Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00106
(715 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 37 0.014
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.043
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.057
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 35 0.057
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 35 0.057
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34) 32 0.40
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.53
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 32 0.53
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 32 0.53
SB_39796| Best HMM Match : VWA (HMM E-Value=0) 31 0.70
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 0.93
SB_29074| Best HMM Match : Kazal_2 (HMM E-Value=3.3e-16) 31 1.2
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 1.2
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09) 30 2.1
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 2.8
SB_15403| Best HMM Match : CH (HMM E-Value=0) 29 2.8
SB_42141| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 29 3.7
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_22648| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004) 28 6.5
SB_38061| Best HMM Match : DUF995 (HMM E-Value=4) 28 8.6
SB_28129| Best HMM Match : HR1 (HMM E-Value=6.7) 28 8.6
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 37.1 bits (82), Expect = 0.014
Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 8/114 (7%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGD---AMCNCIKDCPYETDSRRMVCTNFNETWQSDYRSIPPR 511
PC C G VC GD C C CP D VC+ FN+ +++
Sbjct: 116 PCRDTFCPRGGVCTPYVEGDRSYTTCECPTSCPDLDDP---VCSIFNQEFKNACEMHKYA 172
Query: 512 C-----LCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRRMRDWLF 658
C + + N+ C P + G M DC + + FP R DWL+
Sbjct: 173 CKLQMSMAIKNAGACVKP----TDPKMMG----MTDCPKWMLEQFPYRFLDWLY 218
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 36.7 bits (81), Expect = 0.019
Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Frame = +3
Query: 276 LTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 455
+T +T + +T T+ +TAA V+ T T T VTA+ TV T
Sbjct: 227 VTVTATAATTVTATVTAATTVTVTVTATAATTVTVTVTATVTATVTATVTVTATTTVTVT 286
Query: 456 CAQTST-----KPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERA-EKCLTALKA 617
T T +T A A+T ++A V TTT ++ T A T A
Sbjct: 287 ATATVTVIVTVTATLAVTVTVTETAAAATATVTATVTTTTTATATATTTATATATTTATA 346
Query: 618 RCLTSPVACGTGFLTSCAT 674
+ A T +T+ AT
Sbjct: 347 TATATATATATATVTATAT 365
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETW 481
PC V C AG+ C + G A C C+ +CP D + VC + T+
Sbjct: 58 PCSNVFCHAGQEC-VAAKGKASCECLSECP---DHIKPVCGSDGVTY 100
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQS 487
PCL V C CE DA C C + CP D VC ET+ +
Sbjct: 302 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDN 347
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQS 487
PCL V C CE DA C C + CP D VC ET+ +
Sbjct: 79 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDN 124
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQS 487
PCL V C CE DA C C + CP D VC ET+ +
Sbjct: 36 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDN 81
