Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00113
(652 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 79 2e-15
SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 78 5e-15
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 46 2e-05
SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 46 2e-05
SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15) 32 0.35
SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13) 31 0.81
SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08) 31 0.81
SB_5784| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 29 4.3
SB_6151| Best HMM Match : Extensin_2 (HMM E-Value=2.6) 28 5.7
SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11) 28 5.7
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6) 28 5.7
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06) 28 5.7
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12) 28 7.6
SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11) 28 7.6
SB_25447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24) 28 7.6
SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4) 28 7.6
SB_24839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_3| Best HMM Match : Peptidase_C21 (HMM E-Value=5) 28 7.6
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 79.4 bits (187), Expect = 2e-15
Identities = 39/84 (46%), Positives = 51/84 (60%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
ESYS+F+ LFD I+E YH +K DKH + T NLDP G F+ STR+R R+L+
Sbjct: 440 ESYSLFSPLFDKIVEHYHAPYKLADKHTSDMNPEKVTAPNLDPDGVFIRSTRIRVARNLK 499
Query: 436 GYPFNPCLTESQYKEMEDKVSGTL 507
GY P LT + E+E KV+ L
Sbjct: 500 GYALTPGLTRKERNEIEKKVTEVL 523
Score = 74.9 bits (176), Expect = 5e-14
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +2
Query: 32 KAATMVDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQS 208
K+ ++ A +EK + F + L + KSLLKKYLT E+F+SLK+KKT+ G +L DCI S
Sbjct: 337 KSLLEIERAAIEKQRSVFPEALNKEECKSLLKKYLTAEMFNSLKDKKTAKGISLYDCINS 396
Query: 209 GVENLDSGVGIYA 247
GV NLDS G+YA
Sbjct: 397 GVVNLDSSCGVYA 409
Score = 71.7 bits (168), Expect = 5e-13
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +3
Query: 510 SLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFW 650
SL G+L G +YPLTGM + T+Q+L+DDHFLFK+GDRFL+AA + W
Sbjct: 525 SLTGDLAGKYYPLTGMDEATRQKLVDDHFLFKKGDRFLEAAGVNKLW 571
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = +3
Query: 522 ELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFW 650
+L G +YPLTGM + T++QL++DHFLFK+GDRFL AA + W
Sbjct: 150 DLAGKYYPLTGMDEVTREQLVNDHFLFKKGDRFLDAAGCNKEW 192
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
ESY+VFA LFD +IEDYH+ +K D H D +LDP F+ STR+R GR L
Sbjct: 93 ESYTVFAPLFDKVIEDYHSPYKLKDGHTSDMNPDRVNAPDLDPDNRFIRSTRIRVGRDLA 152
Query: 436 G--YP 444
G YP
Sbjct: 153 GKYYP 157
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 44 MVDAATLEKLEAGFS-----KLQGSDSKSLLKKYLTREVFDSLKNKKTSFG 181
M DAA EK + + K + K LLKKYLT +VFD LK KKT G
Sbjct: 8 MADAAEAEKYRSKNAYPVPLKSAKCNPKCLLKKYLTNQVFDQLKTKKTKRG 58
>SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 78.6 bits (185), Expect = 4e-15
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
ESY+VFA LFD +IEDYH+ +K D H D +LDP F+ STR+R GR+L+
Sbjct: 232 ESYTVFAPLFDKVIEDYHSPYKLKDGHTSDMNPDRVNAPDLDPDNRFIRSTRIRVGRNLK 291
Query: 436 GYPFNPCLTESQYKEMEDKVSGT 504
