Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00108
(716 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 40 0.002
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 38 0.011
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 37 0.014
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 36 0.025
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 36 0.043
SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09) 35 0.076
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 34 0.13
SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07) 32 0.53
SB_15403| Best HMM Match : CH (HMM E-Value=0) 31 0.71
SB_19572| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 30 2.2
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 3.8
SB_26126| Best HMM Match : Ldl_recept_b (HMM E-Value=3e-24) 29 3.8
SB_20641| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_26400| Best HMM Match : RVT_1 (HMM E-Value=1.1e-30) 29 5.0
SB_50095| Best HMM Match : Lipase_GDSL (HMM E-Value=3.3) 28 6.6
SB_44646| Best HMM Match : Lipase_GDSL (HMM E-Value=0.00024) 28 6.6
SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09) 28 6.6
SB_7711| Best HMM Match : Lipase_GDSL (HMM E-Value=8.1e-05) 28 6.6
SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004) 28 6.6
SB_53875| Best HMM Match : Glu_synthase (HMM E-Value=0) 28 8.7
SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_47002| Best HMM Match : RVT_1 (HMM E-Value=1.5e-16) 28 8.7
SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) 28 8.7
SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30) 28 8.7
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 28 8.7
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 504
PC V C AG+ C + G A C C+ +CP D + VC + T+ + CE++R
Sbjct: 58 PCSNVFCHAGQEC-VAAKGKASCECLSECP---DHIKPVCGSDGVTYPNHCELHR 108
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGD---AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQH 510
PC C G VC GD C C CP D VC+ FN+ +++ CE+ H
Sbjct: 116 PCRDTFCPRGGVCTPYVEGDRSYTTCECPTSCPDLDDP---VCSIFNQEFKNACEM---H 169
Query: 511 AYASTTLISAVVRN 552
YA +S ++N
Sbjct: 170 KYACKLQMSMAIKN 183
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 39.1 bits (87), Expect = 0.004
Identities = 31/109 (28%), Positives = 49/109 (44%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQHAYA 519
PC CSA + G+A+C C+ CP D VC + + + + C++ RQ+A
Sbjct: 250 PCQTSPCSAPYAKCLVVQGEAVCTCL-SCPNMLDP---VCGSDGKNYDNVCKL-RQNACK 304
Query: 520 STTLISAVVRNTTTFKSSITERAEKCLTALKARCLTSPVACGTGFLTSC 666
+ TLI+ + R+ F TE + KAR + P G +C
Sbjct: 305 TNTLITLISRDACPF----TEARFTPPSQNKARTTSGPTTAGPCSNVTC 349
Score = 31.9 bits (69), Expect = 0.53
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQHAYA 519
PC+ C+A ++ G A+C C+ CP + VC + + + ++CE+ +Q A
Sbjct: 181 PCMTKACTAPYSKCMSVRGKAVCMCM-SCP---KMNKPVCGSNGKDYNNECEL-QQFACK 235
Query: 520 STTLISAVVRN 552
+ T+I+ R+
Sbjct: 236 TNTMITVARRS 246
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 498
PCL V C CE DA C C + CP D VC ET+ + C +
Sbjct: 302 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRL 351
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 498
PCL V C CE DA C C + CP D VC ET+ + C +
Sbjct: 36 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRL 85
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 492
PCL V C CE DA C C + CP D VC ET+ + C
Sbjct: 79 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLC 126
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQH 510
PC + C+ C+ DA C C + CP D R C + T+++DC +Y+++
Sbjct: 151 PCENMQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDC-LYKKY 203
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 PCLKVHCSAG-RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 507
