Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00106
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 105 4e-23
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 105 4e-23
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 42 4e-04
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 35 0.050
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 35 0.050
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 32 0.35
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 32 0.47
AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical ... 30 1.4
Z79694-3|CAB01962.3| 594|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 29 2.5
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 29 2.5
AY387697-1|AAR26326.1| 594|Caenorhabditis elegans SOL-1 protein. 29 2.5
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 29 2.5
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 4.4
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 4.4
AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormo... 29 4.4
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 29 4.4
AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical... 28 5.8
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z48716-2|CAA88597.2| 169|Caenorhabditis elegans Hypothetical pr... 28 7.6
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 105 bits (251), Expect = 4e-23
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDYRSIPPRCL 517
PC C G+ C + + G+ C CI CP + D VC N N+T+ S RCL
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCL 111
Query: 518 CLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERREL 694
C S +C V +EY G C+++ +CTE M+ FP RM DWLF +M+++ +RREL
Sbjct: 112 CKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 105 bits (251), Expect = 4e-23
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDYRSIPPRCL 517
PC C G+ C + + G+ C CI CP + D VC N N+T+ S RCL
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCL 111
Query: 518 CLDNSDQCRGPQYHHVQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERREL 694
C S +C V +EY G C+++ +CTE M+ FP RM DWLF +M+++ +RREL
Sbjct: 112 CKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 41.9 bits (94), Expect = 4e-04
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 449
T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 450 AWCAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLT 629
+ S+ P N I Y + STT + ++ +TTT + S + + + T
Sbjct: 369 I-TSTLSSLPDNAICS-YLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTT 426
Query: 630 SPVACGTGFLTSCAT 674
P T S +T
Sbjct: 427 EPTTTLTTSTASTST 441
Score = 32.7 bits (71), Expect = 0.27
Identities = 25/103 (24%), Positives = 43/103 (41%)
Frame = +3
Query: 357 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRITEVYRHDAYASTTLI 536
+ + + +T T T VT++ TVPT + TST + T + ++T
Sbjct: 273 STSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTAS 332
Query: 537 SAVVRNTTTFKSSITERAEKCLTALKARCLTSPVACGTGFLTS 665
++ +TT +SS T + T L T+ T L+S
Sbjct: 333 TSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPEITSTLSS 375
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 41.9 bits (94), Expect = 4e-04
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 449
T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 450 AWCAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLT 629
+ S+ P N I Y + STT + ++ +TTT + S + + + T
Sbjct: 369 I-TSTLSSLPDNAICS-YLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTT 426
Query: 630 SPVACGTGFLTSCAT 674
P T S +T
Sbjct: 427 EPTTTLTTSTASTST 441
Score = 32.7 bits (71), Expect = 0.27
Identities = 25/103 (24%), Positives = 43/103 (41%)
Frame = +3
Query: 357 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRITEVYRHDAYASTTLI 536
+ + + +T T T VT++ TVPT + TST + T + ++T
Sbjct: 273 STSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTAS 332
Query: 537 SAVVRNTTTFKSSITERAEKCLTALKARCLTSPVACGTGFLTS 665
++ +TT +SS T + T L T+ T L+S
Sbjct: 333 TSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPEITSTLSS 375
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 35.1 bits (77), Expect = 0.050
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = +2
Query: 350 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDYRSIPPRC---L 517
K C C + E+ A C C DCP YE + + VC T+ S+ C
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574
