Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00115
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X96484-1|CAA65339.1| 84|Homo sapiens DGCR6 protein. 50 6e-06
CR542133-1|CAG46930.1| 84|Homo sapiens DGCR6 protein. 50 6e-06
CR456434-1|CAG30320.1| 220|Homo sapiens DGCR6 protein. 50 6e-06
CR456361-1|CAG30247.1| 220|Homo sapiens Em:AC007663.3 protein. 50 6e-06
BC047039-1|AAH47039.1| 220|Homo sapiens DiGeorge syndrome criti... 50 6e-06
BC000682-1|AAH00682.1| 220|Homo sapiens DiGeorge syndrome criti... 50 6e-06
AF228708-1|AAK15585.1| 220|Homo sapiens DiGeorge syndrome criti... 50 6e-06
AF228707-1|AAK15584.1| 220|Homo sapiens DiGeorge syndrome criti... 50 6e-06
BC151245-1|AAI51246.1| 1486|Homo sapiens cut-like 2 (Drosophila)... 32 1.7
AB006631-1|BAA22962.2| 1505|Homo sapiens KIAA0293 protein. 32 1.7
U78971-1|AAB47504.1| 404|Homo sapiens Sam68deltaKH protein. 29 9.2
M88108-1|AAA59990.1| 443|Homo sapiens p62 protein. 29 9.2
BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, R... 29 9.2
BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein. 29 9.2
BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, R... 29 9.2
AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, R... 29 9.2
AL445248-1|CAH71944.1| 404|Homo sapiens KH domain containing, R... 29 9.2
AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, R... 29 9.2
AL139249-1|CAI21971.1| 404|Homo sapiens KH domain containing, R... 29 9.2
>X96484-1|CAA65339.1| 84|Homo sapiens DGCR6 protein.
Length = 84
Score = 50.0 bits (114), Expect = 6e-06
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +2
Query: 92 QVSDQQVTLEKAGVPGFFVTNKPIEIKVQMYLLDFILRLSK 214
+V+DQQ TLEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 12 KVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 52
>CR542133-1|CAG46930.1| 84|Homo sapiens DGCR6 protein.
Length = 84
Score = 50.0 bits (114), Expect = 6e-06
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +2
Query: 92 QVSDQQVTLEKAGVPGFFVTNKPIEIKVQMYLLDFILRLSK 214
+V+DQQ TLEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 12 KVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 52
>CR456434-1|CAG30320.1| 220|Homo sapiens DGCR6 protein.
Length = 220
Score = 50.0 bits (114), Expect = 6e-06
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +2
Query: 92 QVSDQQVTLEKAGVPGFFVTNKPIEIKVQMYLLDFILRLSK 214
+V+DQQ TLEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 148 KVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>CR456361-1|CAG30247.1| 220|Homo sapiens Em:AC007663.3 protein.
Length = 220
Score = 50.0 bits (114), Expect = 6e-06
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +2
Query: 92 QVSDQQVTLEKAGVPGFFVTNKPIEIKVQMYLLDFILRLSK 214
+V+DQQ TLEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 148 KVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>BC047039-1|AAH47039.1| 220|Homo sapiens DiGeorge syndrome critical
region gene 6 protein.
Length = 220
Score = 50.0 bits (114), Expect = 6e-06
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +2
Query: 92 QVSDQQVTLEKAGVPGFFVTNKPIEIKVQMYLLDFILRLSK 214
+V+DQQ TLEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 148 KVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>BC000682-1|AAH00682.1| 220|Homo sapiens DiGeorge syndrome critical
region gene 6-like protein.
Length = 220
Score = 50.0 bits (114), Expect = 6e-06
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +2
Query: 92 QVSDQQVTLEKAGVPGFFVTNKPIEIKVQMYLLDFILRLSK 214
+V+DQQ TLEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 148 KVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>AF228708-1|AAK15585.1| 220|Homo sapiens DiGeorge syndrome critical
region 6-like protein protein.
Length = 220
Score = 50.0 bits (114), Expect = 6e-06
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +2
Query: 92 QVSDQQVTLEKAGVPGFFVTNKPIEIKVQMYLLDFILRLSK 214
+V+DQQ TLEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 148 KVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>AF228707-1|AAK15584.1| 220|Homo sapiens DiGeorge syndrome critical
region 6 protein protein.
Length = 220
Score = 50.0 bits (114), Expect = 6e-06
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +2
Query: 92 QVSDQQVTLEKAGVPGFFVTNKPIEIKVQMYLLDFILRLSK 214
+V+DQQ TLEKAGV GF+VT P E+ +QM LL+ I +L +
Sbjct: 148 KVADQQSTLEKAGVAGFYVTTNPQELMLQMNLLELIRKLQQ 188
>BC151245-1|AAI51246.1| 1486|Homo sapiens cut-like 2 (Drosophila)
protein.
Length = 1486
Score = 31.9 bits (69), Expect = 1.7
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 402 GSTPTCPALHPQ*RAEV-RRFPPD 334
GSTP CP+LHPQ +E R PD
Sbjct: 1353 GSTPDCPSLHPQQESEAGERLHPD 1376
>AB006631-1|BAA22962.2| 1505|Homo sapiens KIAA0293 protein.
