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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00112
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation fact...   171   3e-43
U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation fact...   164   6e-41
U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation fact...   164   6e-41
U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation fact...   148   4e-36
U51994-8|AAO21382.1|   77|Caenorhabditis elegans Elongation fact...   138   3e-33
Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...   113   1e-25
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...   113   1e-25
Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical pr...   101   5e-22
U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation f...    71   8e-13
AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial...    71   8e-13
D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation fact...    66   2e-11
D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation fact...    66   2e-11
AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongatio...    66   2e-11
Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical pr...    38   0.005
Z70780-15|CAA94822.2|  702|Caenorhabditis elegans Hypothetical p...    38   0.005
AC024817-55|AAF59563.3|  366|Caenorhabditis elegans Hypothetical...    35   0.063
AC006714-2|AAK29716.2|  689|Caenorhabditis elegans Hypothetical ...    34   0.083
Z81519-1|CAB04216.1|  750|Caenorhabditis elegans Hypothetical pr...    33   0.19 
Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical pr...    33   0.25 
M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation fact...    33   0.25 
L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical pr...    32   0.34 
L40996-1|AAA86431.1|  593|Caenorhabditis elegans GTP-binding pro...    31   0.78 
AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditi...    31   0.78 
AC025716-9|AAK39619.1|  469|Caenorhabditis elegans Hypothetical ...    31   0.78 
U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation fact...    31   1.0  
M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.        31   1.0  
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr...    30   1.8  
AF022984-10|AAB69958.1|  358|Caenorhabditis elegans Hypothetical...    30   1.8  
Z81139-5|CAB03481.2|  359|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z66513-12|CAI46602.1|  492|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z66513-11|CAA91332.3|  427|Caenorhabditis elegans Hypothetical p...    29   2.4  
AL008869-2|CAC42315.1|  810|Caenorhabditis elegans Hypothetical ...    29   2.4  
AL008869-1|CAA15516.1|  808|Caenorhabditis elegans Hypothetical ...    29   2.4  
AB032749-1|BAA92158.1|  810|Caenorhabditis elegans EAT-20B protein.    29   2.4  
AB032748-1|BAA92157.1|  808|Caenorhabditis elegans EAT-20A protein.    29   2.4  
Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z75710-2|CAB00025.2|  381|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical pr...    27   9.6  
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas...    27   9.6  
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ...    27   9.6  
AF040643-5|AAT81201.1|  299|Caenorhabditis elegans Hypothetical ...    27   9.6  

>U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation factor
           protein 4, isoformc protein.
          Length = 267

 Score =  171 bits (417), Expect = 3e-43
 Identities = 96/144 (66%), Positives = 101/144 (70%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
           ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKN
Sbjct: 71  ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKN 130

Query: 437 GQTREHALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLS 616
           GQTREHALLA TLGVKQL       + L   T SPD          +SRR  T Q L   
Sbjct: 131 GQTREHALLAQTLGVKQL-------VSLRSPTRSPD----------SSRRSDTIQRLFHL 173

Query: 617 CPFLDGTETTCWSLQPKCLGSRDG 688
               D TETTC      C GSRDG
Sbjct: 174 SQSPDSTETTCLRSPRTCHGSRDG 197



 Score =  148 bits (358), Expect = 4e-36
 Identities = 68/69 (98%), Positives = 68/69 (98%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 228 DKLKAERER 254
           DKLKAERER
Sbjct: 61  DKLKAERER 69


>U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation factor
           protein 4, isoforma protein.
          Length = 463

 Score =  164 bits (398), Expect = 6e-41
 Identities = 77/84 (91%), Positives = 80/84 (95%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
           ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKN
Sbjct: 71  ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKN 130

Query: 437 GQTREHALLAFTLGVKQLIVGVNK 508
           GQTREHALLA TLGVKQLIV  NK
Sbjct: 131 GQTREHALLAQTLGVKQLIVACNK 154



 Score =  148 bits (358), Expect = 4e-36
 Identities = 68/69 (98%), Positives = 68/69 (98%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 228 DKLKAERER 254
           DKLKAERER
Sbjct: 61  DKLKAERER 69