Query: 518 CLDNSDQCRGPQYHHVQIEYYGTCR 592
+ + + + + HVQ Y CR
Sbjct: 575 FVMTAFEGKCDECLHVQCRYGEECR 599
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSD 490
PC K+ C C + A C C C D R VC ET+ ++
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNE 415
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 35.1 bits (77), Expect = 0.050
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = +2
Query: 350 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDYRSIPPRC---L 517
K C C + E+ A C C DCP YE + + VC T+ S+ C
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582
Query: 518 CLDNSDQCRGPQYHHVQIEYYGTCR 592
+ + + + + HVQ Y CR
Sbjct: 583 FVMTAFEGKCDECLHVQCRYGEECR 607
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSD 490
PC K+ C C + A C C C D R VC ET+ ++
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRC---EDVMRPVCATNGETFDNE 423
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 32.7 bits (71), Expect = 0.27
Identities = 30/132 (22%), Positives = 44/132 (33%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 458
TT +T + T+ +T T +T +T T T T + T PT T +
Sbjct: 93 TTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTT 152
Query: 459 AQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLTSPV 638
T+T T +T + TTT + T A T T+P
Sbjct: 153 TPTTTTT-TPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPT 211
Query: 639 ACGTGFLTSCAT 674
T T+ T
Sbjct: 212 TTTTVPTTTTTT 223
Score = 29.9 bits (64), Expect = 1.9
Identities = 31/124 (25%), Positives = 44/124 (35%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 458
TT +T + T +T T +T + ++T T T T + T PT TP
Sbjct: 73 TTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPT---TETTTTPTTTTPTT-- 127
Query: 459 AQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLTSPV 638
T+T P TE +TT + TTT + T T T+P
Sbjct: 128 --TTTTPTTTTTETTTTPT--TTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPT 183
Query: 639 ACGT 650
T
Sbjct: 184 TTTT 187
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/129 (21%), Positives = 42/129 (32%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 458
TT +T + T +T T +T +A +T T TP T + T P
Sbjct: 163 TTTTTPTTTTTTPTTTTTTPTTT-TTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTT 221
Query: 459 AQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLTSPV 638
+T T +TT + TTT + T + T T+P
Sbjct: 222 TTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPT 281
Query: 639 ACGTGFLTS 665
T T+
Sbjct: 282 TTTTPTTTT 290
Score = 29.5 bits (63), Expect = 2.5
Identities = 36/150 (24%), Positives = 48/150 (32%), Gaps = 7/150 (4%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCV----TASRTVP--TRQ 440
TT +T T T T +T + T T TP T + T P T
Sbjct: 72 TTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTT-TPTTETTTTPTTTTPTTTTT 130
Query: 441 TPDAWCAQTSTKPGNRITEVYRHDAYASTT-LISAVVRNTTTFKSSITERAEKCLTALKA 617
TP +T+T P TE +TT + TTT + T T
Sbjct: 131 TPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPT 190
Query: 618 RCLTSPVACGTGFLTSCATWLNVES*PLIT 707
T+P T T+ T + P T
Sbjct: 191 TTTTAPTTTTTTPTTTTTTPTTTTTVPTTT 220
Score = 29.5 bits (63), Expect = 2.5
Identities = 29/134 (21%), Positives = 41/134 (30%), Gaps = 2/134 (1%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQT--PDA 452
TT T + T T T +T + ++T T T T + T PT T P
Sbjct: 104 TTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTT 163
Query: 453 WCAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLTS 632
+T T +T + TTT + T T + T+
Sbjct: 164 TTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTT 223
Query: 633 PVACGTGFLTSCAT 674
P T T T
Sbjct: 224 PTTTTTTTTTPTTT 237
Score = 29.5 bits (63), Expect = 2.5
Identities = 30/133 (22%), Positives = 46/133 (34%), Gaps = 1/133 (0%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPD-AW 455
T +T + T +T T +T A + + T T T + TVPT T
Sbjct: 167 TPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTT 226
Query: 456 CAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLTSP 635
T+T P T A+TT + TTT +++ T+P
Sbjct: 227 TTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTP 286
Query: 636 VACGTGFLTSCAT 674
T T+ +T
Sbjct: 287 TTTTTTAKTTKST 299
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/108 (23%), Positives = 34/108 (31%)
Frame = +3
Query: 384 STNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTT 563
