Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00096
         (386 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   3.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   3.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   5.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   5.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   5.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   5.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    20   7.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   9.8  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = -1

Query: 365 FLTYIIVY-ATGSSPLVARV*ITCP*CW 285
           F  Y + Y ATG +  V    I CP  W
Sbjct: 268 FQAYYLYYVATGKASFVTVPMIVCPIVW 295


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
 Frame = -1

Query: 365 FLTYIIVY-ATGSSPLVARV*ITCP*CW 285
           F  Y + Y ATG +  V    I CP  W
Sbjct: 268 FQAYYLYYVATGKASFVTVPMIVCPIVW 295


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 383 FFCFYFFLTYIIVYATGSSPL 321
           F+ ++F+L+YI  Y T S  L
Sbjct: 84  FYSYFFYLSYI--YTTYSRKL 102



 Score = 19.8 bits (39), Expect = 9.8
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -1

Query: 380 FCFYFFLTYIIVYA 339
           FCFY+ L  + +++
Sbjct: 326 FCFYWLLVMVAMFS 339


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 383 FFCFYFFLTYIIVYATGSSPL 321
           F+ ++F+L+YI  Y T S  L
Sbjct: 40  FYSYFFYLSYI--YTTYSRKL 58



 Score = 19.8 bits (39), Expect = 9.8
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -1

Query: 380 FCFYFFLTYIIVYA 339
           FCFY+ L  + +++
Sbjct: 282 FCFYWLLVMVAMFS 295


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/23 (39%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = -3

Query: 330 IALG--RTRVDHLPMMLDYLFDE 268
           +ALG  RTR + +P + + ++DE
Sbjct: 42  LALGVERTRSELIPFLTETIYDE 64


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 146 MWVYQTTPGCSTCHELF 96
           MW    T GC+   ELF
Sbjct: 1   MWSNSLTAGCNPDSELF 17


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/19 (42%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
 Frame = +3

Query: 9   RLRPN--SLKKHRRRRKDP 59
           ++RP   S ++HR+  KDP
Sbjct: 252 KMRPKRQSSRRHRKNLKDP 270


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 134 QTTPGCSTCHELF 96
           +TTP  S C +LF
Sbjct: 294 RTTPASSRCGQLF 306


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,039
Number of Sequences: 336
Number of extensions: 1973
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)