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 341 PCLKVHCSAG-RVCEINEHGDAMCNCIKDCPYE 436
PC CSA CE+ ++ +A+C C KDCP E
Sbjct: 1766 PCQNFICSAPYSSCEVKDN-EAVCECPKDCPKE 1797
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Frame = +2
Query: 341 PCLKVHCSAGRV--CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDYRSIPPRC 514
PC +CS+ C+ + G A C C +DCP + + VC + N + ++ C
Sbjct: 1348 PCEGFNCSSPPYSSCQAKD-GKATCECSEDCP---KTLKPVCGSDNNDYDNECLMQARAC 1403
Query: 515 -----LCLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRRMRD 649
+ + C + H Y TC+ + D E S R D
Sbjct: 1404 ATNKTITAHRNGYCDPCKNHSCSTPPYSTCKAVDDKAECVCSKVCPRSLD 1453
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSD 490
PC + C+ C+ DA C C + CP D R C + T+++D
Sbjct: 151 PCENMQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKND 197
>SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34)
Length = 1120
Score = 32.3 bits (70), Expect = 0.40
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +3
Query: 393 TETPCVTASRTVPTRQTPDAWCAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKS 572
T P +T S + + + + +T KPG R TE+ Y TT+++ R T S
Sbjct: 406 TRDPTLTHSVPIISGRLKTSMNKRTKPKPGERATEIKSPSTYQVTTMVTHSPR-VTEPAS 464
Query: 573 SITERAEKCLTALKARCLTSPVA 641
I + K +T LK + ++P+A
Sbjct: 465 PIA--STKQVTHLKGKGYSTPMA 485
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.53
Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 3/114 (2%)
Frame = +3
Query: 318 TKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQT---STKPGNR 488
T +T K A TAA+ + ST +T T+ T T T T ST
Sbjct: 411 TTPTTTKATASTQTAAEANTFLSTQ-KTDATTSQSTSTTEATKSQTTKATTTLSTSTTKA 469
Query: 489 ITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLTSPVACGT 650
T A+TTL ++ + TTT +S T K T+ TSP A T
Sbjct: 470 TTTSSTSTTKATTTLSTSTTKATTTPSTSTT----KATTSTAVEATTSPAATET 519
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQS 487
PCL V C CE DA C C CP D VC +T+ +
Sbjct: 191 PCLNVTCEYFAECEAFAADDAQCVCPSKCPAYID---QVCGTNGQTFDN 236
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 31.9 bits (69), Expect = 0.53
Identities = 32/120 (26%), Positives = 45/120 (37%), Gaps = 1/120 (0%)
Frame = +3
Query: 318 TKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRITE 497
T +T A +TAA +A T T T VTA+ T T A T+T T
Sbjct: 136 TATATTTATAATATAAATATATGTTTATATVTATATATV--TAAATATATATATATATTT 193
Query: 498 VYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLTSPV-ACGTGFLTSCAT 674
+T ++A T T + +TA A +T V A T +T+ T
Sbjct: 194 STATVTATATVTVTATAATTVTATVTAATTVTVTVTATAATTVTVTVTATVTATVTATVT 253
>SB_39796| Best HMM Match : VWA (HMM E-Value=0)
Length = 2119
Score = 31.5 bits (68), Expect = 0.70
Identities = 26/96 (27%), Positives = 40/96 (41%)
Frame = +3
Query: 276 LTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 455
LTT ST +L T ++ +T +TA + + +T T+ TA T QT +
Sbjct: 1754 LTTTSTGTLTSTHHTTHTSTETSTHVTTATETATEVTTATQVTTETAVSTAV--QTLTST 1811
Query: 456 CAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTT 563
T+T N + H ST + V +T T
Sbjct: 1812 HVTTATNTRNATLTLTHHKTETSTAVAMTTVPHTVT 1847
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPY 433
PCLK+ C C + G A C C DC +
Sbjct: 228 PCLKISCKFHSRCVKSSGGSANCVCPSDCSH 258
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQS 487
PC V C C G A+C C +CP E VC T+ S