GY P LT+ + E+E K S T
Sbjct: 292 GYGLAPSLTKKERVELEKKASFT 314
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +2
Query: 110 KSLLKKYLTREVFDSLKNKKTSFG 181
K LLKKYLT +VFD LK KKT G
Sbjct: 174 KCLLKKYLTNQVFDQLKTKKTKRG 197
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 78.2 bits (184), Expect = 5e-15
Identities = 39/70 (55%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 47 VDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 223
++ A +E+ F + L+ + KSLLKKYLT +VF+SLK KKTS G+ L DCI SGV NL
Sbjct: 614 IERAAIEEAHLKFPEDLKKPEVKSLLKKYLTEDVFNSLKEKKTSRGAGLYDCINSGVVNL 673
Query: 224 DSGVGIYAPD 253
DSG G+YA D
Sbjct: 674 DSGTGVYAAD 683
Score = 77.8 bits (183), Expect = 7e-15
Identities = 41/81 (50%), Positives = 50/81 (61%)
Frame = +2
Query: 11 DGCSSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTL 190
D + +K + AA K L+ + KSL+KKYLT E+F+ LK+KKT G TL
Sbjct: 171 DMYNGVKKLLEIEKAAVEAKRNVFPEVLKKPEVKSLMKKYLTEEMFNELKDKKTELGVTL 230
Query: 191 LDCIQSGVENLDSGVGIYAPD 253
DCI SGVENLDSG GIYA D
Sbjct: 231 SDCINSGVENLDSGTGIYAGD 251
Score = 74.1 bits (174), Expect = 9e-14
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
ESY +FA LFD IIEDYH +K KH + +LDP G F+ STR+R R+L+
Sbjct: 253 ESYKLFAPLFDKIIEDYHAPYKLEQKHTSDMNPEKVEAPDLDPEGSFIRSTRIRVARNLK 312
Query: 436 GYPFNPCLTESQYKEMEDKV 495
GY P L++ E+E+KV
Sbjct: 313 GYALTPALSKKARLEIEEKV 332
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/84 (44%), Positives = 47/84 (55%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
E Y VF ELFD IIEDYH +K + H + NLD G F+ STR+R R+L+
Sbjct: 685 ECYEVFGELFDKIIEDYHAPYKLEENHKSDMDPEKVDAPNLDAEGAFIRSTRIRVARNLK 744
Query: 436 GYPFNPCLTESQYKEMEDKVSGTL 507
GY P LT + ++E KV G L
Sbjct: 745 GYALTPGLTRKERVDVESKVVGVL 768
Score = 71.7 bits (168), Expect = 5e-13
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +3
Query: 510 SLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFW 650
SL G+L G +YPL+GM + T+QQL+DDHFLFK+GDRFL+AA + W
Sbjct: 770 SLTGDLAGKYYPLSGMDEATRQQLVDDHFLFKKGDRFLEAAGVNKMW 816
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 555 MSKETQQQLIDDHFLFKEGDRFLQAANACRFW 650
M + T+QQL+DDHFLFK+GDRFL+AA R W
Sbjct: 1 MDEATRQQLVDDHFLFKKGDRFLEAAGVNREW 32
Score = 50.8 bits (116), Expect = 9e-07
Identities = 20/33 (60%), Positives = 29/33 (87%)
Frame = +3
Query: 510 SLEGELKGTFYPLTGMSKETQQQLIDDHFLFKE 608
SL G+L G ++PL GM++ET+QQL++DHFLFK+
Sbjct: 338 SLTGDLAGKYHPLDGMTEETRQQLVNDHFLFKK 370
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 72.5 bits (170), Expect = 3e-13
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
ESY FAELFDP+IE+ H+GFKK+DKH G D ++V+S+RVR GRS+
Sbjct: 113 ESYDTFAELFDPVIEERHSGFKKSDKHKTDLDSSKIRGGKFDE--KYVLSSRVRTGRSIR 170
Query: 436 GYPFNPCLTESQYKEMEDKVSGTL 507
G+ P T ++ +E+E V+ L
Sbjct: 171 GFSLPPHCTRAERREVERIVNDAL 194
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/47 (55%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFW 650
L G+L G +YPL GMS QQQLIDDHFLF K L A R W
Sbjct: 197 LGGDLNGKYYPLNGMSDAQQQQLIDDHFLFDKPVSPLLTCAGMARDW 243
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +2
Query: 113 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPD 253
+L+ K+LT ++ L++K T G TL IQ+GV+N S VG+ A D
Sbjct: 61 NLMAKHLTPRLYVKLRDKSTPNGYTLDQAIQTGVDNPGHPFISTVGLVAGD 111
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 70.1 bits (164), Expect = 1e-12