 Score =  106 bits (254), Expect = 2e-23
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = +1

Query: 505 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 684
           +MDSTEPP+SE RF EI  EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKG
Sbjct: 154 KMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKG 213

Query: 685 W 687
           W
Sbjct: 214 W 214


>U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation factor
           protein 3 protein.
          Length = 463

 Score =  164 bits (398), Expect = 6e-41
 Identities = 77/84 (91%), Positives = 80/84 (95%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
           ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKN
Sbjct: 71  ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKN 130

Query: 437 GQTREHALLAFTLGVKQLIVGVNK 508
           GQTREHALLA TLGVKQLIV  NK
Sbjct: 131 GQTREHALLAQTLGVKQLIVACNK 154



 Score =  148 bits (358), Expect = 4e-36
 Identities = 68/69 (98%), Positives = 68/69 (98%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 228 DKLKAERER 254
           DKLKAERER
Sbjct: 61  DKLKAERER 69



 Score =  106 bits (254), Expect = 2e-23
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = +1

Query: 505 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 684
           +MDSTEPP+SE RF EI  EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKG
Sbjct: 154 KMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKG 213

Query: 685 W 687
           W
Sbjct: 214 W 214


>U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation factor
           protein 4, isoformd protein.
          Length = 429

 Score =  148 bits (358), Expect = 4e-36
 Identities = 68/69 (98%), Positives = 68/69 (98%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 228 DKLKAERER 254
           DKLKAERER
Sbjct: 61  DKLKAERER 69



 Score =  106 bits (254), Expect = 2e-23
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = +1

Query: 505 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 684
           +MDSTEPP+SE RF EI  EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKG
Sbjct: 120 KMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKG 179

Query: 685 W 687
           W
Sbjct: 180 W 180



 Score =   99 bits (238), Expect = 1e-21
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 397
           ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 71  ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117


>U51994-8|AAO21382.1|   77|Caenorhabditis elegans Elongation factor
           protein 4, isoformb protein.
          Length = 77

 Score =  138 bits (335), Expect = 3e-33
 Identities = 63/67 (94%), Positives = 64/67 (95%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60

Query: 228 DKLKAER 248
           DKLK  +
Sbjct: 61  DKLKVTK 67


>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score =  113 bits (272), Expect = 1e-25
 Identities = 53/84 (63%), Positives = 63/84 (75%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
           +T+DI    FETS   + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G    
Sbjct: 234 VTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENG 293

Query: 437 GQTREHALLAFTLGVKQLIVGVNK 508
           GQT+EHALL  +LGV QLIV VNK
Sbjct: 294 GQTKEHALLLRSLGVTQLIVAVNK 317



 Score = 85.0 bits (201), Expect = 5e-17
 Identities = 37/66 (56%), Positives = 49/66 (74%)
 Frame = +3

Query: 57  EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 236
           +K  IN++V+GHVD+GKST  GHL++    +D RTI+KF+ EA   GK SF YAWVLD+ 
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226

Query: 237 KAERER 254
           + ERER
Sbjct: 227 EEERER 232



 Score = 37.5 bits (83), Expect = 0.009
 Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
 Frame = +1

Query: 529 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 684
           +S+ RF+EIK  +S ++ ++ G++     FVP+SG+ G+N+++   ++ W+ G
Sbjct: 323 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWYDG 372


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score =  113 bits (272), Expect = 1e-25
 Identities = 53/84 (63%), Positives = 63/84 (75%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
           +T+DI    FETS   + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G    
Sbjct: 252 VTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENG 311

Query: 437 GQTREHALLAFTLGVKQLIVGVNK 508
           GQT+EHALL  +LGV QLIV VNK
Sbjct: 312 GQTKEHALLLRSLGVTQLIVAVNK 335



 Score = 85.0 bits (201), Expect = 5e-17
 Identities = 37/66 (56%), Positives = 49/66 (74%)
 Frame = +3