Sbjct: 779 PCKNVECKFKARCVGLPDGSAVCECNTECPSEASP---VCGQDGRTYSS 824
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDC 427
PC ++ CS C + +G A C C + C
Sbjct: 709 PCSRISCSHYGRCVVRNNGKAHCVCPRQC 737
>SB_29074| Best HMM Match : Kazal_2 (HMM E-Value=3.3e-16)
Length = 711
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDYRSIPPRCLC 520
PC + C VC G + +D + ++ C ++T D +P +C
Sbjct: 349 PCQESDCGENEVCVPFPRGPCLIAKTRDGKMDVKCKQYQCVPIDQTCSEDV--LPKDMVC 406
Query: 521 LDNS----DQCRGPQYHHVQIEYYGTCRE 595
++ +C G H V Y G CRE
Sbjct: 407 GEDGVSYPSEC-GMIKHSVTFAYRGPCRE 434
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETW 481
PC C G CEI E G +C C C D VC + +T+
Sbjct: 1798 PCKSATCQFGGRCEIQEDGTEVCICPTYCRLNYDP---VCGSNRKTY 1841
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDYRSIPPRCLC 520
PC V C C G +C C+ CP + + VC + T++S+ C
Sbjct: 1407 PCSTVTCLYHSKCFPQADGTGVCICLDQCPPD-NQNASVCGSDLVTYRSECELKAKSCNA 1465
Query: 521 LDN 529
+ N
Sbjct: 1466 MRN 1468
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP 430
PC + C + C ++ A C C K CP
Sbjct: 1337 PCNRTQCPSYSRCVLDSSLQAKCVCTKSCP 1366
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 344 CLKVHCSAGRVCEINEHGDAMCNCIKDCP 430
C KV C C + +G A C+C CP
Sbjct: 1515 CSKVTCHRYAKCNNHYNGTASCSCSSRCP 1543
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYE 436
PC V C C++ + G C C C YE
Sbjct: 1271 PCDNVSCDYYAQCQVEDDGSTSCKCPIFCTYE 1302
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQS 487
PC C G+ C + +G A C C CP D VC + +T+ +
Sbjct: 1573 PCEITLCDKGKRCLL-VNGTATCECFSACP---DIYDPVCASNGKTYSN 1617
>SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09)
Length = 217
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP 430
PC K C G +C + G C C CP
Sbjct: 13 PCSKRVCMWGEMCRADSSGFTYCECPVSCP 42
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +3
Query: 387 TNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRITEVYRHDAYASTTLISAVV--RNTT 560
T T + T S T T TP + TST T +Y STT ++ +TT
Sbjct: 69 TTTTSYTSTTSYTTTTSYTPTT--SYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTT 126
Query: 561 TFKSSITERAEKCLTALKARCLTSPVACGTGFLTSCATWLNVES 692
++ S+ + + T + T+ C T + TS ++ + S
Sbjct: 127 SYTSTTSYTSTTSYTCTTSYTCTTSYTCTTSY-TSTTSYTSTTS 169
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/90 (27%), Positives = 36/90 (40%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDYRSIPPRCLC 520
PC CS R + +G A C C K C T VC + N+T+ + LC
Sbjct: 172 PCEISLCSFPRPICVEVNGTATCECPKVC---TLDYTPVCGSDNKTYAN---------LC 219
Query: 521 LDNSDQCRGPQYHHVQIEYYGTCREMPDCT 610
+ C+ +Q+ + G C PD T
Sbjct: 220 NLEVEACKPENTDKLQLLHDGPCPPTPDNT 249
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/98 (25%), Positives = 37/98 (37%)
Frame = +2
Query: 344 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDYRSIPPRCLCL 523
CL C G VC+ G C C C T VC + T+ + LCL
Sbjct: 701 CLVQPCKYGGVCQAGADGKTKCVCSAAC---TREYAPVCGSDGNTYNN---------LCL 748
Query: 524 DNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPR 637
+ +C+ + + ++GTC C E + S R
Sbjct: 749 LTAARCQSQTF--IYRAHFGTCGS-TSCAEIKRSGVGR 783
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVC 460
PC KV C+ C G C C + CP S ++VC
Sbjct: 1538 PCSKVKCAFYGQCVWYYDGRTQCECRRTCP---RSDQLVC 1574
>SB_42141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 29.1 bits (62), Expect = 3.7
