Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00107
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   5.4  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   9.4  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    23   9.4  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   9.4  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
 Frame = -3

Query: 479 SRCSVDTQKNKSSCPFPII-SLSP-DVSITVNRTRNNTVGVGSPINPHHSKVVFHKV 315
           S CS  +  + +SC      SL P     +V+        VG P NP    V+F  V
Sbjct: 236 SSCSPLSTASSASCSSSAAGSLCPTSPPASVSNGEQPASSVGDPANPQQPSVIFSPV 292


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +2

Query: 560 ENNWWVSKHIKK 595
           +NNWW+ + +K+
Sbjct: 125 DNNWWIGRLVKE 136


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 646 QNVIGMPINRCHSRTNGLLNMLRHPPIIFLLKIAN 542
           + +IGMP +R  +R +  LN L +   I+   +AN
Sbjct: 82  KRIIGMPGDRIMTRASFNLNPLSNTYTIYTSVLAN 116


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 303 SSHFLPFCICELHYCLGECNLTSILV 226
           SS+ LP    +LHYC+  C + S +V
Sbjct: 59  SSYVLPKLYAKLHYCV-SCAIHSKVV 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,545
Number of Sequences: 2352
Number of extensions: 16527
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)