Query: 57  EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 236
           +K  IN++V+GHVD+GKST  GHL++    +D RTI+KF+ EA   GK SF YAWVLD+ 
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244

Query: 237 KAERER 254
           + ERER
Sbjct: 245 EEERER 250



 Score = 37.5 bits (83), Expect = 0.009
 Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
 Frame = +1

Query: 529 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 684
           +S+ RF+EIK  +S ++ ++ G++     FVP+SG+ G+N+++   ++ W+ G
Sbjct: 341 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWYDG 390


>Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical
           protein H19N07.1 protein.
          Length = 532

 Score =  101 bits (242), Expect = 5e-22
 Identities = 44/83 (53%), Positives = 60/83 (72%)
 Frame = +2

Query: 260 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 439
           T+++    FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A  GEFE G  + G
Sbjct: 174 TVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGG 233

Query: 440 QTREHALLAFTLGVKQLIVGVNK 508
           QTREH++L  T GVK L++ VNK
Sbjct: 234 QTREHSMLVKTAGVKHLVILVNK 256



 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 34/68 (50%), Positives = 49/68 (72%)
 Frame = +3

Query: 51  GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 230
           G  K HIN+V +GHVD+GKST  G L++  G +DKRT+EK+E+EA+E G+ S+  +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163

Query: 231 KLKAERER 254
               ERE+
Sbjct: 164 TNDEEREK 171



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
 Frame = +1

Query: 505 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPST--KMPW 675
           +MD     + E RF+EI+ +++ +++K+G+NP   + +VP SG  G  + +  T  +  W
Sbjct: 256 KMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSEGNW 315

Query: 676 FKG 684
           + G
Sbjct: 316 YSG 318


>U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 2 protein.
          Length = 439

 Score = 70.9 bits (166), Expect = 8e-13
 Identities = 39/84 (46%), Positives = 52/84 (61%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
           ITI++A   +E+     +  D PGH DFIKNMI GTSQ D AVL++AA  G  E      
Sbjct: 94  ITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------ 147

Query: 437 GQTREHALLAFTLGVKQLIVGVNK 508
            QT+EH +LA  +GVK + + +NK
Sbjct: 148 -QTKEHLILAKQVGVKNMAIFINK 170



 Score = 28.7 bits (61), Expect = 4.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 60  KTHINIVVIGHVDSGKSTTT 119
           K ++N+  IGH+D GK+T T
Sbjct: 43  KINVNVGTIGHIDHGKTTLT 62


>AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial
           elongation factorTu homologue protein.
          Length = 439

 Score = 70.9 bits (166), Expect = 8e-13
 Identities = 39/84 (46%), Positives = 52/84 (61%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
           ITI++A   +E+     +  D PGH DFIKNMI GTSQ D AVL++AA  G  E      
Sbjct: 94  ITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------ 147

Query: 437 GQTREHALLAFTLGVKQLIVGVNK 508
            QT+EH +LA  +GVK + + +NK
Sbjct: 148 -QTKEHLILAKQVGVKNMAIFINK 170



 Score = 28.7 bits (61), Expect = 4.1
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 60  KTHINIVVIGHVDSGKSTTT 119
           K ++N+  IGH+D GK+T T
Sbjct: 43  KINVNVGTIGHIDHGKTTLT 62


>D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 495

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
           ITI+    ++ET+K +   ID PGH D+IKNMITG +Q + A+L+VAA  G         
Sbjct: 98  ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------ 151

Query: 437 GQTREHALLAFTLGV--KQLIVGVNK 508
            QTREH LLA  +GV    ++V +NK
Sbjct: 152 -QTREHLLLARQVGVPLDNIVVFMNK 176



 Score = 36.3 bits (80), Expect = 0.021
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +3

