Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00119
(727 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15805-1|CAA33804.1| 844|Drosophila melanogaster protein ( Dros... 165 5e-41
AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p pro... 164 9e-41
AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC... 164 9e-41
AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB... 164 9e-41
AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA... 164 9e-41
AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p pro... 80 3e-15
AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA... 80 3e-15
AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p pro... 50 3e-06
AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-P... 50 3e-06
BT003756-1|AAO41435.1| 674|Drosophila melanogaster RE71343p pro... 48 2e-05
AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA... 42 6e-04
BT023763-1|AAZ41771.1| 639|Drosophila melanogaster RE37786p pro... 41 0.002
AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-P... 38 0.014
>X15805-1|CAA33804.1| 844|Drosophila melanogaster protein (
Drosophila DMEF2 genefor the translation elongation
factor 2. ).
Length = 844
Score = 165 bits (401), Expect = 5e-41
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV+EESDQ+CLSKSPNKHNRL
Sbjct: 529 EHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNKHNRL 588
Query: 182 FMKAQPMPDGLPEDIDEGRVNPRD 253
MKA PMPDGLPEDID G V+ +D
Sbjct: 589 LMKALPMPDGLPEDIDNGEVSAKD 612
Score = 124 bits (300), Expect = 9e-29
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 685
AIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF
Sbjct: 699 AIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 757
Score = 105 bits (253), Expect = 5e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTE 509
P G PN ++DC+K VQYLNEIKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH +
Sbjct: 640 PDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHAD 698
Score = 68.5 bits (160), Expect = 9e-12
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 256 FKTRARYLTEKYEYDVTEARKIWCFGPEGTAP 351
FK RARYL+EKY+YDVTEARKIWCFGP+GT P
Sbjct: 614 FKARARYLSEKYDYDVTEARKIWCFGPDGTGP 645
>AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p
protein.
Length = 844
Score = 164 bits (399), Expect = 9e-41
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV+EESDQ+CLSKSPNKHNRL
Sbjct: 529 EHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNKHNRL 588
Query: 182 FMKAQPMPDGLPEDIDEGRVNPRD 253
MKA PMPDGLPEDID G V+ +D
Sbjct: 589 LMKALPMPDGLPEDIDNGDVSAKD 612
Score = 124 bits (300), Expect = 9e-29
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 685
AIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF
Sbjct: 699 AIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 757
Score = 105 bits (253), Expect = 5e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTE 509
P G PN ++DC+K VQYLNEIKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH +
Sbjct: 640 PDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHAD 698
Score = 68.5 bits (160), Expect = 9e-12
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 256 FKTRARYLTEKYEYDVTEARKIWCFGPEGTAP 351
FK RARYL+EKY+YDVTEARKIWCFGP+GT P
Sbjct: 614 FKARARYLSEKYDYDVTEARKIWCFGPDGTGP 645
>AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC,
isoform C protein.
Length = 832
Score = 164 bits (399), Expect = 9e-41
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV+EESDQ+CLSKSPNKHNRL
Sbjct: 517 EHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNKHNRL 576
Query: 182 FMKAQPMPDGLPEDIDEGRVNPRD 253
MKA PMPDGLPEDID G V+ +D
Sbjct: 577 LMKALPMPDGLPEDIDNGDVSAKD 600
Score = 124 bits (300), Expect = 9e-29
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 685
AIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF
Sbjct: 687 AIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 745
Score = 105 bits (253), Expect = 5e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTE 509
P G PN ++DC+K VQYLNEIKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH +
Sbjct: 628 PDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHAD 686
Score = 68.5 bits (160), Expect = 9e-12
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 256 FKTRARYLTEKYEYDVTEARKIWCFGPEGTAP 351
FK RARYL+EKY+YDVTEARKIWCFGP+GT P
Sbjct: 602 FKARARYLSEKYDYDVTEARKIWCFGPDGTGP 633
>AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB,
isoform B protein.
Length = 832
Score = 164 bits (399), Expect = 9e-41
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV+EESDQ+CLSKSPNKHNRL
Sbjct: 517 EHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNKHNRL 576
Query: 182 FMKAQPMPDGLPEDIDEGRVNPRD 253
MKA PMPDGLPEDID G V+ +D
Sbjct: 577 LMKALPMPDGLPEDIDNGDVSAKD 600
Score = 124 bits (300), Expect = 9e-29
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 685
AIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF
Sbjct: 687 AIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 745
Score = 105 bits (253), Expect = 5e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTE 509
P G PN ++DC+K VQYLNEIKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH +
Sbjct: 628 PDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHAD 686
Score = 68.5 bits (160), Expect = 9e-12
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 256 FKTRARYLTEKYEYDVTEARKIWCFGPEGTAP 351
FK RARYL+EKY+YDVTEARKIWCFGP+GT P
Sbjct: 602 FKARARYLSEKYDYDVTEARKIWCFGPDGTGP 633
>AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA,
isoform A protein.
Length = 844
Score = 164 bits (399), Expect = 9e-41
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV+EESDQ+CLSKSPNKHNRL
Sbjct: 529 EHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNKHNRL 588
Query: 182 FMKAQPMPDGLPEDIDEGRVNPRD 253
MKA PMPDGLPEDID G V+ +D
Sbjct: 589 LMKALPMPDGLPEDIDNGDVSAKD 612
Score = 124 bits (300), Expect = 9e-29
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 685
AIHRGGGQIIPTTRRCLYA +TA+PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF
Sbjct: 699 AIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 757
Score = 105 bits (253), Expect = 5e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTE 509
P G PN ++DC+K VQYLNEIKDSVVAGFQWA+KEG++A+ENLRGVRFNIYDVTLH +
Sbjct: 640 PDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHAD 698
Score = 68.5 bits (160), Expect = 9e-12
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 256 FKTRARYLTEKYEYDVTEARKIWCFGPEGTAP 351
FK RARYL+EKY+YDVTEARKIWCFGP+GT P
Sbjct: 614 FKARARYLSEKYDYDVTEARKIWCFGPDGTGP 645
>AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p
protein.
Length = 975
Score = 79.8 bits (188), Expect = 3e-15
Identities = 35/80 (43%), Positives = 55/80 (68%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EH++ G GEL+L+ + DL + ++ I IK +DPVV++ ETV E S C +++PNK N++
Sbjct: 629 EHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSSLKCFAETPNKKNKI 688
Query: 182 FMKAQPMPDGLPEDIDEGRV 241
M ++P+ GL EDI+ G V
Sbjct: 689 TMISEPLEKGLAEDIENGTV 708
Score = 78.6 bits (185), Expect = 8e-15
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFR 688
A+HRGGGQIIPT RR Y+ L A PRLMEP E+Q P V +Y VL RRRGHV +
Sbjct: 803 ALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQ 862
Query: 689 RVP 697
P
Sbjct: 863 DAP 865
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTL 500
P PNILVD + + L +KDS+V GFQW +EG + EE +R V+F I D +
Sbjct: 740 PDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDGVI 799
Query: 501 HTE 509
E
Sbjct: 800 ANE 802
Score = 33.9 bits (74), Expect = 0.23
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 259 KTRARYLTEKYEYDVTEARKIWCFGPEGTAP 351
K + Y++D+ AR IW FGP+ T P
Sbjct: 715 KRIGEFFQVNYDWDLLAARSIWAFGPDSTGP 745
>AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA
protein.
