Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00102
(686 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 142 1e-32
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 133 3e-30
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 128 9e-29
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 122 1e-26
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 113 5e-24
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 105 8e-22
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 103 3e-21
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 101 2e-20
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 99 5e-20
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 97 3e-19
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 89 1e-16
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 89 1e-16
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 85 2e-15
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 79 8e-14
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 78 2e-13
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 78 2e-13
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 73 7e-12
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 65 1e-09
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 55 2e-06
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 52 1e-05
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 49 1e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 47 5e-04
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 45 0.002
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 45 0.002
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 42 0.019
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.025
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 40 0.075
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 39 0.13
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 38 0.30
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 37 0.40
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 37 0.40
UniRef50_UPI00006CB684 Cluster: hypothetical protein TTHERM_0044... 36 0.93
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 36 0.93
UniRef50_UPI00015B58EF Cluster: PREDICTED: similar to Chm protei... 35 2.1
UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-... 34 2.8
UniRef50_O66830 Cluster: Uncharacterized protein aq_555; n=1; Aq... 33 4.9
UniRef50_Q58PU2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 33 6.5
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 6.5
UniRef50_Q4T4W6 Cluster: Chromosome undetermined SCAF9520, whole... 33 8.6
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 8.6
UniRef50_Q8MPF3 Cluster: GPI transamidase 8; n=1; Toxoplasma gon... 33 8.6
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 8.6
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 142 bits (343), Expect = 1e-32
Identities = 65/94 (69%), Positives = 78/94 (82%)
Frame = +2
Query: 227 FPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 406
F + ++ +V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84 FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCI 143
Query: 407 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 508
GFT KDS+SQRKTCYAQH+Q++ IR KM II R
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKR 177
Score = 135 bits (327), Expect = 8e-31
Identities = 66/95 (69%), Positives = 77/95 (81%), Gaps = 2/95 (2%)
Frame = +3
Query: 39 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 218
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80
Query: 219 ERSFRKFRLIAEMC--KDVMCSATSTAWTSQPISS 317
ERSFRKF+L+AE +DV+ + A T+ + S
Sbjct: 81 ERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRS 115
Score = 92.7 bits (220), Expect = 8e-18
Identities = 41/58 (70%), Positives = 51/58 (87%)
Frame = +1
Query: 511 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
+T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+PRF++S LMELHG
Sbjct: 179 ITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHG 236
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 133 bits (322), Expect = 3e-30
Identities = 61/94 (64%), Positives = 75/94 (79%)
Frame = +2
Query: 227 FPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 406
F + ++ +VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 407 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 508
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 111 bits (267), Expect = 2e-23
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = +3
Query: 39 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 218
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 219 ERSFRKFRLIAEMCKDVMC 275
E +FRKF+LI E + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 95.1 bits (226), Expect = 1e-18
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = +1
Query: 511 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHG
Sbjct: 176 VQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHG 233
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 128 bits (310), Expect = 9e-29
Identities = 58/95 (61%), Positives = 74/95 (77%)
Frame = +2
Query: 221 KVFPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 400
+ + +I++ +VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+F
Sbjct: 474 QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF 533
Query: 401 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIIT 505
CI FT K +KTCYAQ +Q+R IR+KM EI+T
Sbjct: 534 CIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMT 568
Score = 106 bits (255), Expect = 4e-22
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = +3
Query: 45 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 224
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--Q 474
