Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00113
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    26   1.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.7  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   2.7  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   3.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   4.8  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   8.4  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 22  KCQKSRNNGRRRNPREIGGW 81
           K   SR N RRR+PR  G W
Sbjct: 249 KIPPSRRNPRRRSPRSGGRW 268


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +3

Query: 468 PVQGDGGQGLRHPVSLEGELKGTFYPL--TGMSKETQQQLIDDH 593
           P   +G +GL+ P    GELK    PL  TG S       + +H
Sbjct: 40  PGSNNGQEGLKGPGGARGELKQFDLPLGNTGNSGNNNNNGVGNH 83


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +1

Query: 262  YSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRV 414
            Y+  A L+DP I  ++    K     P  +     +  +DP GEF  +  V
Sbjct: 2692 YNYRARLYDPDIGRFYQMDPKEQYPSPYVYAGNSPVSLIDPDGEFAFTLAV 2742


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 443 GYPSSERPQRTRVETTNSPAGSR 375
           G  S + PQR+  + T+SP GS+
Sbjct: 300 GSDSEDLPQRSAEDRTHSPVGSQ 322


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 12   TVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTL 134
            T+ +V  +P+  S   PS NWRL+  +     LS   RSTL
Sbjct: 921  TMTEVLLEPKV-SLENPSVNWRLLWRNIHRSCLSSLQRSTL 960


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +2

Query: 92  LQGSDSKSLLKKY--LTREVFDSLKNKKTSFGSTL-LDCIQSGVENLDSGVGIYAPDASR 262
           L+  +S     KY   + E  D L+N +   GST   +C+ +G   L      + P   R
Sbjct: 744 LRSVESAERAAKYDIFSNECSDLLENCEA--GSTASAECVTNGDYMLQPSNAPFTPPTDR 801

Query: 263 TPCSP 277
           TP  P
Sbjct: 802 TPTPP 806


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 301 DYHNGFKKTDKHPPKNWG 354
           D HN   K  ++PPK++G
Sbjct: 448 DLHNQSVKAMRYPPKSYG 465


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,427
Number of Sequences: 2352
Number of extensions: 11161
Number of successful extensions: 38
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)