Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00115
(589 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31280.1 68414.m03828 PAZ domain-containing protein / piwi do... 30 1.00
At2g22890.1 68415.m02717 expressed protein ; expression support... 29 2.3
At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to... 28 4.0
At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family pr... 28 4.0
At2g48160.1 68415.m06031 PWWP domain-containing protein 28 5.3
At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH) domain... 27 7.0
At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH) domain... 27 7.0
At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH) domain... 27 7.0
At5g10660.1 68418.m01234 calmodulin-binding protein-related cont... 27 9.3
At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative ... 27 9.3
At3g14440.1 68416.m01830 9-cis-epoxycarotenoid dioxygenase, puta... 27 9.3
>At1g31280.1 68414.m03828 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|O04379 Argonaute
protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD
protein (ZWILLE protein) {Arabidopsis thaliana};
contains Pfam profiles PF02171: Piwi domain, PF02170:
PAZ domain
Length = 1013
Score = 30.3 bits (65), Expect = 1.00
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 351 GLPPFTGDGGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQ 482
G PP G GGRG ++ + +P V+ QP+ P S G G+
Sbjct: 71 GPPP--GHGGRGTTQFQQPRPQVAPQPSQAPASYAGSVGGVAGR 112
>At2g22890.1 68415.m02717 expressed protein ; expression supported
by MPSS
Length = 279
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 401 PTKTSCLSTTNVQTSHETKLMKRQRGASEAFSAEPFL 511
P+ STTN Q +HE KL+ QR + S +P L
Sbjct: 24 PSFLRVTSTTNSQPNHEMKLVVEQRLVNPPLSNDPTL 60
>At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to
homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis
thaliana]
Length = 723
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 468 GKGGQVKRLVRSHSSHHPPPRDAGPAIVGATTTSPLGR 581
G GG+ L SH DAGP+ V A +T P+GR
Sbjct: 122 GGGGERNVLFASHKRAQRSKEDAGPSSVVANST-PVGR 158
>At2g34040.1 68415.m04167 apoptosis inhibitory 5 (API5) family
protein contains Pfam domain PF05918 Apoptosis
inhibitory protein 5 (API5)
Length = 553
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +3
Query: 348 AGLPPFTGDGGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQV 485
A +PPF GD +S KP S T + NS G G V
Sbjct: 456 AKVPPFIGDTNLNLSWKEATKPLASTTTTIGGKRPANSNNGSGNNV 501
>At2g48160.1 68415.m06031 PWWP domain-containing protein
Length = 1366
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 336 QEEIAGLPPFTGDGGRGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSS 512
Q+E A P +G G +E+ L P V + PT+ + NS G L+ +S
Sbjct: 113 QQERASDPKSAEEGTLGSAENTTLMPQVIEIPTATSLTQMNSDPSHGRDESTLLNEDAS 171
>At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 369 GDGG--RGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHPPPRDAGP 542
G GG R SE N PP ++ S R S + GG+ ++ ++ PPP+ A P
Sbjct: 273 GRGGLQRKFSEQNIGAPPSYEEAVSDSRSPVYS-ERDGGETPQVTAPGAASPPPPQVAAP 331
Query: 543 AIVGATT 563
T
Sbjct: 332 EAASPPT 338
>At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 369 GDGG--RGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHPPPRDAGP 542
G GG R SE N PP ++ S R S + GG+ ++ ++ PPP+ A P
Sbjct: 273 GRGGLQRKFSEQNIGAPPSYEEAVSDSRSPVYS-ERDGGETPQVTAPGAASPPPPQVAAP 331
Query: 543 AIVGATT 563
T
Sbjct: 332 EAASPPT 338
>At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 369 GDGG--RGMSESNRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHPPPRDAGP 542
G GG R SE N PP ++ S R S + GG+ ++ ++ PPP+ A P
Sbjct: 273 GRGGLQRKFSEQNIGAPPSYEEAVSDSRSPVYS-ERDGGETPQVTAPGAASPPPPQVAAP 331
Query: 543 AIVGATT 563
T
Sbjct: 332 EAASPPT 338
>At5g10660.1 68418.m01234 calmodulin-binding protein-related
contains weak similarity to calmodulin-binding proteins
Length = 407
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 399 NRLKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHPPPRDAGPAIVGA 557
N LKP +S +P +R+N+ + ++L+R S HPP P+ A
Sbjct: 53 NYLKPTISSRPDPVKFLRKNN---AVEENQKLLRRRSFDHPPSSLTSPSTSSA 102
>At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative /
proton pump, putative similar to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2
type
Length = 961
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 174 TLISMGLFVTKNPGTPAFSSVTC 106
TL L VTKNPG +S TC
Sbjct: 183 TLTGESLPVTKNPGASVYSGSTC 205
>At3g14440.1 68416.m01830 9-cis-epoxycarotenoid dioxygenase,
putative / neoxanthin cleavage enzyme, putative /
carotenoid cleavage dioxygenase, putative similar to
9-cis-epoxycarotenoid dioxygenase GB:AAF26356
[GI:6715257][Phaseolus vulgaris]
Length = 599
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +3
Query: 405 LKPPVSQQPTSKPRMRQNS*KGKGGQVKRLVRSHSSHHPPPRDAGPAIVGATTTSPLGRQ 584
+KP + T + + Q + + + SH HP P+ A P++ A +P+ Q
Sbjct: 74 VKPKAKESNTKQMNLFQRAAAAALDAAEGFLVSHEKLHPLPKTADPSVQIAGNFAPVNEQ 133
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,289,244
Number of Sequences: 28952
Number of extensions: 252766
Number of successful extensions: 607
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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