Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00119
(727 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 128 6e-31
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 128 6e-31
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 81 2e-16
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 56 5e-09
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.024
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.29
SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase |Schizosa... 29 0.68
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 29 0.89
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 1.6
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 27 2.1
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 2.1
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 27 3.6
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 25 8.3
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 8.3
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 128 bits (310), Expect = 6e-31
Identities = 61/93 (65%), Positives = 72/93 (77%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSYRE+V+E S LSKSPNKHNR+
Sbjct: 527 EHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRI 586
Query: 182 FMKAQPMPDGLPEDIDEGRVNPRDASRLALGIL 280
FM A+PM + L I+ G VNPRD ++ I+
Sbjct: 587 FMTAEPMSEELSVAIETGHVNPRDDFKVRARIM 619
Score = 87.4 bits (207), Expect = 2e-18
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 685
AIHRGGGQIIPT RR +YA L A P + EPV+L EIQ E A+GGIY VLN++RGHVF
Sbjct: 697 AIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVF 755
Score = 78.6 bits (185), Expect = 8e-16
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +3
Query: 351 NILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTE 509
N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR RFNI DV LH +
Sbjct: 644 NVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHAD 696
Score = 48.8 bits (111), Expect = 8e-07
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +1
Query: 256 FKTRARYLTEKYEYDVTEARKIWCFGPEGT 345
FK RAR + +++ +DVT+ARKIWCFGP+ T
Sbjct: 612 FKVRARIMADEFGWDVTDARKIWCFGPDTT 641
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 128 bits (310), Expect = 6e-31
Identities = 61/93 (65%), Positives = 72/93 (77%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSYRE+V+E S LSKSPNKHNR+
Sbjct: 527 EHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRI 586
Query: 182 FMKAQPMPDGLPEDIDEGRVNPRDASRLALGIL 280
FM A+PM + L I+ G VNPRD ++ I+
Sbjct: 587 FMTAEPMSEELSVAIETGHVNPRDDFKVRARIM 619
Score = 87.4 bits (207), Expect = 2e-18
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 685
AIHRGGGQIIPT RR +YA L A P + EPV+L EIQ E A+GGIY VLN++RGHVF
Sbjct: 697 AIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVF 755
Score = 78.6 bits (185), Expect = 8e-16
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +3
Query: 351 NILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTE 509
N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR RFNI DV LH +
Sbjct: 644 NVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHAD 696
Score = 48.8 bits (111), Expect = 8e-07
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +1
Query: 256 FKTRARYLTEKYEYDVTEARKIWCFGPEGT 345
FK RAR + +++ +DVT+ARKIWCFGP+ T
Sbjct: 612 FKVRARIMADEFGWDVTDARKIWCFGPDTT 641
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 81.0 bits (191), Expect = 2e-16
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +2
Query: 512 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFRR 691
I+RGGGQIIPT RR Y+ LTA PRLMEPVY+ E+ P ++ IY +L RRRGHV +
Sbjct: 814 IYRGGGQIIPTARRVCYSSFLTASPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQD 873
Query: 692 VP 697
+P
Sbjct: 874 IP 875
Score = 72.1 bits (169), Expect = 7e-14
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EH + G GE++++ L DL ++ I I+ SDPV + ET + S C S +PNK NR+
Sbjct: 639 EHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRI 698
Query: 182 FMKAQPMPDGLPEDIDEGRVN 244
M +P+ G+ DI+ G+VN
Sbjct: 699 TMVVEPLEKGISNDIENGKVN 719
