Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00117
(610 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61300.1 68416.m06860 C2 domain-containing protein anthranila... 35 0.048
At3g57880.1 68416.m06452 C2 domain-containing protein contains I... 35 0.048
At1g51570.1 68414.m05804 C2 domain-containing protein contains I... 34 0.064
At4g11610.1 68417.m01859 C2 domain-containing protein contains I... 34 0.085
At3g13750.1 68416.m01735 beta-galactosidase, putative / lactase,... 34 0.085
At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM dom... 34 0.085
At1g45130.1 68414.m05173 beta-galactosidase, putative / lactase,... 33 0.11
At5g12970.1 68418.m01487 C2 domain-containing protein contains I... 33 0.20
At1g22610.1 68414.m02823 C2 domain-containing protein contains I... 32 0.26
At3g45800.1 68416.m04957 hypothetical protein 32 0.34
At2g28470.1 68415.m03460 beta-galactosidase, putative / lactase,... 31 0.60
At4g36360.2 68417.m05164 beta-galactosidase, putative / lactase,... 31 0.79
At4g36360.1 68417.m05163 beta-galactosidase, putative / lactase,... 31 0.79
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 31 0.79
At4g26140.2 68417.m03763 beta-galactosidase, putative / lactase,... 30 1.0
At4g26140.1 68417.m03762 beta-galactosidase, putative / lactase,... 30 1.0
At2g22125.1 68415.m02628 C2 domain-containing protein contains P... 30 1.0
At1g05500.1 68414.m00561 C2 domain-containing protein similar to... 29 1.8
At5g63810.1 68418.m08008 beta-galactosidase, putative / lactase,... 29 2.4
At3g20890.1 68416.m02641 heterogeneous nuclear ribonucleoprotein... 29 2.4
At4g23150.1 68417.m03341 protein kinase family protein contains ... 29 3.2
At5g63800.1 68418.m08007 glycosyl hydrolase family 35 protein si... 28 4.2
At4g35010.1 68417.m04965 glycosyl hydrolase family 35 protein si... 28 4.2
At4g02280.1 68417.m00309 sucrose synthase, putative / sucrose-UD... 28 4.2
At1g70520.1 68414.m08116 protein kinase family protein contains ... 28 4.2
At1g30720.1 68414.m03755 FAD-binding domain-containing protein s... 28 5.6
At1g21570.1 68414.m02697 zinc finger (CCCH-type) family protein ... 28 5.6
At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,... 27 7.4
At3g52840.1 68416.m05823 beta-galactosidase, putative / lactase,... 27 7.4
At5g60600.2 68418.m07603 1-hydroxy-2-methyl-2-(E)-butenyl 4-diph... 27 9.7
At5g60600.1 68418.m07602 1-hydroxy-2-methyl-2-(E)-butenyl 4-diph... 27 9.7
At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP glucosyl... 27 9.7
At5g15510.1 68418.m01816 expressed protein 27 9.7
At3g55430.1 68416.m06156 glycosyl hydrolase family 17 protein / ... 27 9.7
At2g16730.1 68415.m01919 glycosyl hydrolase family 35 protein si... 27 9.7
>At3g61300.1 68416.m06860 C2 domain-containing protein anthranilate
phosphoribosyltransferase (fragment) - Pisum sativum,
PIR:T06460
Length = 972
Score = 34.7 bits (76), Expect = 0.048
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +1
Query: 265 IVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTK-PAWCE--RFNIYLYEENNL 435
I +++A++LP T Y + KLGN + K++ K + P W E F+ + N L
Sbjct: 253 IKIVKARNLPSMDLTGSLDPYIEVKLGNYTGKTKHFEKNQNPVWNEVFAFSKSNQQSNVL 312
Query: 436 EVSLWHKGKQK-NFMGRCVIDLSRL 507
EV + K K +F+G DL+++
Sbjct: 313 EVIVMDKDMVKDDFVGLIRFDLNQI 337
>At3g57880.1 68416.m06452 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 773
Score = 34.7 bits (76), Expect = 0.048
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = +1
Query: 271 LIEAKDLP-DDQTTTCNGLYCKFKLGNESHKSRQV-LKTKPAWCERFNIYLYEENNLEVS 444
+++AK+LP D T +C+ Y + KLGN +R K+ P W + ++ + ++ ++ S
Sbjct: 45 VVKAKELPGKDMTGSCDP-YVEVKLGNYKGTTRHFEKKSNPEWNQ---VFAFSKDRIQAS 100
Query: 445 -LWHKGKQKNF-----MGRCVIDLSRLEKK 516
L K K+F +GR V DL+ + K+
