Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00119
(727 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 138 4e-33
01_06_0662 + 30987187-30987277,30987825-30990214 124 1e-28
04_01_0103 + 1082077-1082167,1083037-1085477 117 8e-27
02_04_0017 + 18937774-18937864,18938505-18940945 117 8e-27
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 91 6e-19
03_05_0511 + 25056018-25059107 56 2e-08
02_04_0148 - 20198407-20201424 51 8e-07
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 40 0.002
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 36 0.025
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353... 32 0.40
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 32 0.53
02_05_0787 - 31742685-31742702,31742703-31742744,31742993-317430... 31 0.70
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 29 2.8
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 29 5.0
03_02_0900 - 12262149-12262565,12262924-12263061,12263387-122634... 29 5.0
01_05_0779 + 25128320-25128518,25129048-25129141,25129867-251300... 29 5.0
10_08_0081 + 14710478-14710822 28 6.6
02_02_0340 + 9135846-9138377 28 8.7
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 28 8.7
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 28 8.7
01_05_0790 + 25253363-25254136,25259037-25259897 28 8.7
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 138 bits (334), Expect = 4e-33
Identities = 89/239 (37%), Positives = 123/239 (51%), Gaps = 7/239 (2%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EH + G GEL+L+ +KDL E ++ + +K +DPVV++ ETV + S C +++PNK N++
Sbjct: 650 EHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVTFCETVVDTSSMKCFAETPNKRNKI 709
Query: 182 FMKAQPMPDGLPEDIDEGRVNPRDASRLALGILQKSTNTMLPKPVRFGALAPRVPPQHPG 361
M A+P+ GL EDI+ G V+ + ++ + A P Q P
Sbjct: 710 TMVAEPLEKGLAEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFGPE--KQGPN 767
Query: 362 GLLQRSSVPQ*N*GLCCGWIPVGR*GRSYG*REFAWC*-------IQHL*CNTPY*AIHR 520
LL + + + L G +G RE C + L N +HR
Sbjct: 768 ILLDDTLSVEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPLHR 827
Query: 521 GGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFRRVP 697
GGGQIIPT RR +Y+ L A PRLMEPVY EIQ P V IY VL+RRRGHV VP
Sbjct: 828 GGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVTADVP 886
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTL 500
P PNIL+D + V+ LN +KDS+V GFQW A+EG + +E +R V+F I + +
Sbjct: 761 PEKQGPNILLDDTLSVEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANI 820
Query: 501 HTEP 512
EP
Sbjct: 821 APEP 824
Score = 35.1 bits (77), Expect = 0.057
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 274 YLTEKYEYDVTEARKIWCFGPEGTAP 351
+ ++Y++DV AR IW FGPE P
Sbjct: 741 FFRQRYQWDVLAARSIWAFGPEKQGP 766
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 124 bits (298), Expect = 1e-28
Identities = 60/96 (62%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNR 178
EHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPNKHNR
Sbjct: 523 EHIIAGAGELHLEICLKDLQEDFMGGAEITVSPPVVSFRETVLEKSCRTVMSKSPNKHNR 582
Query: 179 LFMKAQPMPDGLPEDIDEGRVNPRDASRLALGILQK 286
L+M+A+PM +GLPE IDEGR+ PRD ++ IL +
Sbjct: 583 LYMEARPMEEGLPEAIDEGRIGPRDDPKVRSKILSE 618
Score = 100 bits (240), Expect = 1e-21
Identities = 45/62 (72%), Positives = 52/62 (83%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFR 688
AIHRGGGQIIPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIY VLN++RGHVF
Sbjct: 696 AIHRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFE 755
Query: 689 RV 694
+
Sbjct: 756 EM 757
Score = 85.4 bits (202), Expect = 4e-17
Identities = 40/61 (65%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENL--RGVRFNIYDVTLHT 506
P PNI+VD KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+ RG+ F + DV LH+
Sbjct: 635 PETTGPNIVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHS 694
Query: 507 E 509
+
Sbjct: 695 D 695
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 232 GSRESPRCFKTRARYLTEKYEYDVTEARKIWCFGPEGTAP 351
G R+ P K R++ L+E++ +D A+KIWCFGPE T P
Sbjct: 604 GPRDDP---KVRSKILSEEFGWDKDLAKKIWCFGPETTGP 640
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 117 bits (282), Expect = 8e-27
Identities = 57/96 (59%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNR 178
EHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPNKHNR
Sbjct: 527 EHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNR 586
Query: 179 LFMKAQPMPDGLPEDIDEGRVNPRDASRLALGILQK 286
L+M+A+P+ +GL E ID+GR+ PRD ++ IL +
Sbjct: 587 LYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSE 622