Identities = 37/84 (44%), Positives = 50/84 (59%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
ESY VFA+LFDP+IE+ HNG+KKTDKH G+ D +V+STR R GRS+
Sbjct: 454 ESYDVFADLFDPVIEERHNGYKKTDKHVTDLNHRKLKGGSFDE--RYVLSTRCRTGRSIR 511
Query: 436 GYPFNPCLTESQYKEMEDKVSGTL 507
G+ P T ++ + +E V L
Sbjct: 512 GFSLPPHCTRAERRSVEKVVVDAL 535
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFW 650
L G+L GT+YPL M+ E Q+QLI+DHFLF K L A R W
Sbjct: 538 LGGDLSGTYYPLGKMTNEEQEQLINDHFLFDKPVSPLLTCAGMARDW 584
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +2
Query: 119 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPD 253
+ ++L+ ++ LK+K T G TL IQ+GV+N S VG+ A D
Sbjct: 404 MARHLSPRLYTKLKDKVTPNGYTLDMAIQTGVDNPGHPFISTVGLVAGD 452
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
ESY VFA++FDP+IE HNG+KKT KH + + +G D ++V+S RVR GRS+
Sbjct: 420 ESYDVFADMFDPVIEKRHNGYKKTAKH-KTDLNPSNLIGGDDLDEKYVLSCRVRTGRSIR 478
Query: 436 GYPFNPCLTESQYKEMEDKVSGTL 507
G P + ++ +E+E V+ L
Sbjct: 479 GLCLPPWCSRAERREVEKIVTSAL 502
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
ESY VFA++FDP+IE H+G++KTD H D +G D ++V+S RVR GRS+
Sbjct: 51 ESYDVFADMFDPVIEKRHDGYRKTDMHKTDLNPD-HLIGGDDLDEKYVLSCRVRTGRSIR 109
Query: 436 GYPFNPCLTESQYKEMEDKVS 498
G P T ++ +E+E KVS
Sbjct: 110 GLGLPPHCTRAERREVE-KVS 129
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
E+Y VFA L DP+IE HNG+ K KH D + +G D FV+S RVR GRS+
Sbjct: 817 ETYKVFAALLDPVIEARHNGYLKGAKHVTDLNPD-NLVGGDDLDANFVLSCRVRTGRSIR 875
Query: 436 GYPFNPCLTESQYKEME 486
G P T ++ +E+E
Sbjct: 876 GLGLPPHCTRAERREVE 892
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 510 SLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFW 650
SL+GE KG +YPL+ M+ Q QLIDDHFLF K L A+ R W
Sbjct: 135 SLDGEFKGKYYPLSNMTAAEQDQLIDDHFLFDKPVSPLLLASRMARDW 182
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 510 SLEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFW 650
+L+G LKG +YPL+ M+ Q+QLI+DHFLF K L +A R W
Sbjct: 901 TLDGPLKGKYYPLSKMTDAEQEQLINDHFLFDKPVSPLLLSARMARDW 948
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFW 650
L+G L G +Y L M++ Q QLIDDHFLF K L A+ R W
Sbjct: 505 LDGPLAGKYYSLMTMTEAEQDQLIDDHFLFDKPVSPLLLASRMARDW 551
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 11 DGCSSARKAATMVDAATLEKLEAGFSKLQGSD-SKSLLKKYLTREVFDSLKNKKTSFGST 187
+ S AR+ A +A +K + ++ G + ++ + K+LTR+V++ L N KT G T
Sbjct: 731 ESVSKAREEAIKKEAER-QKASSTLRRVPGPEQAQHYMAKFLTRDVYNKLCNLKTPSGFT 789
Query: 188 LLDCIQSGVEN 220
L IQ+GV+N
Sbjct: 790 LDGVIQTGVDN 800
Score = 31.1 bits (67), Expect = 0.81
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 119 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN 220
+ K +T++V+ L N +T G TL IQ+GV+N
Sbjct: 1 MAKCMTKDVYQRLSNLRTPSGYTLDMAIQTGVDN 34
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/81 (46%), Positives = 52/81 (64%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLE 435
ESY VFAEL DP+IE H G+KKTDKH D G LDP ++V+S+RVR GRS+
Sbjct: 2373 ESYDVFAELLDPVIELRHGGYKKTDKHKTDLNPDNLKGGALDP--KYVLSSRVRTGRSIR 2430
Query: 436 GYPFNPCLTESQYKEMEDKVS 498
G+ P + ++ + +E K+S
Sbjct: 2431 GFCLPPHCSRAERRSVE-KIS 2450
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 LEGELKGTFYPLTGMSKETQQQLIDDHFLF-KEGDRFLQAANACRFW 650
L+GE KG +YPL M+ E Q+QLI+DHFLF K L A R W