Query: 54  KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 224
           ++K H+N+  IGHVD GK+T T     ++    G   R  E  +   +E  +G    A+ 
Sbjct: 45  RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104

Query: 225 LDKLKAER 248
           L+   A+R
Sbjct: 105 LEYETAKR 112


>D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 496

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
           ITI+    ++ET+K +   ID PGH D+IKNMITG +Q + A+L+VAA  G         
Sbjct: 99  ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------ 152

Query: 437 GQTREHALLAFTLGV--KQLIVGVNK 508
            QTREH LLA  +GV    ++V +NK
Sbjct: 153 -QTREHLLLARQVGVPLDNIVVFMNK 177



 Score = 36.3 bits (80), Expect = 0.021
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +3

Query: 54  KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 224
           ++K H+N+  IGHVD GK+T T     ++    G   R  E  +   +E  +G    A+ 
Sbjct: 46  RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105

Query: 225 LDKLKAER 248
           L+   A+R
Sbjct: 106 LEYETAKR 113


>AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 1 protein.
          Length = 496

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
           ITI+    ++ET+K +   ID PGH D+IKNMITG +Q + A+L+VAA  G         
Sbjct: 99  ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------ 152

Query: 437 GQTREHALLAFTLGV--KQLIVGVNK 508
            QTREH LLA  +GV    ++V +NK
Sbjct: 153 -QTREHLLLARQVGVPLDNIVVFMNK 177



 Score = 36.3 bits (80), Expect = 0.021
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +3

Query: 54  KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 224
           ++K H+N+  IGHVD GK+T T     ++    G   R  E  +   +E  +G    A+ 
Sbjct: 46  RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105

Query: 225 LDKLKAER 248
           L+   A+R
Sbjct: 106 LEYETAKR 113


>Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical
           protein C47B2.7b protein.
          Length = 500

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 25/86 (29%), Positives = 43/86 (50%)
 Frame = +2

Query: 305 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 484
           + +ID PGH   I+ ++  ++  D A++I+     +  AGI    QT EH LLA      
Sbjct: 74  LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126

Query: 485 QLIVGVNKWIPLNHHTVSPDLRKSRR 562
           ++I+ +NK        +S   +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152



 Score = 28.7 bits (61), Expect = 4.1
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +3

Query: 69  INIVVIGHVDSGKSTTT 119
           +N+ ++GHVDSGK+T T
Sbjct: 14  LNLGILGHVDSGKTTLT 30


>Z70780-15|CAA94822.2|  702|Caenorhabditis elegans Hypothetical
           protein F46B6.6a protein.
          Length = 702

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 32/85 (37%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = +2

Query: 257 ITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 433
           IT  I  +  E +K   VT +D PGH  F      G   AD  VL+VAA  G  E     
Sbjct: 189 ITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE----- 243

Query: 434 NGQTREHALLAFTLGVKQLIVGVNK 508
             QT +    A    V QL+V VNK
Sbjct: 244 --QTAQSIKFAKDANV-QLVVAVNK 265


>AC024817-55|AAF59563.3|  366|Caenorhabditis elegans Hypothetical
           protein Y54G2A.28 protein.
          Length = 366

 Score = 34.7 bits (76), Expect = 0.063
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -1

Query: 513 IHLFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 379
           ++LF PT+SC+  +  AS   S   P +  PA N  VP AT+S +
Sbjct: 11  LNLFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54


>AC006714-2|AAK29716.2|  689|Caenorhabditis elegans Hypothetical
           protein Y119D3B.14 protein.
          Length = 689

 Score = 34.3 bits (75), Expect = 0.083
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +3

Query: 72  NIVVIGHVDSGKSTTTGHLIYKCGGI 149
           NI VI HVD+GK+T T  L+Y  G I
Sbjct: 27  NIGVIAHVDAGKTTVTERLLYLAGAI 52


>Z81519-1|CAB04216.1|  750|Caenorhabditis elegans Hypothetical
           protein F29C12.4 protein.
          Length = 750