Sbjct: 101 FLEATVKDKDFVKDDLIGRVVFDLNEVPKR 130
>At1g51570.1 68414.m05804 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 776
Score = 34.3 bits (75), Expect = 0.064
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +1
Query: 271 LIEAKDLP-DDQTTTCNGLYCKFKLGNESHKSRQV-LKTKPAWCE--RFNIYLYEENNLE 438
+++AK+LP D T +C+ Y + KLGN +R K+ P W + F+ + + LE
Sbjct: 45 VVKAKELPGKDLTGSCDP-YVEVKLGNYRGTTRHFEKKSNPEWNQVFAFSKDRVQASYLE 103
Query: 439 VSLWHKGKQK-NFMGRCVIDLSRLEKK 516
++ K K + +GR V DL+ + K+
Sbjct: 104 ATVKDKDLVKDDLIGRVVFDLNEIPKR 130
>At4g11610.1 68417.m01859 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1011
Score = 33.9 bits (74), Expect = 0.085
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Frame = +1
Query: 211 VEKQKI*RTEEAYEILVNIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSR--QVLKTK 384
V + K+ + + VN+ IEA+DL T +Y K +LGN+ K+R Q
Sbjct: 430 VLRSKVYHAPRLWYVRVNV--IEAQDLIPTDKTRFPDVYVKAQLGNQVMKTRPCQARTLG 487
Query: 385 PAWCERFNIYLYE--ENNLEVSLWHK---GKQKNFMGRCVIDLSRLEKK 516
W E F + E E++L +++ + GK + +GR I L+ +EK+
Sbjct: 488 AVWNEDFLFVVAEPFEDHLVLTVEDRVAPGKDE-IVGRTYIPLNTVEKR 535
>At3g13750.1 68416.m01735 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
SP:P48980 from [Lycopersicon esculentum]
Length = 847
Score = 33.9 bits (74), Expect = 0.085
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 268 VLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERF 405
V+ + D PD CNG YC + N+++K + + W +F
Sbjct: 223 VMCKQDDAPDPIINACNGFYCDYFSPNKAYKPKMWTEAWTGWFTKF 268
>At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM
domain-containing protein contains Pfam profiles PF00168:
C2 domain; contains PF02893: GRAM domain; similar to
Chain A, Crystal Structure Of Synaptotagmin Iii C2aC2B
Length(GI:6980525); similar to Synaptotagmin III (SytIII)
(Swiss-Prot:P40748) [Rattus norvegicus]
Length = 1859
Score = 33.9 bits (74), Expect = 0.085
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Frame = +1
Query: 250 EILVNIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKT-KPAWCERFNIYLYEE 426
E+ + + ++EA++LP + Y + +LG + +++ V K P W E F+ + +
Sbjct: 826 EMKLQVRVVEARNLPAMDLNGFSDPYVRLQLGKQRSRTKVVKKNLNPKWTEDFSFGVDDL 885
Query: 427 NN-LEVSLWHKGKQKN--FMGRCVIDLSRLEKKRLTIFGRNW 543
N+ L VS+ + K N F+G+ + +S + G W
Sbjct: 886 NDELVVSVLDEDKYFNDDFVGQVRVSVSLVFDAENQSLGTVW 927
>At1g45130.1 68414.m05173 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase [Lycopersicon
esculentum] GI:7939619, beta-galactosidase BG1
GI:15081596 from [Vitis vinifera]; contains Pfam profile
PF01301: Glycosyl hydrolases family 35
Length = 732
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 268 VLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERF 405
V+ + D PD TCNG YC + N+ +K + W F
Sbjct: 220 VMCKEDDAPDPIINTCNGFYCDYFTPNKPYKPTMWTEAWSGWFTEF 265
>At5g12970.1 68418.m01487 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 769
Score = 32.7 bits (71), Expect = 0.20
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +1
Query: 259 VNIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSR--QVLKTKPAWCERFNIYLYE--E 426
V + +IEA+DL T +Y K LGN++ ++R Q P W E + E E
Sbjct: 203 VRVNVIEAQDLIPHDKTKFPEVYVKAMLGNQTLRTRISQTKTLNPMWNEDLMFVVAEPFE 262
Query: 427 NNLEVSLWHK--GKQKNFMGRCVIDLSRLEKK 516
L +++ + + +GRC I L ++++
Sbjct: 263 EALILAVEDRVAPNKDETLGRCAIPLQNVQRR 294
Score = 29.9 bits (64), Expect = 1.4
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +1
Query: 238 EEAYEILVNIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLK-TKPAWCE--RFN 408
E+ + + V +V +AK+LP T Y + KLGN ++ K + P W + F+
Sbjct: 37 EQMHYLYVRVV--KAKELPGKDVTGSCDPYVEVKLGNYRGMTKHFEKRSNPEWKQVFAFS 94
Query: 409 IYLYEENNLEVSLWHKG-KQKNFMGRCVIDLSRLEKK 516
+ + LEV + K + +GR + DL+ + K+