PC CSA CE+ ++ +A+C C KDCP E D+ VC +T+ ++C + +Q
Sbjct: 1766 PCQNFICSAPYSSCEVKDN-EAVCECPKDCPKE-DAE--VCGTNWKTYTNECMMRKQ 1818
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 340 PCLKVHCS-AGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 504
PC + C G VC + C C CP S+R VC + T+ S CE++R
Sbjct: 2977 PCERYKCRYQGEVCVTDSRNVPRCVCPPGCPPAEVSQR-VCASDGLTYPSVCEMHR 3031
Score = 31.9 bits (69), Expect = 0.53
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 340 PCLKVHCSAGRV--CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQHA 513
PC +CS+ C+ + G A C C +DCP + + VC + N + ++C + + A
Sbjct: 1348 PCEGFNCSSPPYSSCQAKD-GKATCECSEDCP---KTLKPVCGSDNNDYDNEC-LMQARA 1402
Query: 514 YASTTLISA 540
A+ I+A
Sbjct: 1403 CATNKTITA 1411
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 340 PCLKVHC-SAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 504
PC++ C S GD+ CI CP ++ +C + N T+ S C + R
Sbjct: 1836 PCVRYDCGSTNPYSTCKPKGDSGFECI--CPTCPKAKDYLCASNNLTYMSKCHLER 1889
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQHAYA 519
PC V C C G A+C C +CP E VC T+ S C + + A
Sbjct: 779 PCKNVECKFKARCVGLPDGSAVCECNTECPSEASP---VCGQDGRTYSSTCAMDARACQA 835
Query: 520 STTL 531
T++
Sbjct: 836 QTSI 839
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 492
PCLK+ C C + G A C C DC + + VC T+ ++C
Sbjct: 228 PCLKISCKFHSRCVKSSGGSANCVCPSDCSH---TYSPVCGGDKTTYINNC 275
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQHAYA 519
PC ++ CS C + +G A C C + C + VC + + C + R
Sbjct: 709 PCSRISCSHYGRCVVRNNGKAHCVCPRQCQVRF---KPVCGTDGREYLNRCFLRRNACRT 765
Query: 520 STTL 531
T++
Sbjct: 766 QTSI 769
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQHAYA 519
PC V C C++ + G C C C YE VC +T+ + CE+ R A
Sbjct: 1271 PCDNVSCDYYAQCQVEDDGSTSCKCPIFCTYE---YMPVCGTDGKTYGNKCEM-RASACL 1326
Query: 520 STTLIS 537
+T+++
Sbjct: 1327 KSTMVT 1332
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 498
PC C G+ C + +G A C C CP D VC + +T+ + C++
Sbjct: 1573 PCEITLCDKGKRCLL-VNGTATCECFSACP---DIYDPVCASNGKTYSNRCDM 1621
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNC-IKDCPYETDSRRMVCTNFNETWQSDC 492
PC + C+ + + G+ MC C + +CP + VC + T+ ++C
Sbjct: 1865 PCGNIKCTHKQQQCVVRSGEPMCECVVNECPKNSSK---VCGSDGWTYDNEC 1913
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 35.5 bits (78), Expect = 0.043
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQH 510
PCL V C CE DA C C CP D VC +T+ + C ++++H
Sbjct: 191 PCLNVTCEYFAECEAFAADDAQCVCPSKCPAYID---QVCGTNGQTFDNLC-LFKKH 243
>SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09)
Length = 217
Score = 34.7 bits (76), Expect = 0.076
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQHAYA 519
PC K C G +C + G C C CP ++ VC+ + + + CE+ H +A
Sbjct: 13 PCSKRVCMWGEMCRADSSGFTYCECPVSCP---NTYEPVCSVYGIQFPNKCEL---HMFA 66
Query: 520 STTLISAVVRN 552
++ V+N
Sbjct: 67 CIEGVNIGVKN 77
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 498
PC V C C G +C C+ CP + + VC + T++S+CE+
Sbjct: 1407 PCSTVTCLYHSKCFPQADGTGVCICLDQCPPD-NQNASVCGSDLVTYRSECEL 1458
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 498
PC C G CEI E G +C C C D VC + +T+ + C +
Sbjct: 1798 PCKSATCQFGGRCEIQEDGTEVCICPTYCRLNYDP---VCGSNRKTYLNFCSL 1847
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 492
PC + C + C ++ A C C K CP S +C + +T+ + C
Sbjct: 1337 PCNRTQCPSYSRCVLDSSLQAKCVCTKSCPL---SYEPLCASNGKTFPNQC 1384
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 343 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ--HAY 516
C + C +C + G C+C CP S + VC + +++ S+CE+ ++ A
Sbjct: 1659 CGNIRCPRFSMCISAQEGGIKCSCPIYCP---PSGQPVCGSDGKSYGSECELRKEACEAK 1715
Query: 517 ASTTLIS 537
TL+S
Sbjct: 1716 IKLTLVS 1722
Score = 28.7 bits (61), Expect = 5.0
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 11/120 (9%)
