Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00103
         (722 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           29   0.034
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           29   0.034
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.96 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   6.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.9  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 29.5 bits (63), Expect = 0.034
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 346 NPESCPKLPNPESWC-PNPESCPKLPNPESRPSHRTQSHDRNYRIQGCD 203
           NPE  P  P    +  P+P  C K P      +H  Q +D +  + GCD
Sbjct: 66  NPEHKPPGPKDLVYLEPSPPFCEKNPKLGILGTHGRQCNDTSIGVDGCD 114


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 29.5 bits (63), Expect = 0.034
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 346 NPESCPKLPNPESWC-PNPESCPKLPNPESRPSHRTQSHDRNYRIQGCD 203
           NPE  P  P    +  P+P  C K P      +H  Q +D +  + GCD
Sbjct: 67  NPEHKPPGPKDLVYLEPSPPFCEKNPKLGILGTHGRQCNDTSIGVDGCD 115


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -3

Query: 330 RSYRIQSRGVQIQNRARSFRIRSHVQATEPRVTTETIESR 211
           R Y +    + +    R+FR+RS V+ +E R+  + I  R
Sbjct: 491 RKYAMLKLKIVLSTILRNFRVRSDVKESEFRLQADIILKR 530


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
 Frame = -2

Query: 370 PNPESWCPNPESCPKLPNPESWCPNPESCPKLPNP--ESRPSHRTQS 236
           P P        S P LP P S    P+S  + PN    S PS  T++
Sbjct: 639 PLPPKRIRKMPSMPLLPRPISCHTTPDSFIEAPNKTLPSLPSTLTKN 685


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 352 CPNPESCPKLPNPE 311
           CP   +CP  PNP+
Sbjct: 213 CPPTLACPLNPNPQ 226



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 304 CPNPESCPKLPNPE 263
           CP   +CP  PNP+
Sbjct: 213 CPPTLACPLNPNPQ 226


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = -3

Query: 573 PPNEVAMPSRPFSILSSSIPWSLNWKYPLRV 481
           PP       RP   +  S   +  WK P R+
Sbjct: 131 PPGRFFCEVRPIKRVKDSTNCNCGWKNPSRI 161


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,639
Number of Sequences: 438
Number of extensions: 4294
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)