Score = 44.8 bits (101), Expect = 1e-05
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3
Query: 363 DCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTE 509
D K V LN +K+ + GFQW +EG + +E +R V F + DV L E
Sbjct: 766 DVDKNV--LNSVKEYIKQGFQWGTREGPLCDETIRNVNFRLMDVVLAPE 812
Score = 29.5 bits (63), Expect = 0.51
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 259 KTRARYLTEKYEYDVTEARKIWCFGPE 339
K + + + Y++D+ +R IW FGP+
Sbjct: 725 KRISEFFQKNYDWDLLASRSIWAFGPD 751
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 56.0 bits (129), Expect = 5e-09
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSK 157
EH++ AGE+HLE CLKDL E A I I+ S P+V YRET D L +K
Sbjct: 602 EHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVPYRETTIATPDLLAKNK 653
Score = 44.4 bits (100), Expect = 2e-05
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 527 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 682
GQ+I + + L PRLM +Y C++Q +G +YGV+++RRG V
Sbjct: 841 GQVISVVKESIRHGFLGWSPRLMLAMYSCDVQATSEVLGRVYGVVSKRRGRV 892
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 33.9 bits (74), Expect = 0.024
Identities = 14/44 (31%), Positives = 30/44 (68%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 133
E I++G GELHLE+ ++ + ++ + + P V++RET++++
Sbjct: 514 ETIISGMGELHLEVYVERMRREYK-VDCETGKPRVAFRETLSKK 556
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 572 LTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 682
L A P ++EP+ I P GG+ G L++R+ +
Sbjct: 668 LQANPMVLEPIMNVSITAPVEHQGGVIGNLDKRKATI 704
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 30.3 bits (65), Expect = 0.29
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +2
Query: 47 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 205
+K LEE+ + +K SD V + ++ + P +++FM PMP
Sbjct: 287 VKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMP 339
>SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 29.1 bits (62), Expect = 0.68
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -3
Query: 431 GPLESSHNR--VLNFIEVLNSFGAIHQDVGAVPSGPKHQILRASVTSYSYFSVRYRARVL 258
G L SSHN V+ + E+ + ++V G KH +LRA+ +Y YFS + +
Sbjct: 288 GLLVSSHNHPCVVEYSEISDEACKATENV----DGHKHLLLRAANIAYHYFSFDFLQKAS 343
Query: 257 KH 252
H
Sbjct: 344 LH 345
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 28.7 bits (61), Expect = 0.89
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 44 CLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGL 214
C++DL++ + K+SD Y T+ ++KS KHN+L K +P+P L
Sbjct: 214 CVRDLKKLEKKVK-KRSDLGNKYESTLNS-----LINKSVKKHNKLVKKHKPLPSTL 264
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 384 YLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTEPSIEVVAKSFQQLEDA 557
YLN + + FQ+ EGV+ L V NI+ L P+ V A + Q +E +
Sbjct: 6 YLNHVIRGIYNDFQFLVDEGVVERSALDWVHANIH---LQDGPASPVTAPAAQPVESS 60
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 307 EARKIWCFGPEGTAPTSWWIAPKEFSTSM 393
+AR + PEG P SWW P S SM
Sbjct: 307 KARHLIWLEPEGLDPNSWWY-PNGLSNSM 334
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 38 EICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNK 169
E+C +LE+D I +S +S + A++ DQL S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 339 LGAKAPNLTGFGNIVFVLFCKIPSAS 262
+G PNL GN +F L ++PS+S
Sbjct: 169 IGILPPNLNSIGNKMFSLKSRVPSSS 194
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1317
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 384 YLNEIKDSVVAGFQWAAKEGVMAEENLRGVR 476
YL+ + +AGFQ G+ ++N +GVR
Sbjct: 248 YLSPVVRRYLAGFQSGFLHGLKTKDNSKGVR 278
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/49 (20%), Positives = 21/49 (42%)
Frame = +3
Query: 471 VRFNIYDVTLHTEPSIEVVAKSFQQLEDACTHVC*LLSPVSWSLYIFVK 617
+ + H++P+ E + D H+C + WS++ F+K
Sbjct: 405 IELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLK 453
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,253,495
Number of Sequences: 5004
Number of extensions: 71005
Number of successful extensions: 239
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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