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 72  NIVVIGHVDSGKSTTTGHLIYKCGGID 152
           NI +  H+DSGK+T T  ++Y  G ID
Sbjct: 46  NIGISAHIDSGKTTVTERILYYAGRID 72



 Score = 27.5 bits (58), Expect = 9.6
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +2

Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 409
           ITI  A    +     + IID PGH DF   +       D AVL++  G G
Sbjct: 98  ITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147


>Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical
           protein F25H5.4 protein.
          Length = 852

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 143
           M +++   N+ VI HVD GKST T  L+ K G
Sbjct: 13  MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44



 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +2

Query: 260 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 409
           T+++   K + + + + +ID+PGH DF   +       D A+++V   +G
Sbjct: 97  TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146


>M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation factor
           protein.
          Length = 852

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 48  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 143
           M +++   N+ VI HVD GKST T  L+ K G
Sbjct: 13  MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = +2

Query: 260 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 409
           T+++   K + + + + +ID+PGH DF   +       D A+++V   +G
Sbjct: 97  TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146


>L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical
           protein ZK1236.1 protein.
          Length = 645

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +3

Query: 72  NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 188
           N  ++ HVD GKST    L+  CG +    K+ ++K + E +
Sbjct: 44  NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85



 Score = 31.9 bits (69), Expect = 0.44
 Identities = 23/70 (32%), Positives = 33/70 (47%)
 Frame = +2

Query: 299 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 478
           Y + +ID PGH DF   +    +  D  +L+VAA  G          QT  +  LAF   
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154

Query: 479 VKQLIVGVNK 508
           + Q+I  +NK
Sbjct: 155 I-QIIPVINK 163


>L40996-1|AAA86431.1|  593|Caenorhabditis elegans GTP-binding
           protein protein.
          Length = 593

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 24  FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 134
           ++IRD P   K+     + V+G+VD+GKST  G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162


>AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditis
           gtp-binding proteinprotein 1 protein.
          Length = 613

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 24  FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 134
           ++IRD P   K+     + V+G+VD+GKST  G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162


>AC025716-9|AAK39619.1|  469|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.8 protein.
          Length = 469

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +2

Query: 302 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 481
           +V+ +D PGH   +  M+ G +  D A L+VA              QT EH      + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181

Query: 482 KQLIVGVNK 508
             L++  NK
Sbjct: 182 NHLMILQNK 190


>U50193-2|AAA91248.1|  974|Caenorhabditis elegans Elongation factor
           protein 1 protein.
          Length = 974

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +2

Query: 263 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 409
           + I      +  Y + IID PGH +F   M      AD  V++V A  G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237


>M86958-1|AAA21824.1|  849|Caenorhabditis elegans eft-1 protein.
          Length = 849

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +2

Query: 263 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 409
           + I      +  Y + IID PGH +F   M      AD  V++V A  G
Sbjct: 64  VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112


>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
           translation initiationfactor eIF5B protein.
          Length = 1074

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 311 IIDAPGHRDFIKNMITGTSQADCAVLIV 394
           IID PGH  F      G+S  D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580


>AF022984-10|AAB69958.1|  358|Caenorhabditis elegans Hypothetical
           protein ZK488.1 protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 33/123 (26%), Positives = 54/123 (43%)
 Frame = +2

Query: 275 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 454
           ++KFE+S + +T        +  K  ITGT      VL+V+    +F     K+ Q    
Sbjct: 104 VYKFESSLHRLTFGLTKSRTEDYKTKITGTLGKLQIVLVVSEAFWKFLNKRYKSAQIFFA 163

Query: 455 ALLAFTLGVKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDG 634
               F L + + I  +  W  L+ H+ +   RKS   YP+     A TQ++S     +D 
Sbjct: 164 FFPNFQLKILECIWHI--WATLDRHSATAVYRKS---YPNA----APTQIVSRRGVLMDL 214

Query: 635 TET 643
            +T
Sbjct: 215 AKT 217


>Z81139-5|CAB03481.2|  359|Caenorhabditis elegans Hypothetical
           protein W05H5.6 protein.
          Length = 359