Frame = +1
Query: 343 CLKVHCSAGRVCEINEHGDAMCNCIKDCP--YE----TDSRRMVCTNFNETWQSDCEVYR 504
C KV C C + +G A C+C CP Y+ TD + + E
Sbjct: 1515 CSKVTCHRYAKCNNHYNGTASCSCSSRCPLVYKPVCGTDMETHINACLLKLKSCQIESDL 1574
Query: 505 QHAYASTTLIS-AVVRNTTTFKSSITERAEKCLTALKARC-LTSPVACGT---GFLTSCA 669
AY+ L + + + + + K RC LT + CG+ +L++CA
Sbjct: 1575 DVAYSGPCLPDPCLAKRCPPYAQCVPDHVLKARCTCPERCPLTYNLICGSDGVSYLSACA 1634
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 504
PC + C G C +G A C C +C T VC + +++ S C + R
Sbjct: 1729 PCDDLQCLHGSTCVRRVNGSASCQC-PEC--RTLKYTPVCGDDGKSYLSTCMLKR 1780
>SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 492
PC++V C VC+ DA C C +C + R C N T+ ++C
Sbjct: 276 PCIEVTCDFFAVCQAFGPKDARCICPHNCATYENQR---CGEDNVTYTNEC 323
>SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07)
Length = 396
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 352 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQH 510
+ C+ C+ DA C C + CP D R C + T+++DC +Y+++
Sbjct: 1 MQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDC-LYKKY 49
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 340 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 492
PC KV C+ C G C C + CP S ++VC + + + ++C
Sbjct: 1538 PCSKVKCAFYGQCVWYYDGRTQCECRRTCP---RSDQLVCGSDDRDYANEC 1585
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/66 (25%), Positives = 24/66 (36%)
Frame = +1
Query: 343 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQHAYAS 522
CL C G VC+ G C C C T VC + T+ + C + +
Sbjct: 701 CLVQPCKYGGVCQAGADGKTKCVCSAAC---TREYAPVCGSDGNTYNNLCLLTAARCQSQ 757
Query: 523 TTLISA 540
T + A
Sbjct: 758 TFIYRA 763
>SB_19572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 823
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 263 SASGIASRPSSQTFRARCVQPPRCPRGRAAPT 168
S+SG+ SR S T RAR PP P+ A+P+
Sbjct: 516 SSSGVPSRVGSATSRARQQPPPPPPQRPASPS 547
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -2
Query: 715 PSSGNEGSALYVSAMSRMMLKSQSRMRR--GKSDISLSVQSGISRH 584
PS G +YV+ RMMLK +R + D S+++G++RH
Sbjct: 1139 PSEEIRGYGVYVNGDMRMMLKGSNRTKALIENIDPDKSIRNGLARH 1184
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 379 EINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 507
+I EHGD +KDC E ++ ++ C N Q+ C + Q
Sbjct: 2540 DIKEHGDHHTLIVKDCRPE-ETGKLTCKARNSAGQAICSCFVQ 2581
>SB_26126| Best HMM Match : Ldl_recept_b (HMM E-Value=3e-24)
Length = 652
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +2
Query: 350 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASMLMPRQL 529
K+ Q ++ + T T T + T+PTR+ A + ++TKP + + + S++ +
Sbjct: 512 KTCTGQPITGQPTQPATTSTTPT-TMPTRKPSTAQPSVSTTKPNDVVKTHMTSVVTKPKP 570
Query: 530 *SVPWSAIPPR 562
S+P + P+
Sbjct: 571 TSIPPTTGSPK 581
>SB_20641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +1
Query: 499 YRQHAYASTTLISA-VVRNTTTFKSSITER----AEKCLTALKARCLTSPVAC 642
+R H +++ +I+ + ++ T SS+ R E+C +K RC+ S V C
Sbjct: 272 FRSHEHSTLNVITINLTKDENTHISSLKHRRTTIVEECHVGVKGRCINSHVRC 324
>SB_26400| Best HMM Match : RVT_1 (HMM E-Value=1.1e-30)
Length = 1084
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 167 LDVQ*SWCGSAVPTPHTLASAVQMTAITRAN---ARRPFILPFDDAFLCEAGGSRVES 3
++V WC V P + A +TR N R ILP D L + GG++V S
Sbjct: 812 VEVPTDWCAPMVVVPKSNDQARICVDLTRLNDSVKRERHILPSVDGTLAQLGGAKVFS 869
>SB_50095| Best HMM Match : Lipase_GDSL (HMM E-Value=3.3)
Length = 162
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -3
Query: 285 KVVNSGYFCLRYRFSSKLSDIPCSMCSASEMSPRPSCSDVGRSVVVVRICGAYAAYTSVG 106
KV+N L+ S+ + P C + + PSC + R V + G Y Y S
Sbjct: 93 KVLNERAIVLKQVVSALVESSPGVFCWSHKFFRGPSCDPLLRDGVHMNHYGQYGLYRSYR 152
Query: 105 GA 100
GA
Sbjct: 153 GA 154
>SB_44646| Best HMM Match : Lipase_GDSL (HMM E-Value=0.00024)
Length = 196
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -3
