Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00102
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 141 7e-34
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 141 9e-34
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 141 9e-34
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 141 9e-34
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 135 6e-32
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 114 1e-25
AY051866-1|AAK93290.1| 332|Drosophila melanogaster LD36157p pro... 34 0.16
AE014298-2587|AAF48743.1| 332|Drosophila melanogaster CG8326-PA... 34 0.16
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 141 bits (342), Expect = 7e-34
Identities = 73/130 (56%), Positives = 88/130 (67%)
Frame = +2
Query: 227 FPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 406
F + ++ +VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 407 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRTSLTLNSGRW*TS*FLTPLPRTSRRP 586
GFT KD SQRKTCYAQ +QVR IR +M +IIT + + TS T L + S++
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLLTSWPWTRLRKISKKA 203
Query: 587 AMASTLCAMF 616
A MF
Sbjct: 204 VSAYIHYMMF 213
Score = 127 bits (307), Expect = 1e-29
Identities = 61/82 (74%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Frame = +3
Query: 39 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 218
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 219 ERSFRKFRLIAEMCKD--VMCS 278
ERSFRKFRLIAE +D V+C+
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCN 102
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 141 bits (341), Expect = 9e-34
Identities = 65/93 (69%), Positives = 75/93 (80%)
Frame = +2
Query: 227 FPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 406
F + ++ +VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 407 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIIT 505
GFT KD SQRKTCYAQ +QVR IR +M +IIT
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIIT 176
Score = 127 bits (307), Expect = 1e-29
Identities = 61/82 (74%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Frame = +3
Query: 39 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 218
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 219 ERSFRKFRLIAEMCKD--VMCS 278
ERSFRKFRLIAE +D V+C+
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCN 102
Score = 89.4 bits (212), Expect = 4e-18
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = +1
Query: 511 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELHG
Sbjct: 179 VSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHG 236
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 141 bits (341), Expect = 9e-34
Identities = 65/93 (69%), Positives = 75/93 (80%)
Frame = +2
Query: 227 FPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 406
F + ++ +VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 34 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 93
Query: 407 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIIT 505
GFT KD SQRKTCYAQ +QVR IR +M +IIT
Sbjct: 94 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIIT 126
Score = 89.4 bits (212), Expect = 4e-18
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = +1
Query: 511 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELHG
Sbjct: 129 VSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHG 186
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
Frame = +3
Query: 168 GRVFEVSLADLQADTDAERSFRKFRLIAEMCKD--VMCS 278
GRVFEVSLADLQ D D ERSFRKFRLIAE +D V+C+
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCN 52
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 141 bits (341), Expect = 9e-34
Identities = 65/93 (69%), Positives = 75/93 (80%)
Frame = +2
Query: 227 FPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 406
F + ++ +VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 407 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIIT 505
GFT KD SQRKTCYAQ +QVR IR +M +IIT
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIIT 176
Score = 127 bits (307), Expect = 1e-29
Identities = 61/82 (74%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Frame = +3
Query: 39 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 218
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 219 ERSFRKFRLIAEMCKD--VMCS 278
ERSFRKFRLIAE +D V+C+
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCN 102
Score = 89.4 bits (212), Expect = 4e-18
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = +1
Query: 511 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELHG
Sbjct: 179 VSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHG 236
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 135 bits (326), Expect = 6e-32
Identities = 64/94 (68%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Frame = +2
Query: 227 FPQIQINRRNVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 406
F + ++ +VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 85 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 144
Query: 407 GFTNKDSLSQRKTCYAQHTQVRAIRK-KMCEIIT 505
GFT KD SQRKTCYA +QVR IR +M +IIT
Sbjct: 145 GFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIIT 178
Score = 118 bits (283), Expect = 1e-26
Identities = 58/83 (69%), Positives = 67/83 (80%), Gaps = 3/83 (3%)
Frame = +3
Query: 39 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTD 215
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80
Query: 216 AERSFRKFRLIAEMCKD--VMCS 278
E SFRKFRLIAE +D V+C+
Sbjct: 81 PEHSFRKFRLIAEDVQDRNVLCN 103
Score = 89.4 bits (212), Expect = 4e-18
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = +1
Query: 511 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELHG
Sbjct: 181 VSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHG 238
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 114 bits (274), Expect = 1e-25
Identities = 53/71 (74%), Positives = 59/71 (83%)
Frame = +2
Query: 293 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 472
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 473 AIRKKMCEIIT 505
IR +M +IIT
Sbjct: 61 KIRARMTDIIT 71
Score = 89.4 bits (212), Expect = 4e-18
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = +1
Query: 511 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 684
V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELHG
Sbjct: 74 VSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHG 131
>AY051866-1|AAK93290.1| 332|Drosophila melanogaster LD36157p
protein.
Length = 332
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/75 (24%), Positives = 40/75 (53%)
Frame = +1
Query: 451 RPAHSGQSNQKENV*NHYTHVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 630
+P S S + N+ + + T+ + VN++ S+ + +A +G+ +R+ ++
Sbjct: 83 KPGSSSSSKETRNI-KQFANETDEDYLRRVNRMTNASVREAHYEAKYGVNVIRNPKTGEI 141
Query: 631 KVLKRPRFEISKLME 675
V KRP+ EI +L++
Sbjct: 142 TVQKRPKNEIDELLK 156
>AE014298-2587|AAF48743.1| 332|Drosophila melanogaster CG8326-PA
protein.
Length = 332
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/75 (24%), Positives = 40/75 (53%)
Frame = +1
Query: 451 RPAHSGQSNQKENV*NHYTHVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 630
+P S S + N+ + + T+ + VN++ S+ + +A +G+ +R+ ++
Sbjct: 83 KPGSSSSSKETRNI-KQFANETDEDYLRRVNRMTNASVREAHYEAKYGVNVIRNPKTGEI 141
Query: 631 KVLKRPRFEISKLME 675
V KRP+ EI +L++
Sbjct: 142 TVQKRPKNEIDELLK 156
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,046,115
Number of Sequences: 53049
Number of extensions: 715753
Number of successful extensions: 2104
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2103
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -