Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00116
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023822-1|AAZ86743.1|  119|Drosophila melanogaster RH46383p pro...    30   2.7  
AE014298-2183|AAN09358.1|  119|Drosophila melanogaster CG32586-P...    30   2.7  
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l...    29   8.2  
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot...    29   8.2  
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p...    29   8.2  
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,...    29   8.2  
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,...    29   8.2  
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,...    29   8.2  

>BT023822-1|AAZ86743.1|  119|Drosophila melanogaster RH46383p
           protein.
          Length = 119

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 545 MRQSKIIQSYLLWFMNFK*LHRIYVKLYIYFVFI 646
           MR  +I  +Y L  +N +  HR+ +  ++YFVF+
Sbjct: 48  MRSYRIYFAYALGQINLRQTHRLILPFFVYFVFL 81


>AE014298-2183|AAN09358.1|  119|Drosophila melanogaster CG32586-PA
           protein.
          Length = 119

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +2

Query: 545 MRQSKIIQSYLLWFMNFK*LHRIYVKLYIYFVFI 646
           MR  +I  +Y L  +N +  HR+ +  ++YFVF+
Sbjct: 48  MRSYRIYFAYALGQINLRQTHRLILPFFVYFVFL 81


>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
            isoform protein.
          Length = 5554

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 500  YGQHINMKNKQNISLYINRILLNNEKPAYKHSS 402
            Y + I M+N QNIS++ +   LN+ + + +H S
Sbjct: 2171 YVKRIRMENSQNISVHSSNQRLNDRRDSKEHKS 2203


>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
            protein long isoformprotein.
          Length = 5533

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 500  YGQHINMKNKQNISLYINRILLNNEKPAYKHSS 402
            Y + I M+N QNIS++ +   LN+ + + +H S
Sbjct: 2177 YVKRIRMENSQNISVHSSNQRLNDRRDSKEHKS 2209


>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
            protein.
          Length = 5476

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 500  YGQHINMKNKQNISLYINRILLNNEKPAYKHSS 402
            Y + I M+N QNIS++ +   LN+ + + +H S
Sbjct: 2120 YVKRIRMENSQNISVHSSNQRLNDRRDSKEHKS 2152


>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
            isoform C protein.
          Length = 5476

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 500  YGQHINMKNKQNISLYINRILLNNEKPAYKHSS 402
            Y + I M+N QNIS++ +   LN+ + + +H S
Sbjct: 2120 YVKRIRMENSQNISVHSSNQRLNDRRDSKEHKS 2152


>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
            isoform B protein.
          Length = 5533

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 500  YGQHINMKNKQNISLYINRILLNNEKPAYKHSS 402
            Y + I M+N QNIS++ +   LN+ + + +H S
Sbjct: 2177 YVKRIRMENSQNISVHSSNQRLNDRRDSKEHKS 2209


>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
            isoform A protein.
          Length = 5560

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 500  YGQHINMKNKQNISLYINRILLNNEKPAYKHSS 402
            Y + I M+N QNIS++ +   LN+ + + +H S
Sbjct: 2177 YVKRIRMENSQNISVHSSNQRLNDRRDSKEHKS 2209


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,843,230
Number of Sequences: 53049
Number of extensions: 574235
Number of successful extensions: 1118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)