Sbjct: 2457 LDGEFKGKYYPLNKMTDEEQEQLINDHFLFDKPVSPLLTCAGMARDW 2503
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 119 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN 220
+ K LT+E++ SL++K T G TL D IQ+GV+N
Sbjct: 2323 MAKVLTKEIYRSLRDKSTKNGFTLDDIIQTGVDN 2356
>SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 309
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFK-KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSL 432
ESY F + + P+I+ YH GF T KH + + D A ++STR+R R+L
Sbjct: 9 ESYDDFKDFYYPVIQAYHKGFDINTSKHVTDMDPEKISTELSDSAKAKIISTRIRVARNL 68
Query: 433 EGYPFNP 453
+P NP
Sbjct: 69 SMFPLNP 75
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 510 SLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFW 650
SL +L G Y T M+ E +Q+L+DDHFLF+ D+ A+ FW
Sbjct: 95 SLGDDLAGNLYRHTTMTDEERQKLVDDHFLFRGKDKMQAASGYHEFW 141
>SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 383
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 ESYSVFAELFDPIIEDYHNGFK-KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSL 432
ESY F + + P+I+ YH GF T KH + + D A ++STR+R R+L
Sbjct: 101 ESYDDFKDFYYPVIQAYHKGFDINTSKHVTDMDPEKISTELSDSAKAKIISTRIRVARNL 160
Query: 433 EGYPFNP 453
+P NP
Sbjct: 161 SMFPLNP 167
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 510 SLEGELKGTFYPLTGMSKETQQQLIDDHFLFK 605
SL +L G Y T M+ E +Q+L+DDHFLF+
Sbjct: 187 SLGDDLAGNLYRHTTMTDEERQKLVDDHFLFR 218
>SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15)
Length = 132
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +2
Query: 113 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN 220
+++ ++LT E++ L ++KTS G TL IQ GV+N
Sbjct: 77 NIMARHLTPEMYVHLCDRKTSNGFTLDQAIQPGVDN 112
>SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13)
Length = 490
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 358 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTL 507
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L
Sbjct: 279 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQAL 325
>SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08)
Length = 322
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 358 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTL 507
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L
Sbjct: 270 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQAL 316
>SB_5784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +2
Query: 509 QPRGRAQGHVLPPHRHVEGDPAAAHRRPLPVQ 604
QPR R + P RH EGD AH PL VQ
Sbjct: 60 QPRLRPSPYAADPARHGEGD---AHTEPLEVQ 88
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 468 PVQGDGGQGLRHPVSLEGELKGTFYPLTGMSKE-TQQQLID 587
PV+G G G + ++ G ++G ++ TG KE + QQ+ID
Sbjct: 326 PVRGQGICGSCYALAAVGAVEGAYFMKTGKLKELSAQQVID 366
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 32 KAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSG 211
KAA + + L KL AG++ L D+ L + LT E LK K S + +Q
Sbjct: 195 KAAVQLLKSVLPKLTAGYADLYHGDA---LVEVLTTEWHGDLKEKYPQDVSGIYQLVQGQ 251
Query: 212 VENLD 226
+E+ D
Sbjct: 252 LESRD 256
>SB_6151| Best HMM Match : Extensin_2 (HMM E-Value=2.6)
Length = 287
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 527 QGHVLPPHRHVEGDPAAAHRRPLPVQGG-RPLPAGRQRLPLLA 652
Q H +P H V+ PA A P+P P+PA Q P A
Sbjct: 226 QVHPIPAHAQVDPIPAHAQVNPIPEHAQVDPIPAHAQANPATA 268
>SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11)
Length = 396