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = +3

Query: 207 FKYAWVLDKLKAERERVSQSILLSGSSKLASTMLPSLMLLDTEISS 344
           + Y+W+   L    ERV  S+L+         ++P+++L+ ++  S
Sbjct: 134 YMYSWIFGVLTVAVERVIASVLIENYESNTQNLMPAILLIISQFLS 179


>Z66513-12|CAI46602.1|  492|Caenorhabditis elegans Hypothetical
           protein F54D5.5b protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 150 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 251
           +KR ++  EKE  +     F Y   LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305


>Z66513-11|CAA91332.3|  427|Caenorhabditis elegans Hypothetical
           protein F54D5.5a protein.
          Length = 427

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 150 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 251
           +KR ++  EKE  +     F Y   LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240


>AL008869-2|CAC42315.1|  810|Caenorhabditis elegans Hypothetical
           protein H30A04.1b protein.
          Length = 810

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 569 PHTSRRLATTQLLSLSCPFLD 631
           PH SR   T   L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178


>AL008869-1|CAA15516.1|  808|Caenorhabditis elegans Hypothetical
           protein H30A04.1a protein.
          Length = 808

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 569 PHTSRRLATTQLLSLSCPFLD 631
           PH SR   T   L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178


>AB032749-1|BAA92158.1|  810|Caenorhabditis elegans EAT-20B protein.
          Length = 810

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 569 PHTSRRLATTQLLSLSCPFLD 631
           PH SR   T   L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178


>AB032748-1|BAA92157.1|  808|Caenorhabditis elegans EAT-20A protein.
          Length = 808

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 569 PHTSRRLATTQLLSLSCPFLD 631
           PH SR   T   L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178


>Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical
           protein C47B2.7a protein.
          Length = 459

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +3

Query: 69  INIVVIGHVDSGKSTTT 119
           +N+ ++GHVDSGK+T T
Sbjct: 14  LNLGILGHVDSGKTTLT 30


>Z75710-2|CAB00025.2|  381|Caenorhabditis elegans Hypothetical
           protein D1081.4 protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +2

Query: 305 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 400
           V IID+ G RDFI  KN+  GT  AD  +++ AA
Sbjct: 73  VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104


>Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical
           protein K10C3.5b protein.
          Length = 705

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 305 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 394
           + +ID+PGH DF   + +    +D A+L++
Sbjct: 85  INLIDSPGHVDFSGEVTSALILSDIALLLI 114


>Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical
           protein K10C3.5a protein.
          Length = 894

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 305 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 394
           + +ID+PGH DF   + +    +D A+L++
Sbjct: 85  INLIDSPGHVDFSGEVTSALILSDIALLLI 114


>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
           protein.
          Length = 1276

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 479 VKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLS 610
           V ++  G+N  IP+   +  P L  S+++YP  +R   + +LL+
Sbjct: 134 VTKVTAGLNGGIPILTTSGMPSLLNSKKEYPFLTRMQGSYRLLA 177


>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
           protein T01A4.1c protein.
          Length = 1276

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 479 VKQLIVGVNKWIPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLS 610
           V ++  G+N  IP+   +  P L  S+++YP  +R   + +LL+
Sbjct: 134 VTKVTAGLNGGIPILTTSGMPSLLNSKKEYPFLTRMQGSYRLLA 177


>AF040643-5|AAT81201.1|  299|Caenorhabditis elegans Hypothetical
           protein F14D2.15 protein.
          Length = 299

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
 Frame = -3

Query: 490 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 332
           E + +E E   G+   L V RD  F +     +GTGS + H   ++R   DH  + +   
Sbjct: 24  EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83

Query: 331 VSRSINDGNI 302
            S S +D  I
Sbjct: 84  FSGSKSDAEI 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,242,583
Number of Sequences: 27780
Number of extensions: 344245
Number of successful extensions: 1144
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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