Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00119
         (727 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   1.0  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   7.3  
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    23   7.3  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 143 AGPIPQLRSHGTTRQGQTS*LECKHG 66
           AGPIP  + H   +Q Q S L  KHG
Sbjct: 244 AGPIPSQQKHQQHQQQQQSVLLPKHG 269



 Score = 23.0 bits (47), Expect = 9.6
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -3

Query: 482 VESNTTQILFSHNSFLSGPLESSHNRVLNFIEVLNSFGAIHQDVGAVPSGPKHQ 321
           + S ++  L S+ S LS P  S    +L   +  +  GA  Q  G +PS  KHQ
Sbjct: 203 ISSASSPNLSSNGSTLSSPSGSRMEYLLPHQQ--HPPGAGVQGAGPIPSQQKHQ 254


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 122 VAEESDQLCLSKSPNKHNRLFMKAQPMP 205
           V    + LC + SPN +    +  QP P
Sbjct: 154 VNSRGNTLCAASSPNAYTNTTIAVQPAP 181


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 486 YDVTLHTEPSIEVVAKSFQQLED 554
           Y VT    PSI  + +SF Q+ D
Sbjct: 182 YQVTEQDAPSINTLVRSFGQIVD 204


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,612
Number of Sequences: 2352
Number of extensions: 17657
Number of successful extensions: 56
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)