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 536 VLPPHRHVEGDPAAAHRRPLPVQGGRPLPAGRQRLP 643
+ PP +E +P + P P GRPL G + P
Sbjct: 190 IAPPSSLLESEPIVPQKEPDPSIDGRPLVTGDKEKP 225
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 446 KGYPSSERPQRTRVETTNS-PAGSRLPSVSTSP 351
+G SSERP+R+R T + P S LP +++P
Sbjct: 1178 RGSLSSERPERSRRRRTETEPRDSSLPCTASTP 1210
>SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6)
Length = 277
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = -1
Query: 163 VLQAVEYFPGKVLLQQRLRVGSLELAETSLQFLEGCGVDH 44
+ +AV P +V+L R+++GS +LA+ L+ L+G G++H
Sbjct: 204 ITRAVIDGPLRVVL--RVQIGSCDLADEHLRKLDGGGLEH 241
>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
Length = 362
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 237 PTPESKFSTPDWMQSRRVDPNEVFLFFRLSNTS 139
P P+ KFS P + SR +D E L F L+ S
Sbjct: 5 PKPKEKFSEPVIIASRNLDSVEARLAFNLTTVS 37
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 554 AGEGVERALELALEADRVPETLSSISLYWDSVR 456
AGE ++ A + A E D + E ++ IS WD ++
Sbjct: 3691 AGESLKEASQSAEEQDNLDEKVADISRRWDELK 3723
>SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12)
Length = 353
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 74 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 202
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 30 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 73
>SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11)
Length = 809
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 198 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 85
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 65 QDRAADKNHVYISYR-DCKKLDEEAFPEDLDEAPWSVL 101
>SB_25447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 752
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -3
Query: 560 RHAGEGVERALELALEADRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAG 381
R + G ERA + E+DRV E+ ++ VR+G +GY R SP G
Sbjct: 324 RKSPRGSERARKGTRESDRVRESPKG----YERVREGTRGYERVLEGTRESERVRESPRG 379
>SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24)
Length = 398
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 74 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 202
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 75 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 118
>SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4)
Length = 617
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 9 LTVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLS 113
LT V+VP+ Q +T RN + S+S+ DP L+
Sbjct: 534 LTAVEVPKPGDQDTTLDKERNNSVTSSSTPDPPLT 568
>SB_24839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 9 LTVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLS 113
LT V+VP+ Q +T RN + S+S+ DP L+
Sbjct: 70 LTAVEVPKPGDQDTTLDKERNNSVTSSSTPDPPLT 104
>SB_3| Best HMM Match : Peptidase_C21 (HMM E-Value=5)
Length = 186
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 259 SYSVFAELFDPIIEDYHNGFKKTDKHPPKNW-GDVDT 366
+Y + F+P +DY NG++ TD H W G++ T
Sbjct: 89 TYEQISITFEPY-QDYANGYRATDLHGKVAWVGELST 124
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,062,687
Number of Sequences: 59808
Number of extensions: 360480
Number of successful extensions: 1465
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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