Sbjct: 95 KERIQASILEVVVKDKDVVLDDLIGRIMFDLNEIPKR 131
>At1g22610.1 68414.m02823 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1029
Score = 32.3 bits (70), Expect = 0.26
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Frame = +1
Query: 238 EEAYEILVNIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLK-TKPAWCE--RFN 408
E+ + + V++V +A+DLP + Y + KLGN ++ + K + P W + F+
Sbjct: 291 EQMHYLYVSVV--KARDLPVMDVSGSLDPYVEVKLGNYKGLTKHLEKNSNPIWKQIFAFS 348
Query: 409 IYLYEENNLEVSLWHKG--KQKNFMGRCVIDLSRL 507
+ N LEV++ K + +F+GR IDL+ +
Sbjct: 349 KERLQSNLLEVTVKDKDLLTKDDFVGRVHIDLTEV 383
>At3g45800.1 68416.m04957 hypothetical protein
Length = 563
Score = 31.9 bits (69), Expect = 0.34
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 189 P*SRSNESPLPIRSMMSADTTSVFGTIGSIPKPSGIGNDLKNNTNFTYNHYVC 31
P RS SP + ++ DT + T+ +P P+G N L N T NH C
Sbjct: 216 PSDRSEMSPSSLATLALDDTPGL--TVNQLPIPNGQQNHLHQNQWSTPNHQAC 266
>At2g28470.1 68415.m03460 beta-galactosidase, putative / lactase,
putative similar to Beta-galactosidase precursor
SP:P48980 from [Lycopersicon esculentum]
Length = 852
Score = 31.1 bits (67), Expect = 0.60
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 271 LIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAW 393
+ + D PD TCNG YC N ++K + + W
Sbjct: 222 MCQQTDAPDPMINTCNGFYCDQFTPNSNNKPKMWTENWSGW 262
>At4g36360.2 68417.m05164 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
SP:P48980 from [Lycopersicon esculentum]
Length = 855
Score = 30.7 bits (66), Expect = 0.79
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +1
Query: 244 AYEILVNIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERF 405
A E V V+ + D PD TCNG YC N+ +K + W F
Sbjct: 214 ATETGVPWVMCKEDDAPDPVINTCNGFYCDSFAPNKPYKPLIWTEAWSGWFTEF 267
>At4g36360.1 68417.m05163 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
SP:P48980 from [Lycopersicon esculentum]
Length = 856
Score = 30.7 bits (66), Expect = 0.79
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +1
Query: 244 AYEILVNIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERF 405
A E V V+ + D PD TCNG YC N+ +K + W F
Sbjct: 214 ATETGVPWVMCKEDDAPDPVINTCNGFYCDSFAPNKPYKPLIWTEAWSGWFTEF 267
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 30.7 bits (66), Expect = 0.79
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 LVNIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKT-KPAWCERFNIYLYEENN 432
L+ +VL+EA+DL + Y + + G + +++ + KT +P W + + + ++
Sbjct: 606 LIELVLVEARDLVAADIRGTSDPYVRVQYGEKKQRTKVIYKTLQPKWNQTME-FPDDGSS 664
Query: 433 LEVSL--WHKGKQKNFMGRCVIDLSRLE 510
LE+ + ++ + +G CV++ L+
Sbjct: 665 LELHVKDYNTLLPTSSIGNCVVEYQGLK 692
>At4g26140.2 68417.m03763 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
GI:3869280 from [Carica papaya]
Length = 636
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 268 VLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERF 405
++ + D P+ TCNG YC+ N +K + + W F
Sbjct: 218 IMCKQDDAPNSIINTCNGFYCENFKPNSDNKPKMWTENWTGWFTEF 263
>At4g26140.1 68417.m03762 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
GI:3869280 from [Carica papaya]
Length = 728
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 268 VLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERF 405
++ + D P+ TCNG YC+ N +K + + W F
Sbjct: 218 IMCKQDDAPNSIINTCNGFYCENFKPNSDNKPKMWTENWTGWFTEF 263
>At2g22125.1 68415.m02628 C2 domain-containing protein contains Pfam
profile PF00168: C2 domain
Length = 309
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Frame = +1
Query: 322 LYCKFKLGNESHKSRQVLKT--KPAWCERFNIYLYEE----NNLEVSLWHKGKQ-KNFMG 480
++CK LGN + +V+ T P W E F+ + +E L +S +K K K+ G
Sbjct: 210 VFCKITLGNNPPRQTKVISTGPNPEWDESFS-WSFESPPKGQKLHISCKNKSKMGKSSFG 268
Query: 481 RCVIDLSRL 507
+ I + R+
Sbjct: 269 KVTIQIDRV 277
