Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00112
(690 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 175 2e-46
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 175 2e-46
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 172 3e-45
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 170 9e-45
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.7
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.6
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 4.8
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 8.4
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.4
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.4
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 175 bits (427), Expect = 2e-46
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN
Sbjct: 14 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 73
Query: 437 GQTREHALLAFTLGVKQLIVGVNK 508
GQTREHALLAFTLGVKQLIVGVNK
Sbjct: 74 GQTREHALLAFTLGVKQLIVGVNK 97
Score = 130 bits (315), Expect = 9e-33
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = +1
Query: 505 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 684
+MDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKG
Sbjct: 97 KMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKG 156
Query: 685 W 687
W
Sbjct: 157 W 157
Score = 29.5 bits (63), Expect = 0.032
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 219 WVLDKLKAERER 254
WVLDKLKAERER
Sbjct: 1 WVLDKLKAERER 12
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 175 bits (427), Expect = 2e-46
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN
Sbjct: 71 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 130
Query: 437 GQTREHALLAFTLGVKQLIVGVNK 508
GQTREHALLAFTLGVKQLIVGVNK
Sbjct: 131 GQTREHALLAFTLGVKQLIVGVNK 154
Score = 147 bits (357), Expect = 8e-38
Identities = 68/69 (98%), Positives = 68/69 (98%)
Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 228 DKLKAERER 254
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 130 bits (315), Expect = 9e-33
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = +1
Query: 505 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 684
+MDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKG
Sbjct: 154 KMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKG 213
Query: 685 W 687
W
Sbjct: 214 W 214
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 172 bits (418), Expect = 3e-45
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +2
Query: 257 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 436
ITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKN
Sbjct: 71 ITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKN 130
Query: 437 GQTREHALLAFTLGVKQLIVGVNK 508
GQTREHALLAFTLGVKQLIVGVNK
Sbjct: 131 GQTREHALLAFTLGVKQLIVGVNK 154
Score = 147 bits (357), Expect = 8e-38
Identities = 68/69 (98%), Positives = 68/69 (98%)
Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 227
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 228 DKLKAERER 254
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 122 bits (295), Expect = 2e-30
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +1
Query: 505 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 684
+MD T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+KG
Sbjct: 154 KMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKG 213
Query: 685 WQ 690
W+
Sbjct: 214 WK 215
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 170 bits (414), Expect = 9e-45
Identities = 81/81 (100%), Positives = 81/81 (100%)
Frame = +2
Query: 266 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 445
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 446 REHALLAFTLGVKQLIVGVNK 508
REHALLAFTLGVKQLIVGVNK
Sbjct: 61 REHALLAFTLGVKQLIVGVNK 81
Score = 130 bits (315), Expect = 9e-33
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = +1
Query: 505 QMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 684
+MDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKG
Sbjct: 81 KMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKG 140
Query: 685 W 687
W
Sbjct: 141 W 141
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 305 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 409
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.51
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 60 KTHINIVVIGHVDSGKST 113
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 69 INIVVIGHVDSGKST 113
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 61 FSLPIFG*SRITNCV*Y 11
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 290 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 391
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 290 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 391
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/44 (22%), Positives = 19/44 (43%)
Frame = +1
Query: 493 RRSKQMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 624
R K + S Y+ + ++Y KK+ YN + +P+
Sbjct: 77 REPKIISSLSNNYNYSNYNNYNNNYNNYNKKLYYNINYIEQIPV 120
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 484 TAHRRSKQMDSTEPPYSEPRFEEIKKEV 567
T+ R++ S PP ++PR E + + V
Sbjct: 725 TSLERTQPTMSQMPPTAQPRMERLAEAV 752
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 666 FG*RLQHVVSVPSRNGHESDSSWV 595
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 509 WIPLNHHTVSPDLRKSRRKY 568
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,452
Number of Sequences: 438
Number of extensions: 4291
Number of successful extensions: 28
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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