Score = 102 bits (244), Expect = 3e-22
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFR 688
AIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVF
Sbjct: 698 AIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFE 757
Query: 689 RV 694
+
Sbjct: 758 EM 759
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTE 509
P PN++VD KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+RG+ F + DV LH +
Sbjct: 639 PETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHAD 697
Score = 44.4 bits (100), Expect = 9e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +1
Query: 154 KVAQQAQPSIHEGSAHA*WSARGH**GSRESPRCFKTRARYLTEKYEYDVTEARKIWCFG 333
++ +A+P + EG A A R G R+ P K R++ L+E++ +D A+KIWCFG
Sbjct: 586 RLYMEARP-LEEGLAEAIDDGRI---GPRDDP---KVRSKILSEEFGWDKDLAKKIWCFG 638
Query: 334 PEGTAP 351
PE T P
Sbjct: 639 PETTGP 644
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 117 bits (282), Expect = 8e-27
Identities = 57/96 (59%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNR 178
EHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPNKHNR
Sbjct: 527 EHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNR 586
Query: 179 LFMKAQPMPDGLPEDIDEGRVNPRDASRLALGILQK 286
L+M+A+P+ +GL E ID+GR+ PRD ++ IL +
Sbjct: 587 LYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSE 622
Score = 102 bits (244), Expect = 3e-22
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFR 688
AIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVF
Sbjct: 698 AIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVFE 757
Query: 689 RV 694
+
Sbjct: 758 EM 759
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTE 509
P PN++VD KGVQYLNEIKDSVVAGFQWA+KEG +AEEN+RG+ F + DV LH +
Sbjct: 639 PETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHAD 697
Score = 44.4 bits (100), Expect = 9e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +1
Query: 154 KVAQQAQPSIHEGSAHA*WSARGH**GSRESPRCFKTRARYLTEKYEYDVTEARKIWCFG 333
++ +A+P + EG A A R G R+ P K R++ L+E++ +D A+KIWCFG
Sbjct: 586 RLYMEARP-LEEGLAEAIDDGRI---GPRDDP---KVRSKILSEEFGWDKDLAKKIWCFG 638
Query: 334 PEGTAP 351
PE T P
Sbjct: 639 PETTGP 644
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 91.5 bits (217), Expect = 6e-19
Identities = 41/59 (69%), Positives = 49/59 (83%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTE 509
P PN+LVD KGVQYL+EIKDSVVAGFQWA+KEG +AEEN+RGV F + DVTLH++
Sbjct: 649 PETKGPNLLVDMCKGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELCDVTLHSD 707
Score = 89.4 bits (212), Expect = 3e-18
Identities = 44/93 (47%), Positives = 64/93 (68%), Gaps = 9/93 (9%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNR 178
EH++AG G+LHLEIC+KDL+ED I P+++YRETV + S + +SKSPNKHNR
Sbjct: 529 EHVIAGVGQLHLEICIKDLQEDFMGGAEIIVGPPIITYRETVTKNSCRTVMSKSPNKHNR 588
Query: 179 LFMKAQPM-PDGLPED-------IDEGRVNPRD 253
L+M+A+P+ + L +D ID+ R+ P+D
Sbjct: 589 LYMEARPLDKEDLQQDEPSLCKAIDDERIGPKD 621
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/58 (63%), Positives = 45/58 (77%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 682
+IHRGGGQ+IPT RR +YA LTA PRLMEP+Y +IQ P+ AVG +YGVLN R G +
Sbjct: 708 SIHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGEL 765
Score = 35.5 bits (78), Expect = 0.043
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 259 KTRARYLTEKYEYDVTEARKIWCFGPEGTAP 351
K R + L+E++ +D A+KIW FGPE P
Sbjct: 624 KERGKILSEEFGWDKDLAKKIWAFGPETKGP 654
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLS-KSPNK 169
EH++A AGE+HLE C KDLEE A + + SDP+VS++ET+ E L S K+P +
Sbjct: 576 EHVLAAAGEIHLERCKKDLEERFAKVKLVVSDPLVSFKETIEGEGLALIESLKAPRE 632
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 527 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFR 688
GQ+I + ++ +PRL+E +Y CE+ P +G Y VL+R+R V +
Sbjct: 867 GQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLK 920
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 51.2 bits (117), Expect = 8e-07
Identities = 20/44 (45%), Positives = 34/44 (77%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 133
EH++A AGE+HLE C+K+L+E A + ++ S P+VS+++T+ E
Sbjct: 556 EHVLAAAGEIHLEHCIKNLQERFARVQLEVSKPLVSFKDTIQGE 599
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 527 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFR 688
GQII R A +L ++PRL+EP+Y CE+ P +G +Y VL R V +
Sbjct: 843 GQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLK 896
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 569 LLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV--FRRVPGG 703
L A PRL+EP+ E+ PE +G + G LN RRG V F PGG