>At1g05500.1 68414.m00561 C2 domain-containing protein similar to
Ca2+-dependent lipid-binding protein (CLB1) GI:2789434
from [Lycopersicon esculentum]
Length = 528
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/90 (20%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +1
Query: 256 LVNIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVL---KTKPAWCERFNIYLYE- 423
++++ +I A+++P Y + KS+ + P W + F+ + +
Sbjct: 404 VLSVTVISAEEIPIQDLMGKADPYVVLSMKKSGAKSKTRVVNDSLNPVWNQTFDFVVEDG 463
Query: 424 -ENNLEVSLW-HKGKQKNFMGRCVIDLSRL 507
+ L + +W H K+++GRC++ L+R+
Sbjct: 464 LHDMLVLEVWDHDTFGKDYIGRCILTLTRV 493
>At5g63810.1 68418.m08008 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939621 from
[Lycopersicon esculentum]; contains Pfam profile
PF01301: Glycosyl hydrolases family 35
Length = 741
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +1
Query: 286 DLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERF 405
D P +TCNG YC N K + + P W + F
Sbjct: 227 DAPPTVISTCNGFYCDQFTPNTPDKPKIWTENWPGWFKTF 266
>At3g20890.1 68416.m02641 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative similar to SP|P52597
Heterogeneous nuclear ribonucleoprotein F (hnRNP F)
{Homo sapiens}; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 350
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 480 KMRH*PFSTRKEKTHDIWQELECGYGFIHMLITVNG 587
++R PFS KE D +++ E F+H +TVNG
Sbjct: 265 RLRGLPFSAGKEDILDFFKDFELSEDFVH--VTVNG 298
>At4g23150.1 68417.m03341 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 659
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 223 SVFPHVLLYFFSVISEQRKSASDP 152
S+FP + L+ FS ++ R SA DP
Sbjct: 3 SLFPFIFLFLFSFLTSFRASAQDP 26
>At5g63800.1 68418.m08007 glycosyl hydrolase family 35 protein
similar to beta-galactosidase GI:7939621 from
[Lycopersicon esculentum]; contains Pfam profile
PF01301: Glycosyl hydrolases family 35
Length = 718
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 268 VLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERFNIY 414
++ ++ D PD TCNG+ C + ++ + T+ W F +Y
Sbjct: 221 IMCKSPDAPDPVINTCNGMKCGETFPGPNSPNKPKMWTED-WTSFFQVY 268
>At4g35010.1 68417.m04965 glycosyl hydrolase family 35 protein
similar to beta-galactosidase BG1 GI:15081596 from
[Vitis vinifera]
Length = 845
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 268 VLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERFNIY 414
V+ + D PD CNG +C + +++ L T+ W +F ++
Sbjct: 230 VMCKQNDAPDPMINACNGRHCGDTFPGPNRENKPSLWTE-NWTTQFRVF 277
>At4g02280.1 68417.m00309 sucrose synthase, putative / sucrose-UDP
glucosyltransferase, putative strong similarity to
sucrose synthase GI:6682841 from [Citrus unshiu]
Length = 809
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 268 VLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPA----WCERFNIYLYEEN 429
+LI + +PD + TTCN + +H R +++ W RF+++ Y EN
Sbjct: 334 ILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRKWISRFDVWPYLEN 391
>At1g70520.1 68414.m08116 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 649
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 392 GVRDSIYICTRKTI*RYPCGIKENRK--TLWEDASLTF 499
GV S+YIC R+TI R G K+ K +D+SL F
Sbjct: 276 GVAVSVYICKRRTIKRKRRGSKDVEKMAKTLKDSSLNF 313
>At1g30720.1 68414.m03755 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 527
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +2
Query: 2 FKEIKLRKTGQT**LYVKLVLFFRSFPI--PDGFGMDPMVPNTLVV--SADIMDRIGSGL 169
F E+KL+KT T ++ VLF+ +P+ P ++P+V L + +D + R+ S
Sbjct: 325 FPELKLKKTDCTEMRWIDSVLFWDDYPVGTPTSVLLNPLVAKKLFMKRKSDYVKRLISRT 384
Query: 170 SL 175
L
Sbjct: 385 DL 386
>At1g21570.1 68414.m02697 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 470
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 74 SFPIPDGFGMD-PMVPNTLVVSADIMDRIGSGLSLLRDHGKKVQ 202
