Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00091
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    26   0.32 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   4.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.0  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.2  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 114 SLTATVGPECSLKDSRLSVGGIGESGKVPQSN 19
           SLT  V P     DSR+  G +G  G  P S+
Sbjct: 134 SLTGPVRPAACTPDSRVGYGSVGLVGGDPASS 165


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +1

Query: 85  TLWSHCRC 108
           T+WSHC+C
Sbjct: 147 TVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +1

Query: 85  TLWSHCRC 108
           T+WSHC+C
Sbjct: 147 TVWSHCQC 154


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 146 QEFMEFIVQETNRYAQQLAAE 208
           QEF++   +ET R  + L AE
Sbjct: 140 QEFIQIFNEETKRLVEDLEAE 160


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 146 QEFMEFIVQETNRYAQQLAAE 208
           QEF++   +ET R  + L AE
Sbjct: 140 QEFIQIFNEETKRLVEDLEAE 160


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = -1

Query: 603 CSTNLSTAAAIHLKQCSASLYIIP*TWNSNGYH 505
           C   L+T A   + Q      ++   W+  GYH
Sbjct: 14  CKEKLNTLAISVMNQWPGVRLLVTEGWDEEGYH 46


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 149 EFMEFIVQETNR 184
           E++E +VQETNR
Sbjct: 214 EYLETLVQETNR 225


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 149 EFMEFIVQETNR 184
           E++E +VQETNR
Sbjct: 214 EYLETLVQETNR 225


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 662 TYFVSFYAHCCSFVWNKLVDVQPTF 588
           T+   F+A CC F+   +V++   F
Sbjct: 72  THIFFFFAICCDFIALIVVNIVHVF 96


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 319 IKNRVEEYWNTEQNIFS 369
           ++NR+E+Y     +IFS
Sbjct: 117 VENRIEQYKRENPSIFS 133


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 286 FFGILLAMGIVI 321
           FFG+ LA G+VI
Sbjct: 120 FFGVHLAYGVVI 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,014
Number of Sequences: 336
Number of extensions: 3975
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)