Query: 225 SFRKFRLIAE 254
++RK RL AE
Sbjct: 475 AYRKIRLRAE 484
Score = 77.4 bits (182), Expect = 3e-13
Identities = 33/57 (57%), Positives = 47/57 (82%)
Frame = +1
Query: 514 TNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG
Sbjct: 572 TSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHG 628
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 122 bits (293), Expect = 1e-26
Identities = 56/97 (57%), Positives = 74/97 (76%)
Frame = +2
Query: 221 KVFPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 400
+VF +I++ V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 401 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRT 511
I FT K ++KT YA+ ++V+AIRKKM +I+T T
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 88.6 bits (210), Expect = 1e-16
Identities = 46/75 (61%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
Frame = +3
Query: 42 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 209
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK-- 73
Query: 210 TDAERSFRKFRLIAE 254
D + FRK +L AE
Sbjct: 74 DDESQVFRKIKLRAE 88
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +1
Query: 559 SIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 681
++A+ I I+P+ +V IRKVKVLK P+ + +KL EL+
Sbjct: 205 TLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELY 245
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 113 bits (271), Expect = 5e-24
Identities = 53/98 (54%), Positives = 71/98 (72%)
Frame = +2
Query: 227 FPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 406
F +I++ VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAI 140
Query: 407 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRTSLT 520
T + +KT YA +Q+RAIR+KM EII R + T
Sbjct: 141 AVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAST 178
Score = 89.8 bits (213), Expect = 5e-17
Identities = 43/77 (55%), Positives = 54/77 (70%)
Frame = +3
Query: 45 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 224
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--H 79
Query: 225 SFRKFRLIAEMCKDVMC 275
+FRK +L + + C
Sbjct: 80 AFRKIKLRVDEVQGKNC 96
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/53 (56%), Positives = 44/53 (83%)
Frame = +1
Query: 526 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F++ L+ LHG
Sbjct: 181 LQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGGLLALHG 233
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 105 bits (253), Expect = 8e-22
Identities = 47/85 (55%), Positives = 66/85 (77%)
Frame = +2
Query: 254 NVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLS 433
+V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S
Sbjct: 92 DVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQ 151
Query: 434 QRKTCYAQHTQVRAIRKKMCEIITR 508
+KT YA+ Q++ IRK M +IT+
Sbjct: 152 IKKTSYAKSAQIKKIRKIMNNLITK 176
Score = 75.8 bits (178), Expect = 9e-13
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +3
Query: 39 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 200
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 103 bits (248), Expect = 3e-21
Identities = 48/95 (50%), Positives = 66/95 (69%)
Frame = +2
Query: 224 VFPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 403
+F + ++ +VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F
Sbjct: 6 IFRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFV 65
Query: 404 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 508
I FT K Q+ YAQ T+++ +R ++ E++ R
Sbjct: 66 IAFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQR 99
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +1
Query: 511 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 681
V +L+ VV KLIPDSI +D I+PL +RKVKVLK+P+ ++ +++ELH
Sbjct: 101 VARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDLGRILELH 157
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 101 bits (241), Expect = 2e-20
Identities = 48/104 (46%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Frame = +2
Query: 221 KVFPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 400
K + ++++ V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 401 CIGFTNKDSL---SQRKTCYAQHTQVRAIRKKMCEIITRTSLTL 523
+ FT K S S TCYA+ +QVRAIR+K+ IT + L
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKL 185
Score = 75.8 bits (178), Expect = 9e-13
Identities = 33/71 (46%), Positives = 51/71 (71%)
Frame = +3
Query: 42 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 221
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+ D +
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81
Query: 222 RSFRKFRLIAE 254
+++RK +L+ +
Sbjct: 82 KAWRKVKLVID 92
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +1
Query: 526 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 681
+ E LI + K IEK I+PL+++ IRKVKVLKRP+ + +K+ EL+
Sbjct: 187 IAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAELY 238
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 99 bits (238), Expect = 5e-20
Identities = 49/78 (62%), Positives = 60/78 (76%)
Frame = +3
Query: 42 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 221
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D E
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQND---E 78
Query: 222 RSFRKFRLIAEMCKDVMC 275
+FRKF+LI E + C
Sbjct: 79 VAFRKFKLITEDVQGKRC 96
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 97.5 bits (232), Expect = 3e-19
Identities = 50/79 (63%), Positives = 60/79 (75%)
Frame = +3
Query: 39 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 218
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQND--- 74
Query: 219 ERSFRKFRLIAEMCKDVMC 275
E +FRKF+LI E + C
Sbjct: 75 EVAFRKFKLITEDVQGKNC 93
Score = 94.7 bits (225), Expect = 2e-18
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = +1
