Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00118
(391 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription fac... 84 1e-16
BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. 84 1e-16
BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. 84 1e-16
AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription fac... 84 1e-16
AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription fac... 84 1e-16
AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens ... 84 1e-16
M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. 77 3e-14
X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3... 76 4e-14
X53281-1|CAA37376.1| 162|Homo sapiens general transcription fac... 76 4e-14
X53280-1|CAA37375.1| 206|Homo sapiens general transcription fac... 76 4e-14
BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription fac... 76 4e-14
BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription fac... 76 4e-14
AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BT... 76 4e-14
M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. 72 6e-13
M90357-1|AAA58398.1| 158|Homo sapiens basic transcription facto... 59 4e-09
M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein. 50 4e-06
BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein. 48 1e-05
>BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL+VN I GIEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH
Sbjct: 44 KKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGH 88
Score = 76.2 bits (179), Expect = 4e-14
Identities = 37/44 (84%), Positives = 38/44 (86%)
Frame = +1
Query: 124 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DDKKLQSSLK
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLK 44
>BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein.
Length = 158
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL+VN I GIEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH
Sbjct: 44 KKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGH 88
Score = 76.2 bits (179), Expect = 4e-14
Identities = 37/44 (84%), Positives = 38/44 (86%)
Frame = +1
Query: 124 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DDKKLQSSLK
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLK 44
>BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein.
Length = 153
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL+VN I GIEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH
Sbjct: 39 KKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGH 83
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +1
Query: 175 KGTPRRKKKVVHVTAATDDKKLQSSLK 255
+GT RRKKKVVH TA DDKKLQSSLK
Sbjct: 13 QGTARRKKKVVHRTATADDKKLQSSLK 39
>AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL+VN I GIEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH
Sbjct: 44 KKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGH 88
Score = 76.2 bits (179), Expect = 4e-14
Identities = 37/44 (84%), Positives = 38/44 (86%)
Frame = +1
Query: 124 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DDKKLQSSLK
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLK 44
>AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL+VN I GIEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH
Sbjct: 44 KKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGH 88
Score = 76.2 bits (179), Expect = 4e-14
Identities = 37/44 (84%), Positives = 38/44 (86%)
Frame = +1
Query: 124 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DDKKLQSSLK
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLK 44
>AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
TRANSCRIPTION FACTOR BTF3. ).
Length = 158
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL+VN I GIEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH
Sbjct: 44 KKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGH 88
Score = 76.2 bits (179), Expect = 4e-14
Identities = 37/44 (84%), Positives = 38/44 (86%)
Frame = +1
Query: 124 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DDKKLQSSLK
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLK 44
>M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein.
Length = 111
Score = 76.6 bits (180), Expect = 3e-14
Identities = 34/45 (75%), Positives = 37/45 (82%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL VN IPGIEEVNM GTVIHFNNP+ QASLAANTF +TGH
Sbjct: 45 KKLGVNNIPGIEEVNMFTHQGTVIHFNNPEVQASLAANTFTMTGH 89
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/49 (55%), Positives = 33/49 (67%)
Frame = +1
Query: 109 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
+K + MN +KL K Q++V G KGT R KKVVH TA +DKK Q SLK
Sbjct: 1 MKETIMN-QKLTKRQAEVHTGRKGTAHR-KKVVHTTA--EDKKFQFSLK 45
>X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3
protein.
Length = 162
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL VN I GIEEVNM GTVIHFNNPK QASLAANTF ITGH
Sbjct: 49 KKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH 93
Score = 75.8 bits (178), Expect = 5e-14
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = +1
Query: 109 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DDKKLQ SLK
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLK 49
>X53281-1|CAA37376.1| 162|Homo sapiens general transcription factor
protein.
Length = 162
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL VN I GIEEVNM GTVIHFNNPK QASLAANTF ITGH
Sbjct: 49 KKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH 93
Score = 75.8 bits (178), Expect = 5e-14
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = +1
Query: 109 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DDKKLQ SLK
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLK 49
>X53280-1|CAA37375.1| 206|Homo sapiens general transcription factor
protein.
Length = 206
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL VN I GIEEVNM GTVIHFNNPK QASLAANTF ITGH
Sbjct: 93 KKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH 137
Score = 75.8 bits (178), Expect = 5e-14
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = +1
Query: 109 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DDKKLQ SLK
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLK 93
>BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL VN I GIEEVNM GTVIHFNNPK QASLAANTF ITGH
Sbjct: 49 KKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH 93
Score = 75.8 bits (178), Expect = 5e-14
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = +1
Query: 109 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DDKKLQ SLK
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLK 49
>BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL VN I GIEEVNM GTVIHFNNPK QASLAANTF ITGH
Sbjct: 49 KKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH 93
Score = 75.8 bits (178), Expect = 5e-14
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = +1
Query: 109 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DDKKLQ SLK
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLK 49
>AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BTF 3
protein.
Length = 162
Score = 76.2 bits (179), Expect = 4e-14
Identities = 35/45 (77%), Positives = 36/45 (80%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL VN I GIEEVNM GTVIHFNNPK QASLAANTF ITGH
Sbjct: 49 KKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH 93
Score = 75.8 bits (178), Expect = 5e-14
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = +1
Query: 109 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLK 255
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DDKKLQ SLK
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLK 49
>M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein.
Length = 214
Score = 72.1 bits (169), Expect = 6e-13
Identities = 33/45 (73%), Positives = 35/45 (77%)
Frame = +3
Query: 252 QKLSVNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+KL VN I GIE+VNM GTVIHFNNPK QASLA NTF ITGH
Sbjct: 79 KKLQVNNISGIEKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGH 123
Score = 65.3 bits (152), Expect = 7e-11
Identities = 33/53 (62%), Positives = 37/53 (69%)
Frame = +1
Query: 106 TLKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLKSCQ 264
T +++ KL KLQ+QVRIGGKGT RKKKV H TA DDKKLQ SLK Q
Sbjct: 30 TCRSTDHEPGKLAKLQAQVRIGGKGTAHRKKKVFHRTATADDKKLQFSLKKLQ 82
>M90357-1|AAA58398.1| 158|Homo sapiens basic transcription factor
3a protein.
Length = 158
Score = 59.3 bits (137), Expect = 4e-09
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = +3
Query: 288 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGH 386
+VNM GTVIHFNNPK QASLAANTF ITGH
Sbjct: 67 KVNMFTNQGTVIHFNNPKVQASLAANTFTITGH 99
Score = 35.9 bits (79), Expect = 0.047
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1
Query: 109 LKNSRMNSEKLKKLQSQVRIGGK 177
+K + MN EKL KLQ+QVRIGGK
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGK 67
>M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein.
Length = 67
Score = 49.6 bits (113), Expect = 4e-06
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = +1
Query: 109 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDKKLQSSLKSCQ 264
+K + MN EKL KLQ++V IGG +KKVVH TA +DKK Q SLK +
Sbjct: 1 MKETIMNQEKLAKLQAKVPIGGTA---HRKKVVHRTATANDKKRQFSLKKLE 49
>BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein.
Length = 102
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +3
Query: 291 VNMIKEDGTVIHFNNPKAQASLAANTFAITGHG 389
+N K T+IHFNNP+ QA LA NTF ITGHG
Sbjct: 1 MNQEKLQRTMIHFNNPEVQAFLAVNTFTITGHG 33
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,851,282
Number of Sequences: 237096
Number of extensions: 983925
Number of successful extensions: 5787
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5786
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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