Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00114
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 31 0.78
Z48585-1|CAA88486.1| 154|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 28 7.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 7.3
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 28 7.3
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 9.6
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +1
Query: 268 TNSLRSSVRATIRESKYPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPG 447
++S++ ++ S + SP ++ ++P ++G T+S + G S GA QTS
Sbjct: 1487 SSSIQPIASSSTMGSTAGSSSPQPTVSSTSVPSSTGATSSGSSTTV-GSSTVGATQTSVS 1545
Query: 448 SSTRPKT 468
SST P T
Sbjct: 1546 SSTVPNT 1552
>Z48585-1|CAA88486.1| 154|Caenorhabditis elegans Hypothetical
protein ZK673.1 protein.
Length = 154
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 346 TTATLPVTSGTTASKLLPSARGQSLSGALQTSPGSST 456
TTA T GTTA+ + G ++SGA + G++T
Sbjct: 27 TTAATTATGGTTATGGTTATGGTTVSGATTAASGATT 63
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 545 TMEPGTNCPQT*GPRRNSARRGSLPTQVQSTITCTTWLRAATTS 676
T+ P T P+T PR G T+V T+T T L + TS
Sbjct: 718 TLPPETVPPKTEAPRTEVPMTGPSRTEVPMTVTPETGLSSTVTS 761
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +1
Query: 268 TNSLRSSVRATIRESKYPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPG 447
T + ++ T + T +P+ TT T P T+ TTA + + T
Sbjct: 255 TTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTPTT 314
Query: 448 SSTRPKT 468
++T PKT
Sbjct: 315 TTTTPKT 321
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 271 NSLRSSVRATIRESKYPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGS 450
+SLRS+ + +P + S ATLP T+ + S++ S+ S S + +SP +
Sbjct: 1375 SSLRSTSNSH-HHHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSASNSGTSSPAA 1433
Query: 451 ST 456
++
Sbjct: 1434 TS 1435
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 268 TNSLRSSVRATIRESKYPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPG 447
T+ + S++ E+ TGS +T + +SG+TA+ + S S SG TSP
Sbjct: 1038 TSPVVSTISQGSTETPGSTGSTVTKPSTVSGSASSGSTAT--MGSTEASSTSGGSSTSPN 1095
Query: 448 --SSTRPKT 468
ST P T
Sbjct: 1096 PSQSTSPST 1104
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 271 NSLRSSVRATIRESKYPTGSPSCLWTTATLPVTSGTTASKLLPSARGQSLSGALQTSPGS 450
+SLRS+ + +P + S ATLP T+ + S++ S+ S S + +SP +
Sbjct: 1375 SSLRSTSNSH-HHHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSASNSGTSSPAA 1433
Query: 451 ST 456
++
Sbjct: 1434 TS 1435
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 9.6
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 250 PQATM*TNSLRSSVRATIRESKYPTG-SPSCLWTTATL-PVTS--GTTASKLLPSARGQS 417
P + T+S SS T S T SPS TT+T P TS G ++S PS+ S
Sbjct: 457 PVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASS 516
Query: 418 LSGALQTSPGSST 456
+ +S SST
Sbjct: 517 SVSSTASSTQSST 529
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 9.6
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 250 PQATM*TNSLRSSVRATIRESKYPTG-SPSCLWTTATL-PVTS--GTTASKLLPSARGQS 417
P + T+S SS T S T SPS TT+T P TS G ++S PS+ S
Sbjct: 457 PVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASS 516
Query: 418 LSGALQTSPGSST 456
+ +S SST
Sbjct: 517 SVSSTASSTQSST 529
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,203,942
Number of Sequences: 27780
Number of extensions: 319196
Number of successful extensions: 949
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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