Query: 511 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+FE+ KLMELHG
Sbjct: 123 VQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHG 180
Score = 41.9 bits (94), Expect = 0.014
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +2
Query: 227 FPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 379
F + ++ +VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 78 FRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 88.6 bits (210), Expect = 1e-16
Identities = 35/96 (36%), Positives = 63/96 (65%)
Frame = +2
Query: 221 KVFPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 400
+ + +++ + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 82 EAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLF 141
Query: 401 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 508
+ FT + Q + CYA+ V+ +R ++ ++I R
Sbjct: 142 VVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKR 177
Score = 78.6 bits (185), Expect = 1e-13
Identities = 34/70 (48%), Positives = 47/70 (67%)
Frame = +3
Query: 45 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 224
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 225 SFRKFRLIAE 254
++RK R +
Sbjct: 83 AYRKVRFTVQ 92
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/54 (33%), Positives = 36/54 (66%)
Frame = +1
Query: 523 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
+++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F+ L+ HG
Sbjct: 183 QIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHG 236
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +2
Query: 254 NVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLS 433
+V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT
Sbjct: 89 DVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQ 148
Query: 434 QRKTCYAQHTQVRAIRKKMCEIITR 508
QRKT YAQ +Q++ IRKK+ EI+ +
Sbjct: 149 QRKTTYAQRSQIKDIRKKIVEIVLK 173
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/78 (41%), Positives = 51/78 (65%)
Frame = +3
Query: 42 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 221
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D +
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-Q 77
Query: 222 RSFRKFRLIAEMCKDVMC 275
++RK +LI + + C
Sbjct: 78 MAWRKVKLIIDDVEGTRC 95
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/57 (35%), Positives = 38/57 (66%)
Frame = +1
Query: 511 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 681
V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KRP+ + KL E +
Sbjct: 175 VSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVDAQKLREFY 231
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 85.0 bits (201), Expect = 2e-15
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 541 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHG
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHG 48
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 79.4 bits (187), Expect = 8e-14
Identities = 31/54 (57%), Positives = 46/54 (85%)
Frame = +1
Query: 520 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 681
++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL ELH
Sbjct: 162 TDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPELH 215
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +2
Query: 224 VFPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 403
V + ++ +++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC
Sbjct: 65 VVRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFC 123
Query: 404 IGF-TNKDSLSQRKTCYAQHTQVRAI 478
+G+ TN + R+ AQ+ QV I
Sbjct: 124 VGYTTNVTTRYARQLVCAQYQQVHQI 149
Score = 62.9 bits (146), Expect = 7e-09
Identities = 36/66 (54%), Positives = 43/66 (65%)
Frame = +3
Query: 57 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRK 236
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ D + RK
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQND---KVVVRK 68
Query: 237 FRLIAE 254
F+LI E
Sbjct: 69 FKLITE 74
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/83 (43%), Positives = 53/83 (63%)
Frame = +2
Query: 254 NVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLS 433
+++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T +
Sbjct: 42 DIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGY 101
Query: 434 QRKTCYAQHTQVRAIRKKMCEII 502
+KTCY +H+ + IRK M ++I
Sbjct: 102 VKKTCYVKHSDEKKIRKIMFDVI 124
Score = 38.3 bits (85), Expect = 0.17
Identities = 14/44 (31%), Positives = 31/44 (70%)
Frame = +1
Query: 511 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 642
++ ++++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 128 LSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 77.8 bits (183), Expect = 2e-13
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +2
Query: 227 FPQIQINRRNVQGRNVLC--NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 400
F I N ++++ N C FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F
Sbjct: 75 FSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLF 134
Query: 401 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRTSLTLN 526
I + K + KT Y +Q RA+R+++ +II + + ++
Sbjct: 135 LIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMD 176
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +1
Query: 517 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 642
N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 174 NMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 72.9 bits (171), Expect = 7e-12
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = +2
Query: 263 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 442
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 443 TCYAQHTQVRAIRKKMCEIIT 505
YA + R +R M + +T
Sbjct: 149 HTYANSHKARQVRDVMIKALT 169
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +2