ST T T T + T T T T+T P +TT + TTT
Sbjct: 71 STTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTT 130
Query: 564 FKSSITERAEKCLTALKARCLTSPVACGTGFLTSCATWLNVES*PLIT 707
++ T T T+P T T+ T + P T
Sbjct: 131 TPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTT 178
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 32.3 bits (70), Expect = 0.35
Identities = 33/118 (27%), Positives = 49/118 (41%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 458
TT ST S + T K T T +T + +T T TP T + T PT T ++
Sbjct: 249 TTVSTTSTVT---TTKPTTTTTTPTTTTTTPTTTTTTPTTTP--TTTTTTPTTTTTES-- 301
Query: 459 AQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLTS 632
T+T+ + T A +TT S TTT ++ T+ TA + T+
Sbjct: 302 --TTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTI-TTTTQTTTPTTTATTTKPTTT 356
Score = 32.3 bits (70), Expect = 0.35
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 7/101 (6%)
Frame = +3
Query: 354 STAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRITEVYRHDAYASTTL 533
+T+ + +T T TP T + T TP T+T P TE + ++TT
Sbjct: 253 TTSTVTTTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTP 312
Query: 534 ISAVVR-------NTTTFKSSITERAEKCLTALKARCLTSP 635
+ +TTTFK++ + T T P
Sbjct: 313 TTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKP 353
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 31.9 bits (69), Expect = 0.47
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 455
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 196 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 255
Query: 456 CAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSIT 581
T T P T + T + + TT KS+ T
Sbjct: 256 MKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPT 297
Score = 31.9 bits (69), Expect = 0.47
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 455
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 310 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 369
Query: 456 CAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSIT 581
T T P T + T + + TT KS+ T
Sbjct: 370 MKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPT 411
Score = 31.5 bits (68), Expect = 0.62
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 458
TT +T + MK T +T T+ KST + KST T T ++ PT T
Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 318
Query: 459 AQTSTKP 479
T T P
Sbjct: 319 KSTPTTP 325
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +3
Query: 285 FSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQ 464
++T+ MK+ +T T+ KST + KST T T ++ PT T
Sbjct: 149 WATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS 206
Query: 465 TSTKP 479
T T P
Sbjct: 207 TPTTP 211
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 458
TT +T + MK T +T K+ +T + KST T T ++ PT T
Sbjct: 274 TTPTTPTTMKSTPTTPTTMKSTP--TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 331
Query: 459 AQTSTKP 479
T T P
Sbjct: 332 KSTPTTP 338
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 279 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQT 443
TT +T + MK T +T T+ KST + KST T T ++ PT T
Sbjct: 375 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 427
>AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical
protein Y18H1A.3 protein.
Length = 1258
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 351 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRITEVYRHDA 515
+ +A VS K + ++PC SRTV R D + KP +T R +A
Sbjct: 876 RQSAIISVSRKDFHAKSPCEITSRTVVGRHIWDLDTHEDVRKPATNVTNWLRKEA 930
>Z79694-3|CAB01962.3| 594|Caenorhabditis elegans Hypothetical
protein C15A11.3 protein.
Length = 594
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 419 KDCPYETDSRRMVCTNFNETWQSDYRSIPPRCLCLDNSDQCRGPQYHHVQIEYYGTCREM 598
K+C + +S TN + W ++Y + PR L + R Q H+ EY+
Sbjct: 433 KECRFSFNSSEH--TN-GKLWSANYPGLYPRNLYCEYIFHGRNDQVVHIHFEYF-DIEGF 488
Query: 599 PDCTESEMSDF 631
C E+ SD+
Sbjct: 489 NQCDETTQSDY 499
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 434 ETDSRRMVCTNF-NETWQSDYRSIPPRCLCLDNSDQC 541
E+D +R C F ET D PP+C CLD +C
Sbjct: 656 ESDKQR--CAAFPEETCSDDSNLCPPKCSCLDRVVRC 690
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 359 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVC 460
CS G C G+ MC C D Y S C
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTC 248
>AY387697-1|AAR26326.1| 594|Caenorhabditis elegans SOL-1 protein.
