Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00119
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 155 4e-38
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 152 3e-37
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 75 4e-14
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 75 4e-14
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 40 0.001
AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical ... 32 0.48
Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical pr... 30 1.5
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 30 1.5
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81142-4|CAB03506.1| 338|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 5.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 155 bits (375), Expect = 4e-38
Identities = 71/93 (76%), Positives = 78/93 (83%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL
Sbjct: 537 EHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRL 596
Query: 182 FMKAQPMPDGLPEDIDEGRVNPRDASRLALGIL 280
AQPMPDGL +DI+ G VN RD + IL
Sbjct: 597 HCTAQPMPDGLADDIEGGTVNARDEFKARAKIL 629
Score = 111 bits (268), Expect = 4e-25
Identities = 50/59 (84%), Positives = 53/59 (89%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 685
AIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVF
Sbjct: 707 AIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVF 765
Score = 100 bits (239), Expect = 1e-21
Identities = 55/131 (41%), Positives = 70/131 (53%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTEP 512
P G PN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGVRFN++DVTLH +
Sbjct: 648 PDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADA 707
Query: 513 SIEVVAKSFQQLEDACTHVC*LLSPVSWSLYIFVKFSVLK*LWXXXXXXXXXXXXXXXEE 692
+ P V+ + EE
Sbjct: 708 IHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEE 767
Query: 693 SQVAGTPMFIV 725
SQV GTPMF+V
Sbjct: 768 SQVTGTPMFVV 778
Score = 64.9 bits (151), Expect = 6e-11
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +1
Query: 256 FKTRARYLTEKYEYDVTEARKIWCFGPEGTAP 351
FK RA+ L EKYEYDVTEARKIWCFGP+GT P
Sbjct: 622 FKARAKILAEKYEYDVTEARKIWCFGPDGTGP 653
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 152 bits (368), Expect = 3e-37
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL
Sbjct: 537 EHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRL 596
Query: 182 FMKAQPMPDGLPEDIDEGRVNPRD 253
AQPMPDGL +DI+ G V+ RD
Sbjct: 597 HCTAQPMPDGLADDIEGGTVSARD 620
Score = 111 bits (268), Expect = 4e-25
Identities = 50/59 (84%), Positives = 53/59 (89%)
Frame = +2
Query: 509 AIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 685
AIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNRRRGHVF
Sbjct: 707 AIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVF 765
Score = 100 bits (239), Expect = 1e-21
Identities = 55/131 (41%), Positives = 70/131 (53%)
Frame = +3
Query: 333 PRGYRPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTEP 512
P G PN+L+D +KGVQYLNEIKDSVVAGFQWA +EGV+++EN+RGVRFN++DVTLH +
Sbjct: 648 PDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADA 707
Query: 513 SIEVVAKSFQQLEDACTHVC*LLSPVSWSLYIFVKFSVLK*LWXXXXXXXXXXXXXXXEE 692
+ P V+ + EE
Sbjct: 708 IHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEE 767
Query: 693 SQVAGTPMFIV 725
SQV GTPMF+V
Sbjct: 768 SQVTGTPMFVV 778
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +1
Query: 256 FKTRARYLTEKYEYDVTEARKIWCFGPEGTAP 351
FK RA+Y EKYEY VTEARKIWCFGP+GT P
Sbjct: 622 FKARAKYPGEKYEYAVTEARKIWCFGPDGTGP 653
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/62 (53%), Positives = 40/62 (64%)
Frame = +2
Query: 512 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFRR 691
++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV
Sbjct: 805 LYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTD 864
Query: 692 VP 697
P
Sbjct: 865 AP 866
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/76 (39%), Positives = 50/76 (65%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EH++ G GE +++ + D+ + + I IK +DPVV++ ETV E S C +++PNK N++
Sbjct: 630 EHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKI 689
Query: 182 FMKAQPMPDGLPEDID 229
M A+P+ L EDI+
Sbjct: 690 TMMAEPLEKQLDEDIE 705
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Frame = +3
Query: 348 PNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTEP 512
PNIL+D + + L+ +++S+V GFQWA +EG + EE +R V+F + D + TEP