Sbjct: 644 LRKAGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPGG 690
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 8 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESD 139
++ G GELHL+I + L+ + + P V+YRE++++ S+
Sbjct: 500 VIEGMGELHLDIIVDRLKREFR-VEANVGAPQVNYRESISKISE 542
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAE--ESDQLCLSKS--PNK 169
E I++G GELHL+I ++ + ++ + K P V++RET+ + E D L +S +
Sbjct: 518 ETIISGMGELHLDIYVERIRREYK-VDAKVGKPRVNFRETITQRAEFDYLHKKQSGGQGQ 576
Query: 170 HNRLFMKAQPMP 205
+ R+ +P+P
Sbjct: 577 YGRVCGYIEPLP 588
Score = 34.7 bits (76), Expect = 0.076
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 566 CLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFRRVPGGRYTYVHC 724
C A+P ++EPV E++ P G + G +N+R+G + G T V C
Sbjct: 665 CYAAARPVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDTVVVC 717
>10_01_0323 +
3530246-3530446,3531091-3531726,3531860-3532018,
3532276-3532569,3557747-3557941,3558875-3559095,
3559190-3559373,3559797-3559973,3561319-3561824,
3561880-3562060
Length = 917
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 494 YIIDVESNTTQILFSHNSFLSGPLESSHNRVLNFIEVLNSFGAIHQDVGAVPSGPKHQI 318
Y I++ I+ S+N L G LES H+R L+ V A+H+ PS P H +
Sbjct: 644 YAINIAHRRVDIMDSNNYNLIGTLESDHHRALSKRIVKRLSDALHEG----PSVPPHMV 698
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 575 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFRRVPGG 703
T +L EP + ++ PE +G + +L +RRG + P G
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSG 539
>02_05_0787 -
31742685-31742702,31742703-31742744,31742993-31743022,
31743337-31744183,31744431-31744560,31744682-31744814
Length = 399
Score = 31.5 bits (68), Expect = 0.70
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 191 AQPMPDGLPEDIDEGRVNPRDASRLALGILQKSTNTMLPKPVRFGALAPRVPP 349
A MP G E + G ++P S AL + S+ + LP P+ AL+P +PP
Sbjct: 205 AAAMPGGDMEQMGAGLLSPPAMSSAALSPMSTSSLSPLPSPMSSTALSP-LPP 256
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 287 STNTMLPKPVRFGALAPRVPPQHPGGLLQRSSVP 388
S ++ P P R+GA A VPP+ PG Q +P
Sbjct: 49 SPSSTTPTPTRWGAGASAVPPRCPGPQDQHHGLP 82
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 131 ESDQLCLSKSPNKHNRLFMKAQPMPDGLPE 220
E + LCL PN+H + + A+ +P LPE
Sbjct: 42 EKENLCLYGFPNEHWEVNLPAEEVPPELPE 71
>03_02_0900 -
12262149-12262565,12262924-12263061,12263387-12263446,
12263557-12263619,12264181-12264243,12264420-12264482,
12265076-12265153,12265673-12266080
Length = 429
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 432 AKEGVMAEENLRGVRFNIYDVTLHTEPSIEVVAKSFQQLEDACTH 566
A+ V EE L ++ N YDV + E +++ +S + + DA TH
Sbjct: 180 AQNEVRLEEKLNNLQ-NGYDVLIKKEVALDNKVRSIEVINDALTH 223
>01_05_0779 +
25128320-25128518,25129048-25129141,25129867-25130078,
25130924-25131054,25131933-25132041,25132180-25132659,
25133194-25133531,25133810-25133977
Length = 576
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 388 SMKLRTLLWLDSSGPLRKELWLKRICVVLDSTSMM*HSILSH 513
S L L+ +DS G L K K+I +VLD + HS L H
Sbjct: 377 SRGLPDLMDVDSPGRLSKSARSKQITLVLDLDETLVHSTLDH 418
>10_08_0081 + 14710478-14710822
Length = 114
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -2
Query: 165 LGDFERQSWSDSSATVSRYDTTGSDFLIGMQAWSS-SRSLRQISRWSSPAPAT 10
+ R SWSD V+R T+ + + W+ R +R S WSS AP T
Sbjct: 1 MSHLRRLSWSDQ--VVARQPTSEEEDVDAGGRWTEVRRKVRPHSWWSSNAPTT 51
>02_02_0340 + 9135846-9138377
Length = 843
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 105 TTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCS 1
TTGSD L G+Q + R+L I+ P +CS
Sbjct: 801 TTGSDVLDGLQPHYNLRALGIINHGGPTGPGWLCS 835
>02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +3
Query: 318 DLVLWPRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRF 479
++ + P G+ L++ +G+Q + +IKD W + +A+E++ G+ F
Sbjct: 1077 EIYVGPLGHNSCHLINYFEGIQGVRKIKDGYNPA-TWMLEVTTLAQEDILGINF 1129
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 449 HNSFLSGPLESSHNRVLNFIEVLNSF 372
HN L+ +E+SH VL FI +L SF
Sbjct: 183 HNGNLTNRMETSHEEVLPFIFLLLSF 208
>01_05_0790 + 25253363-25254136,25259037-25259897
Length = 544
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 569 LLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFRRV---PGG 703
++T PR+M +L E +V VGG V+ RG F + PGG
Sbjct: 168 VVTGAPRVMVEWFLKEYMAADVVVGGELHVVRVGRGRYFTGMLCGPGG 215
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,730,559
Number of Sequences: 37544
Number of extensions: 533141
Number of successful extensions: 1598
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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