Length = 594
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 419 KDCPYETDSRRMVCTNFNETWQSDYRSIPPRCLCLDNSDQCRGPQYHHVQIEYYGTCREM 598
K+C + +S TN + W ++Y + PR L + R Q H+ EY+
Sbjct: 433 KECRFSFNSSEH--TN-GKLWSANYPGLYPRNLYCEYIFHGRNDQVVHIHFEYF-DIEGF 488
Query: 599 PDCTESEMSDF 631
C E+ SD+
Sbjct: 489 NQCDETTQSDY 499
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 434 ETDSRRMVCTNF-NETWQSDYRSIPPRCLCLDNSDQC 541
E+D +R C F ET D PP+C CLD +C
Sbjct: 656 ESDKQR--CAAFPEETCSDDSNLCPPKCSCLDRVVRC 690
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 28.7 bits (61), Expect = 4.4
Identities = 31/115 (26%), Positives = 45/115 (39%)
Frame = +3
Query: 291 TRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTS 470
T S + + T ST ++ + S+ + ST T T T PT T A TS
Sbjct: 202 TASTTEEIDTSSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTT----IASTS 257
Query: 471 TKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLTSP 635
T +T + STT+ S V TT + T A T+ + T+P
Sbjct: 258 T-----VTSIV-----TSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTP 302
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 28.7 bits (61), Expect = 4.4
Identities = 31/115 (26%), Positives = 45/115 (39%)
Frame = +3
Query: 291 TRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTS 470
T S + + T ST ++ + S+ + ST T T T PT T A TS
Sbjct: 184 TASTTEEIDTSSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTT----IASTS 239
Query: 471 TKPGNRITEVYRHDAYASTTLISAVVRNTTTFKSSITERAEKCLTALKARCLTSP 635
T +T + STT+ S V TT + T A T+ + T+P
Sbjct: 240 T-----VTSIV-----TSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTP 284
>AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 270 protein.
Length = 399
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -3
Query: 191 PAAELLRRWTFSSRGAD--PAVPTPHTLASAVQMTAI 87
P +++ RRW +SRG P+ + H+L ++ M A+
Sbjct: 15 PLSKISRRWNLNSRGGAIVPSSTSVHSLGHSISMLAV 51
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 28.7 bits (61), Expect = 4.4
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 174 EQLGRGDISEAEHIEHGMSESLDEKRYMRQK*PELTTFSTRSLMKRMKT-KKSTWKTLA* 350
E++ + D E + G E+ ++K + +K P+ F +S T KKS K
Sbjct: 171 EEIAKED-DEGIDEDDGDEETPEQKTTIPKKKPK-NAFGGKSKKNNWGTRKKSKAKVSQV 228
Query: 351 KSTAAQDVSAKSTNTETPCVTASRTVPT 434
+ST+++ +S K P T R PT
Sbjct: 229 QSTSSEKISKKDQENARPRETKLRNTPT 256
>AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical
protein C15F1.1 protein.
Length = 360
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -3
Query: 200 RDVPAAELLRRWTFSSRGADPAVPTPHTLASAVQMTAITRANARRP 63
RD+P +L+R WT R A TL +Q R N P
Sbjct: 315 RDLPVHDLVREWTLLDRSTLQARLNMETLTHGMQEHTFIRYNKIEP 360
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/98 (24%), Positives = 35/98 (35%)
Frame = +3
Query: 270 PELTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPD 449
P TT + + T + T +T + +T+T T T + T T TP
Sbjct: 32 PTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTT---TTTPTTTTTTTPT 88
Query: 450 AWCAQTSTKPGNRITEVYRHDAYASTTLISAVVRNTTT 563
+ TST T +TT +A TTT
Sbjct: 89 TTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTT 126
>Z48716-2|CAA88597.2| 169|Caenorhabditis elegans Hypothetical
protein F59B10.3 protein.
Length = 169
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 650 WLFNIMRDMAERRELTPHY 706
WLFN +D ++REL HY
Sbjct: 115 WLFNRSKDKQQKRELYEHY 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,682,171
Number of Sequences: 27780
Number of extensions: 318431
Number of successful extensions: 1152
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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