Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00118
         (391 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   2.2  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   2.9  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   2.9  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   5.0  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   8.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   8.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   8.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   8.7  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 234 FVICGRSNVNNLLLASRCA 178
           F I G +NVNNL+  +RCA
Sbjct: 401 FRILG-ANVNNLIKNTRCA 418


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 234 FVICGRSNVNNLLLASRCA 178
           F I G +NVN+L+  SRCA
Sbjct: 398 FQILG-ANVNDLIRNSRCA 415


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 234 FVICGRSNVNNLLLASRCA 178
           F I G +NVN+L++ +RCA
Sbjct: 567 FRILG-ANVNDLIMNTRCA 584


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 210 VNNLLLASRCAL 175
           VNN+L AS C+L
Sbjct: 279 VNNILAASACSL 290


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 216 SNVNNLLLASRC 181
           +NVN L+L +RC
Sbjct: 405 ANVNELILNTRC 416


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 2   TRAYDQVTWKTRTVASCNN 58
           TR   + +W TR    CNN
Sbjct: 347 TRIIGRRSWVTRESQICNN 365


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 216 SNVNNLLLASRC 181
           +NVN L+L +RC
Sbjct: 405 ANVNELILNTRC 416


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 216 SNVNNLLLASRC 181
           +NVN L+L +RC
Sbjct: 405 ANVNELILNTRC 416


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,968
Number of Sequences: 438
Number of extensions: 1870
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)