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 288 STRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQT 467
ST + KTK+ T T+ ST + + +++ E TA++ T +T + +
Sbjct: 2 STTATQATTKTKEYT--TIK-PSTTDESTTNEASTAEFESTTAAQA--TTKTKEYTSIKP 56
Query: 468 STKPGNRITEVYRHDAYASTTL--ISAVVRNTTTFK 569
S G+ TE Y H A A T + V++T T K
Sbjct: 57 SNTEGSTTTEAYIHSATAEFTFTPTKSWVKSTHTIK 92
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 410 NCIKDCPYETDSRRMVCTNFNETWQSDYRSIPPRCLCLDNSDQCRGPQY 556
N + D P TD R+ CT F T +IPP S QCR Q+
Sbjct: 260 NALFDLP--TDVGRVPCTRFPRTGAGIAAAIPPSRSRPSISTQCRSKQF 306
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +2
Query: 428 PYETDSRRMVCTNFNETWQSDYRSIPPRCLCLDNSDQCRGPQYHHVQIE 574
P T T F ET + I P C + + + R P Y HV +E
Sbjct: 330 PATTPCVATTTTCFKETSVTKTEFIRPTVTCTETTTKIRPPSYDHVHVE 378
>SB_22648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 29.1 bits (62), Expect = 3.7
Identities = 28/97 (28%), Positives = 37/97 (38%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 458
TT ST + T ST + ST ++ +TNT T T S T T T
Sbjct: 2 TTTSTTTSTTNTSTTTSTTTSTTNTSTTTSTTTS-TTNTST---TTSTTTSTTNTSTTTS 57
Query: 459 AQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFK 569
TST + T STT ++ T T+K
Sbjct: 58 TTTSTTNTSTTTSTTTSTTNTSTT--TSTTTTTITYK 92
>SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSD 490
PC++V C VC+ DA C C +C + R C N T+ ++
Sbjct: 276 PCIEVTCDFFAVCQAFGPKDARCICPHNCATYENQR---CGEDNVTYTNE 322
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +3
Query: 414 ASRTVPTRQTPDAWCAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAE 593
AS PT D+ + P + + S TLI + + F SSI E+
Sbjct: 478 ASSAAPTSSRSDSGDYSAAPPPLPERRMLNSTNTPTSPTLIVTHAKISLKFSSSIAEKLA 537
Query: 594 KCLTALKARCLTS 632
K +TA+ A C+++
Sbjct: 538 KDVTAILAFCVSN 550
>SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004)
Length = 445
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 306 KRMKTKKSTWKTLA*KSTAAQDVSAKST-----NTETPCVTASRTVPTRQTPDAWCAQTS 470
K +K KK K LA +S + A + + P TA +T PT TP A T+
Sbjct: 155 KPVKVKKEVNKALAMESAGFMNALATAAVAAPRKRKRPATTAQKT-PTATTPTTPTASTA 213
Query: 471 TKP 479
KP
Sbjct: 214 VKP 216
>SB_38061| Best HMM Match : DUF995 (HMM E-Value=4)
Length = 220
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 171 SEQLGRGDISEAEHIEHGMSESLDEKRYMRQK*PELTTFSTRSLMKRMKTKK 326
S G +++E EH E SE D+K + K + + R L KR++ KK
Sbjct: 115 SSDSGNSEVTEQEHDEDANSEENDDKPTRKTKLDK----AQRKLNKRLRQKK 162
>SB_28129| Best HMM Match : HR1 (HMM E-Value=6.7)
Length = 228
Score = 27.9 bits (59), Expect = 8.6
Identities = 31/112 (27%), Positives = 49/112 (43%)
Frame = +3
Query: 276 LTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 455
LT STR + + TK ++ TLA +D S PC + R +++ AW
Sbjct: 89 LTAISTRQIYHKANTKHTSIHTLA-PVGPRRDAS----TVYYPCSSKERK-RIKKSRLAW 142
Query: 456 CAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTAL 611
+T ++ N + Y ST L+ V+N + + I+ER C T L
Sbjct: 143 -DRTRSEEQNGNHTYGLPNRYGSTRLLRKAVKNPESPSTDISERI--CCTTL 191
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,031,148
Number of Sequences: 59808
Number of extensions: 444032
Number of successful extensions: 1534
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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