Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00104
         (727 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VII5 Cluster: CG31676-PA; n=1; Drosophila melanogaste...    55   2e-06
UniRef50_Q7Q8G7 Cluster: ENSANGP00000013239; n=2; Culicidae|Rep:...    53   8e-06
UniRef50_Q9VII3 Cluster: CG9335-PA; n=2; Sophophora|Rep: CG9335-...    42   0.012
UniRef50_UPI0000513075 Cluster: PREDICTED: similar to CG17218-PA...    42   0.016
UniRef50_UPI0000D56DAF Cluster: PREDICTED: similar to CG9335-PA;...    38   0.25 
UniRef50_Q5CTC3 Cluster: Putative uncharacterized protein; n=3; ...    36   1.3  
UniRef50_UPI0000E4880D Cluster: PREDICTED: hypothetical protein;...    34   3.1  
UniRef50_Q4R3H8 Cluster: Testis cDNA clone: QtsA-16849, similar ...    34   4.1  
UniRef50_A6CW84 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_Q0MTF2 Cluster: Salivary protein MYS2; n=2; Triatominae...    33   7.2  
UniRef50_Q3LVX8 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_Q9VII5 Cluster: CG31676-PA; n=1; Drosophila
           melanogaster|Rep: CG31676-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 159

 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
 Frame = +3

Query: 228 RQECWSYLS--YLTASKSV-----CKKEKKYIDGELVVSRGCTWKRQDDFEVGCPTSRNE 386
           +Q  WSY++  Y   +KSV     CKK  + + G+ V+SR C ++  DD    C   +  
Sbjct: 54  QQRYWSYVNCTYSVGAKSVNARPVCKKLVQEVYGKRVISRSCFYEDMDDSADKCANDQTS 113

Query: 387 ANEVNLFCQTCDYDGCNGAA 446
           +    ++C+TC  DGCNGA+
Sbjct: 114 SYIKTVYCRTCTTDGCNGAS 133


>UniRef50_Q7Q8G7 Cluster: ENSANGP00000013239; n=2; Culicidae|Rep:
           ENSANGP00000013239 - Anopheles gambiae str. PEST
          Length = 129

 Score = 52.8 bits (121), Expect = 8e-06
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
 Frame = +3

Query: 228 RQECWSYL--SYLTAS----KSVCKKEKKYIDGELVVSRGCTWKRQDDFEVGCPTSRNEA 389
           +Q  WSY+  SY   +    + VCKK K+ I+  +VVSR C ++  +     C  ++  +
Sbjct: 30  QQRRWSYVDCSYPPQANQQTRPVCKKMKQIINDRVVVSRSCAYEDVNTPPNSCLNAQTPS 89

Query: 390 NEVNLFCQTCDYDGCNGAATIG 455
                FC+TC  DGCNGAA  G
Sbjct: 90  YIKTEFCETCITDGCNGAAQYG 111


>UniRef50_Q9VII3 Cluster: CG9335-PA; n=2; Sophophora|Rep: CG9335-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 166

 Score = 42.3 bits (95), Expect = 0.012
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +3

Query: 270 KSVCKKEKKYIDGELVVSRGCTWKRQDDFEVGCPTSRNEANEVNLFCQTCDYDGCNGA 443
           ++VC+K  +  +G+L+  R C +  + D    C  +  E N   +FC+ C  D CNGA
Sbjct: 85  RAVCRKTVEENNGKLITKRFCYYTNKSDPVELCNITSPEKNVRRIFCEDCLTDRCNGA 142


>UniRef50_UPI0000513075 Cluster: PREDICTED: similar to CG17218-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG17218-PA, isoform A - Apis mellifera
          Length = 152

 Score = 41.9 bits (94), Expect = 0.016
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +1

Query: 124 VNCWACSSNVNPLCNDPFNIRIDTGNSYLFRLENCD 231
           + CW C+SN NPLC DP N+   T +  +F ++ C+
Sbjct: 24  LQCWDCASNTNPLCGDPMNV---TDHHGIFHVKTCE 56



 Score = 36.7 bits (81), Expect = 0.58
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +3

Query: 267 SKSVCKKEKKYIDGELVVSRGCTWKRQDDFE-VGCPTSRNEANEVNLF-CQTCDYDGCNG 440
           S+ +C+K  K  +GE VV R C+    D+ + V  P S    +  NL  C  C  D CN 
Sbjct: 63  SRKICRKIVKRENGERVVIRQCSTPNVDEADIVDGPCSATAISTRNLIECYICSTDLCNS 122