Length = 975
Score = 79.8 bits (188), Expect = 3e-15
Identities = 35/80 (43%), Positives = 55/80 (68%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EH++ G GEL+L+ + DL + ++ I IK +DPVV++ ETV E S C +++PNK N++
Sbjct: 629 EHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSSLKCFAETPNKKNKI 688
Query: 182 FMKAQPMPDGLPEDIDEGRV 241
M ++P+ GL EDI+ G V
Sbjct: 689 TMISEPLEKGLAEDIENGTV 708
Score = 78.6 bits (185), Expect = 8e-15
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFR 688
A+HRGGGQIIPT RR Y+ L A PRLMEP E+Q P V +Y VL RRRGHV +
Sbjct: 803 ALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQ 862
Query: 689 RVP 697
P
Sbjct: 863 DAP 865
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTL 500
P PNILVD + + L +KDS+V GFQW +EG + EE +R V+F I D +
Sbjct: 740 PDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDGVI 799
Query: 501 HTE 509
E
Sbjct: 800 ANE 802
Score = 33.9 bits (74), Expect = 0.23
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 259 KTRARYLTEKYEYDVTEARKIWCFGPEGTAP 351
K + Y++D+ AR IW FGP+ T P
Sbjct: 715 KRIGEFFQVNYDWDLLAARSIWAFGPDSTGP 745
>AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p
protein.
Length = 949
Score = 50.0 bits (114), Expect = 3e-06
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 124
EH++ GE+H+E C+ DLE+ +A I + S P+VS+RET+
Sbjct: 543 EHVITTLGEVHVEKCVHDLEQSYAKIKVNVSKPIVSFRETI 583
Score = 32.3 bits (70), Expect = 0.69
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 527 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 682
GQ++ + RL+ P+Y C I +G +Y V+ RR G +
Sbjct: 788 GQVLTAAKEVCRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKI 839
>AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-PB
protein.
Length = 1033
Score = 50.0 bits (114), Expect = 3e-06
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 124
EH++ GE+H+E C+ DLE+ +A I + S P+VS+RET+
Sbjct: 627 EHVITTLGEVHVEKCVHDLEQSYAKIKVNVSKPIVSFRETI 667
Score = 32.3 bits (70), Expect = 0.69
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 527 GQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 682
GQ++ + RL+ P+Y C I +G +Y V+ RR G +
Sbjct: 872 GQVLTAAKEVCRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKI 923
>BT003756-1|AAO41435.1| 674|Drosophila melanogaster RE71343p
protein.
Length = 674
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 136
EH++ G GEL+L+ + DL + ++ I IK +DPVV++ ETV E S
Sbjct: 629 EHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETS 673
>AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA
protein.
Length = 745
Score = 42.3 bits (95), Expect = 6e-04
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAE--ESDQLCLSKS--PNK 169
E +V+G GELHLEI + +E ++ C P+ P V++RET+ E D L +S +
Sbjct: 484 ETLVSGMGELHLEIYAQRMEREYGC-PVTLGKPKVAFRETLVGPCEFDYLHKKQSGGSGQ 542
Query: 170 HNRLFMKAQPMP---DGLPEDIDE 232
+ R+ +P+P + L E +DE
Sbjct: 543 YARIIGVMEPLPPNQNTLLEFVDE 566
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 587 RLMEPVYLCEIQCPEVAVGGIYGVLNRRRG 676
+++EP+ L E+ PE G + G L++R G
Sbjct: 638 QILEPIMLVEVTAPEEFQGAVMGHLSKRHG 667
>BT023763-1|AAZ41771.1| 639|Drosophila melanogaster RE37786p
protein.
Length = 639
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV 124
E +V+G GELHLEI + +E ++ C P+ P V++RET+
Sbjct: 484 ETLVSGMGELHLEIYAQRMEREYGC-PVTLGKPKVAFRETL 523
>AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-PA
protein.
Length = 692
Score = 37.9 bits (84), Expect = 0.014
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 533 IIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFRRVPGG 703
++ T +C+ L T+ RL+EP+ +I P + GI L+RRR + +P G
Sbjct: 578 VMATAAQCVQKLLSTSGTRLLEPIMALQIVAPSERISGIMADLSRRRALINDVLPKG 634
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,830,479
Number of Sequences: 53049
Number of extensions: 859180
Number of successful extensions: 2250
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2250
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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