ++TGQFVYCGK A L +GNV+PVG MPE  +   L+ K
Sbjct: 75  AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 115



 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +1

Query: 253 GTIVCNLEEKMGDXSRLARASGNFA 327
           GTIVC LEEK GD  +LARASGN+A
Sbjct: 106 GTIVCCLEEKPGDRGKLARASGNYA 130


>BC071733-1|AAH71733.1|  457|Homo sapiens retinoic acid receptor,
           alpha protein.
          Length = 457

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -2

Query: 175 VEASGAMKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 50
           VE  G   + FLV++ Y  +R C    KG P PG +   L TPL
Sbjct: 5   VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48


>AF283809-1|AAF87249.1|   54|Homo sapiens retinoic acid receptor
           alpha 2 isoform protein.
          Length = 54

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -2

Query: 175 VEASGAMKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 50
           VE  G   + FLV++ Y  +R C    KG P PG +   L TPL
Sbjct: 5   VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48


>Z80345-1|CAB02492.1|  412|Homo sapiens acyl-CoA dehydrogenase
           protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -1

Query: 305 ARRLLSPIFSSRLHTMVPQAWLQQASHFQLQELXSFHNKQIGLCRGFGSNEELLP 141
           A  LL+         + P+AW Q  + +Q  EL   H   +  CR F + +EL P
Sbjct: 2   AAALLARASGPARRALCPRAWRQLHTIYQSVELPETHQMLLQTCRDF-AEKELFP 55


>U83992-1|AAD00552.1|  412|Homo sapiens short chain acyl CoA
           dehydrogenase protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -1

Query: 305 ARRLLSPIFSSRLHTMVPQAWLQQASHFQLQELXSFHNKQIGLCRGFGSNEELLP 141
           A  LL+         + P+AW Q  + +Q  EL   H   +  CR F + +EL P
Sbjct: 2   AAALLARASGPARRALCPRAWRQLHTIYQSVELPETHQMLLQTCRDF-AEKELFP 55


>M26393-1|AAA60307.1|  412|Homo sapiens ACADS protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -1

Query: 305 ARRLLSPIFSSRLHTMVPQAWLQQASHFQLQELXSFHNKQIGLCRGFGSNEELLP 141
           A  LL+         + P+AW Q  + +Q  EL   H   +  CR F + +EL P
Sbjct: 2   AAALLARASGPARRALCPRAWRQLHTIYQSVELPETHQMLLQTCRDF-AEKELFP 55


>BC025963-1|AAH25963.1|  412|Homo sapiens acyl-Coenzyme A
           dehydrogenase, C-2 to C-3 short chain protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -1

Query: 305 ARRLLSPIFSSRLHTMVPQAWLQQASHFQLQELXSFHNKQIGLCRGFGSNEELLP 141
           A  LL+         + P+AW Q  + +Q  EL   H   +  CR F + +EL P
Sbjct: 2   AAALLARASGPARRALCPRAWRQLHTIYQSVELPETHQMLLQTCRDF-AEKELFP 55


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,305,419
Number of Sequences: 237096
Number of extensions: 1745113
Number of successful extensions: 4179
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4179
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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