Sbjct: 746 PNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEP 804
Score = 34.3 bits (75), Expect = 0.090
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 274 YLTEKYEYDVTEARKIWCFGPEGTAP 351
+ KY +D+ AR IW FGP+ T P
Sbjct: 721 FFQTKYNWDLLAARSIWAFGPDTTGP 746
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/62 (53%), Positives = 40/62 (64%)
Frame = +2
Query: 512 IHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFRR 691
++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y VL +RRGHV
Sbjct: 680 LYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTD 739
Query: 692 VP 697
P
Sbjct: 740 AP 741
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/76 (39%), Positives = 50/76 (65%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
EH++ G GE +++ + D+ + + I IK +DPVV++ ETV E S C +++PNK N++
Sbjct: 505 EHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKI 564
Query: 182 FMKAQPMPDGLPEDID 229
M A+P+ L EDI+
Sbjct: 565 TMMAEPLEKQLDEDIE 580
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Frame = +3
Query: 348 PNILVDCSKGVQY----LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTEP 512
PNIL+D + + L+ +++S+V GFQWA +EG + EE +R V+F + D + TEP
Sbjct: 621 PNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAIATEP 679
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 274 YLTEKYEYDVTEARKIWCFGPEGTAP 351
+ KY +D+ AR IW FG + T P
Sbjct: 596 FFQTKYNWDLLAARSIWAFGLDTTGP 621
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/74 (32%), Positives = 37/74 (50%)
Frame = +2
Query: 2 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRL 181
E IV+G GELHLEI + ++ ++ C P++ P V+YRE + K
Sbjct: 487 ETIVSGMGELHLEIYAQRMKSEYNC-PVELGKPTVAYRECLGSPYKFHFRHKKQTGGQGQ 545
Query: 182 FMKAQPMPDGLPED 223
F + + + D LP D
Sbjct: 546 FGEIEGVIDPLPSD 559
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +2
Query: 20 AGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 136
AGE+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 522 AGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETVIEDS 559
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +2
Query: 20 AGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 136
AGE+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 522 AGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETVIEDS 559
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 524 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHV 682
GGQ++ + A RL+ +Y C + A+G ++ VL++R+ V
Sbjct: 732 GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQALGKVHAVLSQRKSKV 784
>AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2A.1 protein.
Length = 382
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 568 TCVQASSSCWNDLATTSMDGSVWS 497
TC + +S W D++TT +DG +WS
Sbjct: 243 TCTKDNSFEWTDMSTTGIDGFLWS 266
>Z74030-4|CAA98436.1| 113|Caenorhabditis elegans Hypothetical
protein D1054.7 protein.
Length = 113
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 589 TGLSS*QTCVQASSSCWNDLATTSMDGSVW 500
TG+ TC + +S W D +TT DG +W
Sbjct: 41 TGMMLTATCTKLNSFEWTDGSTTGTDGFIW 70
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 71 ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEG 235
AC+PI VS E ++ES+ K +K + +KA + DG+P D D+G
Sbjct: 228 ACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP-DCDDG 281
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 394 KLRTLLWLDSSGPLRKELWLKRICVVLDST 483
K++TL+W PL KEL L+R+ V D +
Sbjct: 256 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 285
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 394 KLRTLLWLDSSGPLRKELWLKRICVVLDST 483
K++TL+W PL KEL L+R+ V D +
Sbjct: 270 KVQTLIWAIGRDPLTKELNLERVGVKTDKS 299
>Z81142-4|CAB03506.1| 338|Caenorhabditis elegans Hypothetical
protein ZK1037.7 protein.
Length = 338
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 343 TAPTSWWIAPKEFSTSMKLRTLLWLDSSGPLRKELWLKRICVVL 474
TA TS + P FS +MKL T+L+ R+ +W I +++
Sbjct: 6 TAITSHLLFPPIFSPTMKLLTILFFHFLVISRRRMWTSAINILM 49
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 524 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRR 670
G Q + T RCL A +L + +M + + + A G ++ ++NR+
Sbjct: 1017 GDQTVDKTFRCLMAMMLCCEGIIMSAQFFPQFVGAKSAAGQMFNLINRQ 1065
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,293,057
Number of Sequences: 27780
Number of extensions: 415958
Number of successful extensions: 1163
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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