Length = 1505
Score = 31.9 bits (69), Expect = 1.7
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 402 GSTPTCPALHPQ*RAEV-RRFPPD 334
GSTP CP+LHPQ +E R PD
Sbjct: 1372 GSTPDCPSLHPQQESEAGERLHPD 1395
>U78971-1|AAB47504.1| 404|Homo sapiens Sam68deltaKH protein.
Length = 404
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 375 GGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHP----PPRDAGP 542
G G + + P V Q P+ +P + S +G GG + R+ + P PP GP
Sbjct: 16 GRSGSMDPSGAHPSVRQTPSRQPPLPHRS-RGGGGGSRGGARASPATQPPPLLPPSATGP 74
Query: 543 -AIVGATTTSPL 575
A VG +PL
Sbjct: 75 DATVGGPAPTPL 86
>M88108-1|AAA59990.1| 443|Homo sapiens p62 protein.
Length = 443
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 375 GGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHP----PPRDAGP 542
G G + + P V Q P+ +P + S +G GG + R+ + P PP GP
Sbjct: 16 GRSGSMDPSGAHPSVRQTPSRQPPLPHRS-RGGGGGSRGGARASPATQPPPLLPPSATGP 74
Query: 543 -AIVGATTTSPL 575
A VG +PL
Sbjct: 75 DATVGGPAPTPL 86
>BC019109-1|AAH19109.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 375 GGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHP----PPRDAGP 542
G G + + P V Q P+ +P + S +G GG + R+ + P PP GP
Sbjct: 16 GRSGSMDPSGAHPSVRQTPSRQPPLPHRS-RGGGGGSRGGARASPATQPPPLLPPSATGP 74
Query: 543 -AIVGATTTSPL 575
A VG +PL
Sbjct: 75 DATVGGPAPTPL 86
>BC010132-1|AAH10132.1| 381|Homo sapiens KHDRBS1 protein protein.
Length = 381
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 375 GGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHP----PPRDAGP 542
G G + + P V Q P+ +P + S +G GG + R+ + P PP GP
Sbjct: 16 GRSGSMDPSGAHPSVRQTPSRQPPLPHRS-RGGGGGSRGGARASPATQPPPLLPPSATGP 74
Query: 543 -AIVGATTTSPL 575
A VG +PL
Sbjct: 75 DATVGGPAPTPL 86
>BC000717-1|AAH00717.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 375 GGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHP----PPRDAGP 542
G G + + P V Q P+ +P + S +G GG + R+ + P PP GP
Sbjct: 16 GRSGSMDPSGAHPSVRQTPSRQPPLPHRS-RGGGGGSRGGARASPATQPPPLLPPSATGP 74
Query: 543 -AIVGATTTSPL 575
A VG +PL
Sbjct: 75 DATVGGPAPTPL 86
>AL445248-2|CAH71945.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 375 GGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHP----PPRDAGP 542
G G + + P V Q P+ +P + S +G GG + R+ + P PP GP
Sbjct: 16 GRSGSMDPSGAHPSVRQTPSRQPPLPHRS-RGGGGGSRGGARASPATQPPPLLPPSATGP 74
Query: 543 -AIVGATTTSPL 575
A VG +PL
Sbjct: 75 DATVGGPAPTPL 86
>AL445248-1|CAH71944.1| 404|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 404
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 375 GGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHP----PPRDAGP 542
G G + + P V Q P+ +P + S +G GG + R+ + P PP GP
Sbjct: 16 GRSGSMDPSGAHPSVRQTPSRQPPLPHRS-RGGGGGSRGGARASPATQPPPLLPPSATGP 74
Query: 543 -AIVGATTTSPL 575
A VG +PL
Sbjct: 75 DATVGGPAPTPL 86
>AL139249-2|CAI21972.1| 443|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 443
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 375 GGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHP----PPRDAGP 542
G G + + P V Q P+ +P + S +G GG + R+ + P PP GP
Sbjct: 16 GRSGSMDPSGAHPSVRQTPSRQPPLPHRS-RGGGGGSRGGARASPATQPPPLLPPSATGP 74
Query: 543 -AIVGATTTSPL 575
A VG +PL
Sbjct: 75 DATVGGPAPTPL 86
>AL139249-1|CAI21971.1| 404|Homo sapiens KH domain containing, RNA
binding, signal transduction associated 1 protein.
Length = 404
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +3
Query: 375 GGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHP----PPRDAGP 542
G G + + P V Q P+ +P + S +G GG + R+ + P PP GP
Sbjct: 16 GRSGSMDPSGAHPSVRQTPSRQPPLPHRS-RGGGGGSRGGARASPATQPPPLLPPSATGP 74
Query: 543 -AIVGATTTSPL 575
A VG +PL
Sbjct: 75 DATVGGPAPTPL 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,544,557
Number of Sequences: 237096
Number of extensions: 1913751
Number of successful extensions: 4884
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4882
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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