Query: 285 KVVNSGYFCLRYRFSSKLSDIPCSMCSASEMSPRPSCSDVGRSVVVVRICGAYAAYTSVG 106
KV+N L+ S+ + P C + + PSC + R V + G Y Y S
Sbjct: 127 KVLNERAIVLKQVVSALVESSPGVFCWSHKFFRGPSCDPLLRDGVHMNHYGQYGLYRSYR 186
Query: 105 GA 100
GA
Sbjct: 187 GA 188
>SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09)
Length = 816
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +2
Query: 374 SAKSTNTETPCVTASRTV-PTRQTPDAWCAQTSTKPGNRIAKYTASM 511
+ KS N T + P + PDA + KPG I K T ++
Sbjct: 188 AVKSNNGSTKLANKQENIGPNKTKPDAKTPANANKPGKEITKQTKTL 234
>SB_7711| Best HMM Match : Lipase_GDSL (HMM E-Value=8.1e-05)
Length = 196
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -3
Query: 285 KVVNSGYFCLRYRFSSKLSDIPCSMCSASEMSPRPSCSDVGRSVVVVRICGAYAAYTSVG 106
KV+N L+ S+ + P C + + PSC + R V + G Y Y S
Sbjct: 127 KVLNERAIVLKQVVSALVESSPGVFCWSHKFFRGPSCDPLLRDGVHMNHYGQYGLYRSYR 186
Query: 105 GA 100
GA
Sbjct: 187 GA 188
>SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004)
Length = 445
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +2
Query: 305 KRMKTKKSTWKTLA*KSTAAQDVSAKST-----NTETPCVTASRTVPTRQTPDAWCAQTS 469
K +K KK K LA +S + A + + P TA +T PT TP A T+
Sbjct: 155 KPVKVKKEVNKALAMESAGFMNALATAAVAAPRKRKRPATTAQKT-PTATTPTTPTASTA 213
Query: 470 TKP 478
KP
Sbjct: 214 VKP 216
>SB_53875| Best HMM Match : Glu_synthase (HMM E-Value=0)
Length = 911
Score = 27.9 bits (59), Expect = 8.7
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Frame = +2
Query: 167 TSEQLGRGDISEA-EHIEHGMSESLDEKR-YLRQK*PELTTFSTRSLMKRMKTKKSTWKT 340
TS +L GD S E +H + E EK+ LR + + ++F R+L +R +
Sbjct: 741 TSNELRPGDHSAGTEAQDHKLEERKGEKKGSLRLRTVDPSSFRIRALSRRSRLSPHIINP 800
Query: 341 LA*--KSTAAQDVSAKSTNTETPCVTASRTVPTR 436
+ K S TE PC T ++ P+R
Sbjct: 801 VLGDVKEPLGTLASEFPAPTEEPCTTTAQRPPSR 834
>SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 933
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 355 HCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC-EVYRQHA--YAST 525
HC+ ++ E+ +C + +C +C N + ++ DC + Y+ A Y
Sbjct: 516 HCACRNGYQLKENSKYVCEDLNECNVANAGCEHICENTHGSFNCDCRQGYKLKAGGYGCE 575
Query: 526 TLISAVVRN 552
+ +V+N
Sbjct: 576 NINECLVKN 584
>SB_47002| Best HMM Match : RVT_1 (HMM E-Value=1.5e-16)
Length = 894
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -1
Query: 167 LDVQ*SWCGSAVPTPHT---LASAVQMTAITRANARRPFILPFDDAFLCEAGGSRVES 3
++V WC V P + + V +T + + R ILP D L + GG++V S
Sbjct: 120 VEVPTDWCAPMVVVPKSNDQVRICVDLTRLNDSVKRERHILPSVDETLAQLGGAKVFS 177
>SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05)
Length = 720
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +2
Query: 350 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASM 511
KS ST T +P T T P TP T+TK ++ A + +
Sbjct: 298 KSDQVTTTPKPSTTTTSPTKTTPTTTPPTTTPSTTTTSTTTKQTSKDASLESEL 351
>SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30)
Length = 1152
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -1
Query: 167 LDVQ*SWCGSAVPTPHT---LASAVQMTAITRANARRPFILPFDDAFLCEAGGSRVES 3
++V WC V P + + V +T + + R ILP D L + GG++V S
Sbjct: 431 VEVPTDWCAPMVVVPKSNDQVRICVDLTRLNDSVKRERHILPSVDETLAQLGGAKVFS 488
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +2
Query: 317 TKKSTWKTLA*KSTAAQDVSAKSTNTETPCV--TASRTVPTRQTPDAWCAQTSTKPGNRI 490
T +T A +TAA +A T T T V TA+ TV T A T+T
Sbjct: 136 TATATTTATAATATAAATATATGTTTATATVTATATATVTAAATATATATATATATTTST 195
Query: 491 AKYTAS 508
A TA+
Sbjct: 196 ATVTAT 201
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,168,402
Number of Sequences: 59808
Number of extensions: 444259
Number of successful extensions: 1629
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1615
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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