Query: 441 AATIGRT 461
           A  +  T
Sbjct: 123 AMGVSVT 129


>UniRef50_UPI0000D56DAF Cluster: PREDICTED: similar to CG9335-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG9335-PA - Tribolium castaneum
          Length = 156

 Score = 37.9 bits (84), Expect = 0.25
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +3

Query: 231 QECWSYLSYLTASKSVCKKEKKYID-GELVVSRGCTWKRQDDFEVGCPTSRNEANEVNLF 407
           ++C + L  +   K +C K    +  G+ +++R C     +     CP    E N    F
Sbjct: 68  RQCENNLGQIYNQKPMCVKRIINVPYGKKIITRECKSVSMNQAVGTCP----EKNSNIEF 123

Query: 408 CQTCDYDGCNGAA 446
           C+ CD+DGCN AA
Sbjct: 124 CEYCDFDGCNHAA 136


>UniRef50_Q5CTC3 Cluster: Putative uncharacterized protein; n=3;
            Cryptosporidium|Rep: Putative uncharacterized protein -
            Cryptosporidium parvum Iowa II
          Length = 6579

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -3

Query: 179  LKGSLHSGFTLDEHAQQFTGSLSFTNSARSKTGTRNDSFAIMMHNKLTR 33
            L+   H+ + L++H Q F G L+ T+S +      N+S+ I +  K  R
Sbjct: 3922 LRDQYHNNYYLEDHEQHFNGFLNITSSTKKLGDENNNSYIINLEEKNDR 3970


>UniRef50_UPI0000E4880D Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 124

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +3

Query: 246 YLSYLTASKSVCKKEKKYIDGELVVSRGCTWKRQDDFEVGCPTSRNEANEVNLFCQTCDY 425
           Y++      S+C K+     GE + +RGCT  R+ D + GC     +    N  C++C +
Sbjct: 41  YITECDDYTSLCFKQTITHYGESMYARGCT-SRKSDCQPGC-----QGEPDNQLCESCCF 94

Query: 426 DG-CNGAATI 452
              CN +AT+
Sbjct: 95  SNLCNRSATV 104


>UniRef50_Q4R3H8 Cluster: Testis cDNA clone: QtsA-16849, similar to
           human zinc finger protein 177 (ZNF177),; n=4;
           Eutheria|Rep: Testis cDNA clone: QtsA-16849, similar to
           human zinc finger protein 177 (ZNF177), - Macaca
           fascicularis (Crab eating macaque) (Cynomolgus monkey)
          Length = 481

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 197 PVSIRILKGSLHSGFTLDEHAQQFTGSLSFTNSARSKTG 81
           P+S+    GS+  G   +EH + FT  LS  N  R+ TG
Sbjct: 242 PLSVHRKTGSVEEGLECNEHEKTFTDPLSLQNCVRTHTG 280


>UniRef50_A6CW84 Cluster: Putative uncharacterized protein; n=1;
           Vibrio shilonii AK1|Rep: Putative uncharacterized
           protein - Vibrio shilonii AK1
          Length = 345

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = -2

Query: 264 LSNRKGSSSILVAVFEAEQIRIPGVDTDIKRIVAQRIHVRRTRPTIHWFTVLHE*RKKQN 85
           L   K   S+ VAV  AE  +  G D D  R+++Q +    T  T+H    L   RK+QN
Sbjct: 189 LKEWKNEPSVQVAVELAELYKAIGQDHDSIRVLSQGLEAHPTSATLHHSLALTYWRKQQN 248


>UniRef50_Q0MTF2 Cluster: Salivary protein MYS2; n=2;
           Triatominae|Rep: Salivary protein MYS2 - Triatoma
           brasiliensis
          Length = 176

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +3

Query: 405 FCQTCDYDGCNGAATI 452
           FC+TCD D CNGA++I
Sbjct: 141 FCETCDKDSCNGASSI 156


>UniRef50_Q3LVX8 Cluster: Putative uncharacterized protein; n=1;
           Bigelowiella natans|Rep: Putative uncharacterized
           protein - Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 1031

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 18/63 (28%), Positives = 34/63 (53%)
 Frame = +3

Query: 534 LNFVSNKTLKIKIVHITNLTLLT*SAV*KNSSYLNLIEANHLQNHQSPKSQLTLELFRYI 713
           +N +S K  K    H+++L++L      KN +Y++    NH   ++S K+ LTL+  + +
Sbjct: 21  INMISYKQFKNNSFHLSSLSIL------KNKNYIDTTSKNHTFTNKSIKNALTLKKLKSL 74

Query: 714 NTL 722
             L
Sbjct: 75  PVL 77


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,759,701
Number of Sequences: 1657284
Number of extensions: 11374144
Number of successful extensions: 27376
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27373
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)