Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00116
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   3.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.4  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.8  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
 Frame = +1

Query: 16  DVRIIDHE-KSTCVF---NFYWSSIIYEFNA-PKVLKRS*PLMPKRNFVYNHHAKNVIYS 180
           D+ I +HE K   +F   NF  + + +EF+    V  R    M   N V+N   KN+   
Sbjct: 231 DIFITEHESKPNWLFFLANFLTNLLFWEFDQIVNVAYR----METWNVVFNGSRKNLDVM 286

Query: 181 KSFFSF 198
           KSF +F
Sbjct: 287 KSFVNF 292


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = -1

Query: 338 LHVENFFLKNKLE-SSWLRRQIT 273
           L ++N +LK+KLE SS ++  IT
Sbjct: 262 LEIDNLYLKHKLEISSLVQTAIT 284


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 398 WSVL*QPSMFSNGQMDRYIFLHVENF 321
           W V  Q     +GQ+ +Y  L  ENF
Sbjct: 254 WGVKDQAEFTLSGQVMKYAALATENF 279


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 679 NPSSRTRLYNFNKY 638
           NP +  +LYNFN +
Sbjct: 347 NPVTNGKLYNFNTF 360


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 524 ILKKYLKIYGQHINMKNKQN 465
           + ++ +KI+ Q+  MKNK+N
Sbjct: 282 LTERQVKIWFQNRRMKNKKN 301


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 274 HGIATKVVCWIA 239
           HG   KV+C++A
Sbjct: 20  HGATDKVICYVA 31


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 547 ASIKNHPILFIVVYEL*VAP*NLR 618
           A +K+H    IV YEL V   NLR
Sbjct: 562 ALVKSHIAGAIVTYELVVIQFNLR 585


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,673
Number of Sequences: 336
Number of extensions: 4095
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)