Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00114
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    26   0.98 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    26   0.98 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    26   1.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   1.7  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   2.3  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   3.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   5.2  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   6.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   6.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.1  

>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 65  KNGKPPLSQTTTQMRTCCIRTPQH 136
           +NG PPL Q    M T  +  PQH
Sbjct: 140 ENGSPPLDQMGHHMGTAQMTIPQH 163


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 26.2 bits (55), Expect = 0.98
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = +2

Query: 227 TLAR*EASLKLQCKRTVCARQ*GPQ*GKANTQQDPRRVCGRQRHFQLHQGRQRQNCYHQ 403
           T  R +   +L     V  R  G   GK  +QQ P++    Q+  Q  Q RQ+Q   HQ
Sbjct: 226 TAVRGDVVPELTFSEVVRRRYRGKATGKPRSQQQPQQQQQPQQKQQQLQRRQQQQQQHQ 284


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = -1

Query: 407 RADGNSFDAVVPDVTGSVAVVHR---HDGDPVGYLLSLIVALTDER 279
           RAD N F    PDVT + +V+ R    D    G+ +  +  L+D R
Sbjct: 167 RADTNRFPPSRPDVTFASSVISRLDPRDDSARGWRVPDVATLSDHR 212


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 293 GPQ*GKANTQQDPRRVCGRQRHFQLH--QGRQRQNCYHQHGANH 418
           G + G++ +  DP R  G   H Q H  Q +Q+Q  +H H  +H
Sbjct: 125 GGRPGQSGSPPDPTR-NGIVLHHQAHQQQQQQQQQLHHHHHHHH 167


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +1

Query: 583 TQTE--FSTKRVFADASSINNHLYNLVTGGDYINAVK 687
           TQT+  F+  RV  +   INN     +T G+ + A+K
Sbjct: 418 TQTDDTFTCTRVIPEDCEINNGCMEEITSGEILYAIK 454


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 150 VPPCEDPDW*RAATPRRLL 206
           +P C   DW RA  PR ++
Sbjct: 79  IPECSVDDWPRAPNPREII 97


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 103  NEDLLYPYSPTPYFGMYHLVK-IPIGRGLL 189
            NE+ + P SP P     HLV+ + +G G L
Sbjct: 1049 NENYMVPPSPRPVSEELHLVRGVRLGSGTL 1078


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 347 RQRHFQLHQGRQRQNCYHQH 406
           RQ+H Q  Q +Q+Q   H+H
Sbjct: 899 RQQHQQQQQQQQQQQQQHEH 918


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 252 SSYNVNEQFALVSKGHNKGKQIPNRIP 332
           + Y  +EQF     G+ KG+Q  +  P
Sbjct: 647 TGYGFHEQFCQECTGYKKGEQCEDECP 673


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 222  HFSFSPVIDVV*QPSTNRDLHKVVHTE 142
            H S SP+  ++  P  NR   K  HTE
Sbjct: 1475 HQSASPIRHILNSPLLNRRQRKKQHTE 1501


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,970
Number of Sequences: 2352
Number of extensions: 14957
Number of successful extensions: 51
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)