Query: 275 LCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYA 454
L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+
Sbjct: 97 LTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHV 156
Query: 455 QHTQVRAIRKKMCEII 502
+ +R +R + E +
Sbjct: 157 KGRVIRMMRAGIYETL 172
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = +3
Query: 45 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 224
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL +
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLN 79
Query: 225 SFRKFRLIAEMCKDVMC 275
KF L ++ D C
Sbjct: 80 GNTKFYLQTQLVSDGKC 96
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 535 VVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 681
+V KL + + +A I RDV IR+VKV+KRPR + L +H
Sbjct: 184 LVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 54.8 bits (126), Expect = 2e-06
Identities = 34/102 (33%), Positives = 58/102 (56%)
Frame = +2
Query: 233 QIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 412
+ QI+R V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G
Sbjct: 76 KFQIHR--VEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133
Query: 413 TNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRTSLTLNSGRW 538
T + +K+ A+RKKM E + + + L+SG++
Sbjct: 134 TTHRIGTAQKS---------AMRKKMIETLVKKAAELDSGQF 166
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 52.0 bits (119), Expect = 1e-05
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +2
Query: 254 NVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLS 433
NV G + G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K
Sbjct: 72 NVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIK---- 127
Query: 434 QRKTCYAQHTQVRAIRKKMCEIITR 508
A+ +Q++AIR+ M +I+ +
Sbjct: 128 -----RARSSQMQAIREMMVDIVKK 147
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/66 (37%), Positives = 42/66 (63%)
Frame = -1
Query: 215 VSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNL 36
+ + L ISQGN ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V L
Sbjct: 76 ILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCL 135
Query: 35 LLNTFF 18
LL++ F
Sbjct: 136 LLSSLF 141
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +2
Query: 239 QINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTN 418
+INR VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + +
Sbjct: 73 KINR--VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPD 130
Query: 419 KDSLSQRKT 445
+ S KT
Sbjct: 131 RRIKSSIKT 139
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 532 EVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 672
E V +I D +++ K IYP+R + IRK +VL P +I +L+
Sbjct: 160 EYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEKIVELV 206
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/83 (36%), Positives = 45/83 (54%)
Frame = +2
Query: 254 NVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLS 433
+V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 65 DVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------ 118
Query: 434 QRKTCYAQHTQVRAIRKKMCEII 502
T A+ +Q RAIRK+M ++I
Sbjct: 119 ---TRRAKTSQQRAIRKEMFKVI 138
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +1
Query: 607 RDVCIRKVKVLKRPRFEISKLMELHG 684
R +C++KVK+LK+P+FE+ KLMELHG
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHG 88
Score = 41.5 bits (93), Expect = 0.019
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 39 IVDPFTRKDWYDVKAPSMFSKRQVGTT 119
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 41.5 bits (93), Expect = 0.019
Identities = 31/90 (34%), Positives = 46/90 (51%)
Frame = +2
Query: 257 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 436
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT + +
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFT----VRR 131
Query: 437 RKTCYAQHTQVRAIRKKMCEIITRTSLTLN 526
KT +Q RAIR M +I+ + +LN
Sbjct: 132 CKT-----SQKRAIRAIMRQIVVEKASSLN 156
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 41.1 bits (92), Expect = 0.025
Identities = 27/89 (30%), Positives = 47/89 (52%)
Frame = +2
Query: 257 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 436
+ G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 72 IGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK----- 126
Query: 437 RKTCYAQHTQVRAIRKKMCEIITRTSLTL 523
A+ +Q+ +IR+ M ++ + L
Sbjct: 127 ----RARTSQIESIRQIMINVVNKRGAEL 151
Score = 38.3 bits (85), Expect = 0.17
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +3
Query: 42 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 221
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGDWTKQ 61
Query: 222 RSFRKFRL 245
FR+
Sbjct: 62 NIKMIFRI 69
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 39.5 bits (88), Expect = 0.075
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +2
Query: 134 PGNE--NCFGRIEGKSFRSFPG*STS*H*RGKVFPQIQINRRNVQGRNVLCNFHGMDLTT 307
P N+ N GRI S R T+ H K ++ V G N F G D T
Sbjct: 42 PANDPANLIGRISEISLRDL----TNEH--SKHMTRMYFKVDGVSGNNATSQFVGHDTTR 95
Query: 308 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 445
+ L+ V++ ++ I A ++V+T DG+ +RV + T + KT
Sbjct: 96 EYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 38.7 bits (86), Expect = 0.13
Identities = 27/82 (32%), Positives = 41/82 (50%)
Frame = +2
Query: 257 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 436
V+G F G +L D +R + ++ + + +V T DGY LRV + FT
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFT------- 122
Query: 437 RKTCYAQHTQVRAIRKKMCEII 502
R+ C + +Q AIRK M EI+
Sbjct: 123 RQRC--KTSQKSAIRKVMQEIV 142
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 37.5 bits (83), Expect = 0.30
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 439
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV +
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLAL--------- 129
Query: 440 KTCYAQH-TQVRAIRKKMCEIITRTS 514
T Y H Q IRK M +++ +T+
Sbjct: 130 -TAYRVHREQATTIRKIMEDVVKKTA 154
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 37.1 bits (82), Expect = 0.40
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 296 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 442
+LT D LR +V++ + +EA+I V TTD Y +RV + T K + SQ K
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 37.1 bits (82), Expect = 0.40
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 296 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 475
+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 476 IRKKMCEIITRTS 514
IR+ M +++ T+
Sbjct: 134 IRRTMIDLVRETA 146
>UniRef50_UPI00006CB684 Cluster: hypothetical protein
TTHERM_00446420; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00446420 - Tetrahymena
thermophila SB210
Length = 1054
Score = 35.9 bits (79), Expect = 0.93
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +1
Query: 427 LEPTQDVLRPAHSGQSNQKENV*NHYTHVTNSELREVVNKLIPDSIAKDIEKACHGI 597
L+P Q V + GQ+NQ +N N Y ++ N+ RE V +L PDS+ + +K H I
Sbjct: 471 LQPNQAVNKTFSEGQTNQNQNQEN-YQNINNT--REDVGQL-PDSLGQPFQKQFHSI 523
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 35.9 bits (79), Expect = 0.93
Identities = 26/94 (27%), Positives = 48/94 (51%)
Frame = +2
Query: 140 NENCFGRIEGKSFRSFPG*STS*H*RGKVFPQIQINRRNVQGRNVLCNFHGMDLTTDKLR 319
+E+ GRI + + F G T H V + +++ G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNGDFTKMH----VMLRFRVSE--TVGQDALTTFVGHHHQTNHIR 104
Query: 320 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 421
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_UPI00015B58EF Cluster: PREDICTED: similar to Chm protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Chm
protein - Nasonia vitripennis
Length = 593
Score = 34.7 bits (76), Expect = 2.1
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +2
Query: 317 RWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC- 493
R +++ + +E D DGY + F + + N +L+ Y A K C
Sbjct: 218 RMLMQLLTSCLEQGADSPEFDGYRDKTF-VEYLNTKNLTPIVKHYVMQAIAMATDKTSCR 276
Query: 494 EIITRTSLTLNS-GRW*TS*FLTPLPRTSRRPAMASTLCAMF 616
+ + RT LNS GR+ + FL P+ + P LCA+F
Sbjct: 277 DGVNRTKHFLNSLGRYGNTPFLWPMYGSGELPQCFCRLCAVF 318
>UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-PA
- Drosophila melanogaster (Fruit fly)
Length = 332
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/75 (24%), Positives = 40/75 (53%)
Frame = +1
Query: 451 RPAHSGQSNQKENV*NHYTHVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 630
+P S S + N+ + + T+ + VN++ S+ + +A +G+ +R+ ++
Sbjct: 83 KPGSSSSSKETRNI-KQFANETDEDYLRRVNRMTNASVREAHYEAKYGVNVIRNPKTGEI 141
Query: 631 KVLKRPRFEISKLME 675
V KRP+ EI +L++
Sbjct: 142 TVQKRPKNEIDELLK 156
>UniRef50_O66830 Cluster: Uncharacterized protein aq_555; n=1;
Aquifex aeolicus|Rep: Uncharacterized protein aq_555 -
Aquifex aeolicus
Length = 267
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 215 RGKVFPQIQINR-RNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEAN 358
RG P + + R + R V+ H + T ++W K+W+ L+EAN
Sbjct: 136 RGAFRPTNEYKKIRGFKARKVVVESHALGKKTTLIQWYTKEWKELVEAN 184
>UniRef50_Q58PU2 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 479
Score = 33.1 bits (72), Expect = 6.5
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = -3
Query: 603 RVDAMAGLLDVLGNGVRNQLVHHLPEFRVSDVRVMISHIFFLIALT*VCWA*HVLRWLKE 424
RV GL V VR Q+V P+ R R + + F++A V W H L WL +
Sbjct: 59 RVTLYVGLALVWLLKVRPQMVRRWPQIRQRLPRTELLAVLFILATEYVAWLFHHLEWLTQ 118
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 33.1 bits (72), Expect = 6.5
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +2
Query: 221 KVFPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 400
K + +++ NV G F G TTD +R M+++ + I+A+ VKT D +++
Sbjct: 62 KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLH 121
Query: 401 CIGFTNKDSLSQRK 442
+ T + + S ++
Sbjct: 122 VLAVTTRRAKSSQQ 135
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.1 bits (72), Expect = 6.5
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 284 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 442
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q4T4W6 Cluster: Chromosome undetermined SCAF9520, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF9520, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 517
Score = 32.7 bits (71), Expect = 8.6
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2
Query: 346 ESLPFFNHPPELIGCEVHAVEVAEHITSLHISAINLNLRKDLSASVSACRSARETSKTL 170
E PFF+ PEL V A++V I L + +N L KD + AC + S+TL
Sbjct: 67 EGNPFFSEDPELDNLMVKAIQVL-RIHLLELEKVN-ELCKDFCSRYIACLKTKMNSETL 123
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 294 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 419
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q8MPF3 Cluster: GPI transamidase 8; n=1; Toxoplasma
gondii|Rep: GPI transamidase 8 - Toxoplasma gondii
Length = 604
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 174 VFEVSLADLQADTDAERSFRKFRLIAEMCK-DVMCSATSTAWTSQPISSG 320
+ V LAD A A+R FR+ LIAE C+ + A +TA SSG
Sbjct: 241 ISSVDLADAVAQMKAQRRFREMLLIAETCQGSTLLDAMATAGVLGLASSG 290
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 8.6
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 523 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 675
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,717,906
Number of Sequences: 1657284
Number of extensions: 14859133
Number of successful extensions: 44130
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 42432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44120
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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