Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00095
(634 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 138 5e-34
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 131 9e-32
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 118 9e-28
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 113 2e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 83 4e-17
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 52 7e-08
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 44 2e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.32
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.42
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.74
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 27 1.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 6.9
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 6.9
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 9.1
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 9.1
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 138 bits (335), Expect = 5e-34
Identities = 63/88 (71%), Positives = 73/88 (82%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P IFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYF 507
VL KM+ETAEAYLG V +AV+TVPAYF
Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVPAYF 148
Score = 115 bits (276), Expect = 7e-27
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +2
Query: 74 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Score = 74.5 bits (175), Expect = 1e-14
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +3
Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE 632
+DSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE
Sbjct: 149 NDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGE 190
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 131 bits (316), Expect = 9e-32
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P IFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYF 507
VL KM+E+AEA+LG V +AV+TVPAYF
Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVPAYF 148
Score = 115 bits (276), Expect = 7e-27
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +2
Query: 74 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Score = 71.3 bits (167), Expect = 1e-13
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = +3
Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE 632
+DSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E
Sbjct: 149 NDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHE 190
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 118 bits (283), Expect = 9e-28
Identities = 53/88 (60%), Positives = 67/88 (76%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P+ +FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYF 507
VLTKMKE +EA L K V+ AVITVPAYF
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVPAYF 152
Score = 102 bits (245), Expect = 4e-23
Identities = 46/60 (76%), Positives = 52/60 (86%)
Frame = +2
Query: 74 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Score = 68.9 bits (161), Expect = 6e-13
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +3
Query: 510 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 620
DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K
Sbjct: 154 DSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAK 190
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 113 bits (273), Expect = 2e-26
Identities = 50/88 (56%), Positives = 69/88 (78%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P+ IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYF 507
+L+KMK+TAEAYLGK V +AV+TVPAYF
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYF 181
Score = 100 bits (240), Expect = 2e-22
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP N
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPEN 96
Score = 72.9 bits (171), Expect = 3e-14
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +3
Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGT 626
+D+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T
Sbjct: 182 NDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT 221
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 82.6 bits (195), Expect = 4e-17
Identities = 38/88 (43%), Positives = 55/88 (62%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
P+ F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166
Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYF 507
+L+KM+ETA YLGK V+NAV+TVPAYF
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAYF 194
Score = 76.2 bits (179), Expect = 4e-15
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 65 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 241
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 242 NPNNKY 259
NP N +
Sbjct: 109 NPENTF 114
Score = 69.3 bits (162), Expect = 4e-13
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = +3
Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 620
+DSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK
Sbjct: 195 NDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK 232
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 52.0 bits (119), Expect = 7e-08
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = +2
Query: 62 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 241
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 242 NPNN 253
N N
Sbjct: 63 NFRN 66
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 268 KRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 444
KRL GR ++D ++ + ++ G KV Y E+ F ++ + TK+K
Sbjct: 72 KRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKA 131
Query: 445 TAEAYLGKTVQNAVITVPAYFMTLK 519
AEA L +V + VI++PA+F ++
Sbjct: 132 IAEAELIGSVSDVVISIPAWFTDIQ 156
Score = 41.1 bits (92), Expect = 1e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 510 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 617
D QR+A +A I+GLN LR++N+ AAA+ YG+ K
Sbjct: 154 DIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITK 189
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADN 85
Score = 33.1 bits (72), Expect = 0.034
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 385 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFMTLKDK 525
++K E S L ++ E+AE +LG V V++VP YF + K
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRK 180
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.9 bits (64), Expect = 0.32
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 77 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 253
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFP-- 82
Query: 254 KYSMPNV 274
+S+ NV
Sbjct: 83 AHSIRNV 89
Score = 26.2 bits (55), Expect = 3.9
Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +1
Query: 244 PQQQIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVS 417
P I + K L+ E VQ +P + + + +++ +++ + EE+
Sbjct: 82 PAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEII 141
Query: 418 SMVLTKMKETAEAYLGKTVQNAVITVPAYFMTLK 519
+M + AE + + + V+TVP +F L+
Sbjct: 142 AMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQ 175
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.5 bits (63), Expect = 0.42
Identities = 26/137 (18%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Frame = -3
Query: 614 VKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVMKYAGTVITAFCTVLPR*ASAVSFI 435
V ++ + S+S S ++ + + F S + I++ T+L + S +
Sbjct: 576 VSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSSL 635
Query: 434 FVSTMELTSSGKKVLSSPL-----------YATLILGLPPSLTTSKGQCFMSACTVASSN 288
+S+ + S +LSS + Y++ ++ +L +S +S+ VASS+
Sbjct: 636 MISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSS 695
Query: 287 LRPMRRLASNICCWGSS 237
P+ +S + + +S
Sbjct: 696 SSPIPSSSSLVSTYSAS 712
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.74
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 69 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 164
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 173 PSYVAFTDTERLIGDAAKNQVAMNPNNKYSMPNVSSDVSSKMLLC 307
P +A T ER++ AAK A+N Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 6.9
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 55 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 234
+NGK T +R +S + W P++E R G D + V R + + +EP
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531
Query: 235 GDEPQQ 252
++P++
Sbjct: 532 -EKPEE 536
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 155 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 51
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 384 TLICYLDLRFASITDNLERPVLHVGLHSSIFELTSDETFGI 262
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 218 AAKNQVAMNPNNKYSMPNVSSDVSSKML 301
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,737,500
Number of Sequences: 5004
Number of extensions: 58329
Number of successful extensions: 219
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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