S P +G G+ P +P LV+ + R G+G L+RD K+ +
Sbjct: 178 SGPSENGKGVKRPFIPKRLVIGNEEYVRFGNGNQLVRDPKKRTR 221
>At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
GI:3869280 from [Carica papaya]
Length = 724
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 268 VLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERF 405
++ + +D P TCNG YC+ N +K + + W F
Sbjct: 218 IMCKQEDAPGPIIDTCNGYYCEDFKPNSINKPKMWTENWTGWYTDF 263
>At3g52840.1 68416.m05823 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
GI:3869280 from [Carica papaya]
Length = 727
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 268 VLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERF 405
++ + +D P TCNG YC+ N +K + + W F
Sbjct: 218 IMSKQEDAPYPIIDTCNGFYCEGFKPNSDNKPKLWTENWTGWFTEF 263
>At5g60600.2 68418.m07603 1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase, putative / GcpE family protein
similar to GcpE [Plasmodium falciparum] GI:13094969;
contains Pfam profile PF04551: GcpE protein; supporting
cDNA gi|27462471|gb|AF434673.1
Length = 740
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -2
Query: 174 NESPLPIRSMMSADTTSVFGTIGSIPKPSGIGNDL 70
+E P+ I++M ++DT + GT+ + + + G D+
Sbjct: 99 SEHPIRIQTMTTSDTKDITGTVDEVMRIADKGADI 133
>At5g60600.1 68418.m07602 1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase, putative / GcpE family protein
similar to GcpE [Plasmodium falciparum] GI:13094969;
contains Pfam profile PF04551: GcpE protein; supporting
cDNA gi|27462471|gb|AF434673.1
Length = 741
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -2
Query: 174 NESPLPIRSMMSADTTSVFGTIGSIPKPSGIGNDL 70
+E P+ I++M ++DT + GT+ + + + G D+
Sbjct: 99 SEHPIRIQTMTTSDTKDITGTVDEVMRIADKGADI 133
>At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP
glucosyltransferase (SUS2) nearly identical to SP|Q00917
Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP
glucosyltransferase) {Arabidopsis thaliana} (SUS2);
contains Pfam profile: PF00862 sucrose synthase
Length = 807
Score = 27.1 bits (57), Expect = 9.7
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +1
Query: 211 VEKQKI*RTEEAYEILVNIVLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPA 390
+E + + R ++ ++ +LI + LP+ + TTCN + +H R +T+
Sbjct: 312 LENEMLLRIQKQGLEVIPKILIVTRLLPEAKGTTCNQRLERVSGTEHAHILRIPFRTEKG 371
Query: 391 ----WCERFNIYLYEENNLE 438
W RF+++ Y E E
Sbjct: 372 ILRKWISRFDVWPYLETFAE 391
>At5g15510.1 68418.m01816 expressed protein
Length = 497
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 112 GTEHAGGISRHHGPDRKRTFVAPRSRKKSTKVRVEKQKI*RTEE 243
G+ +AG SR + + T + RS+KK KV K RTE+
Sbjct: 286 GSSNAGRRSRRNSMESSTTMGSRRSKKKQVKVTSLKPFKLRTEQ 329
>At3g55430.1 68416.m06156 glycosyl hydrolase family 17 protein /
beta-1,3-glucanase, putative similar to beta-1,3
glucanase GI:7414433 from [Pisum sativum]; contains Pfam
profile PF00332: Glycosyl hydrolases family 17
Length = 449
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = -2
Query: 162 LPIRSMMSADTTSVFGTIGSIPKPSGIGNDLKNNTN 55
L I +++SA + +GT+G++P P+ + N +K T+
Sbjct: 20 LTIPAVISAIGVN-YGTLGNLPPPTQVANFIKTQTS 54
>At2g16730.1 68415.m01919 glycosyl hydrolase family 35 protein
similar to beta-galactosidase BG1 GI:15081596 from
[Vitis vinifera]
Length = 848
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +1
Query: 268 VLIEAKDLPDDQTTTCNGLYCKFKLGNESHKSRQVLKTKPAWCERFNIY 414
V+ + D PD CNG +C + ++ L T+ W +F ++
Sbjct: 233 VMCKQNDAPDPMINACNGRHCGDTFPGPNKDNKPSLWTE-NWTTQFRVF 280
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,106,103
Number of Sequences: 28952
Number of extensions: 267877
Number of successful extensions: 845
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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