Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00091
(672 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11) 50 2e-06
SB_53723| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_25778| Best HMM Match : COX17 (HMM E-Value=1.1) 48 9e-06
SB_21408| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_30693| Best HMM Match : Protamine_P1 (HMM E-Value=6.3) 47 2e-05
SB_56078| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_50051| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_59640| Best HMM Match : RasGEF (HMM E-Value=0.23) 46 4e-05
SB_11041| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_20906| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_46931| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_19874| Best HMM Match : CBM_X (HMM E-Value=2.2) 43 3e-04
SB_51842| Best HMM Match : YTH (HMM E-Value=1.8) 42 3e-04
SB_7524| Best HMM Match : V-ATPase_G (HMM E-Value=3.2) 41 0.001
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 40 0.002
SB_43915| Best HMM Match : Bombesin (HMM E-Value=4.9) 39 0.003
SB_53293| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_435| Best HMM Match : zf-CCHC (HMM E-Value=2) 38 0.010
SB_52495| Best HMM Match : AT_hook (HMM E-Value=4.6) 37 0.017
SB_31608| Best HMM Match : DUF298 (HMM E-Value=3.9) 37 0.017
SB_51752| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_11954| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_26234| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_1285| Best HMM Match : SET (HMM E-Value=0.011) 35 0.069
SB_15971| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_29524| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_28710| Best HMM Match : Transposase_11 (HMM E-Value=4.9) 33 0.28
SB_59353| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_36747| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_5599| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_49835| Best HMM Match : PKD_channel (HMM E-Value=1.2e-28) 30 2.0
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 2.6
SB_57514| Best HMM Match : EGF_CA (HMM E-Value=2.4e-20) 29 4.5
SB_25490| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_47406| Best HMM Match : RB_A (HMM E-Value=6.4) 28 6.0
SB_37213| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20) 28 6.0
SB_8901| Best HMM Match : UPF0203 (HMM E-Value=3.7) 28 6.0
SB_42189| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_47909| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_19643| Best HMM Match : ACR_tran (HMM E-Value=0.003) 28 7.9
>SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11)
Length = 1170
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/88 (31%), Positives = 47/88 (53%)
Frame = +1
Query: 250 RMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
+ K+ DEL +F G+ L MGI + YW ++ +F G + + RF+ +++ L
Sbjct: 34 KWKDVTPDELRMFLGVALVMGINSLPQQALYW-SQNPLFGNLGIQDVIPKTRFEEIAQFL 92
Query: 430 HFNNSENLRNLNLDPSQAKLFKVEPVIA 513
HF++S N D +LFKV PV++
Sbjct: 93 HFSDSNNEPQRG-DADYDRLFKVRPVLS 119
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 534 ELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
+ Y ++I++DE L+ +KG L Q++P K GIK +
Sbjct: 127 QTYEPSKDISVDEGLIAFKGRLGFRQYMPAKPTKYGIKVW 166
>SB_53723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/88 (30%), Positives = 46/88 (52%)
Frame = +1
Query: 250 RMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
+ K+ DEL +F G+ L MGI + YW ++ +F G + + RF+ +++ L
Sbjct: 131 KWKDVTPDELRMFLGVALVMGINSLPQQALYW-SQNPLFGNLGIQDVIPKTRFEEIAQFL 189
Query: 430 HFNNSENLRNLNLDPSQAKLFKVEPVIA 513
HF++ N D +LFKV PV++
Sbjct: 190 HFSDPNNEPQRG-DADYDRLFKVRPVLS 216
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 534 ELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
+ Y ++I++DE ++ +KG L Q++P K GIK +
Sbjct: 224 QAYKPSKDISVDEGMIAFKGRLCFRQYMPAKPTKYGIKVW 263
>SB_25778| Best HMM Match : COX17 (HMM E-Value=1.1)
Length = 567
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/88 (30%), Positives = 46/88 (52%)
Frame = +1
Query: 250 RMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
+ K+ DEL +F G+ L MGI + YW ++ +F G + + RF+ +++ L
Sbjct: 131 KWKDVTPDELRMFLGVALVMGINSLPQQALYW-SQNPLFGNLGIQDVIPKTRFEEIAQFL 189
Query: 430 HFNNSENLRNLNLDPSQAKLFKVEPVIA 513
HF++ N D +LFKV PV++
Sbjct: 190 HFSDPNNEPQRG-DADYDRLFKVRPVLS 216
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 534 ELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
+ Y ++I++DE ++ +KG L Q++P K GIK +
Sbjct: 224 QAYEPSKDISVDEGMIAFKGRLGFRQYMPAKPTKYGIKVW 263
>SB_21408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/88 (30%), Positives = 46/88 (52%)
Frame = +1
Query: 250 RMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
+ K+ DEL +F G+ L MGI + YW ++ +F G + + RF+ +++ L
Sbjct: 94 KWKDVTPDELRMFLGVALVMGINSLPQQALYW-SQNPLFGNLGIQDVIPKTRFEEIAQFL 152
Query: 430 HFNNSENLRNLNLDPSQAKLFKVEPVIA 513
HF++ N D +LFKV PV++
Sbjct: 153 HFSDPNNEPQRG-DADYDRLFKVRPVLS 179
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 534 ELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
+ Y ++I++DE + +KG L Q++P K GIK +
Sbjct: 187 QAYEPSKDISVDEGTIAFKGRLGFRQYMPAKPTKYGIKVW 226
>SB_30693| Best HMM Match : Protamine_P1 (HMM E-Value=6.3)
Length = 250
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +1
Query: 208 NVGRRGITGLQ*DYRMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKV 387
N R+G G + K DE+ FFG+ +AMGIV + YW + + + P F
Sbjct: 139 NAERKGAKGTS-GGQWKPITQDEMKAFFGLNIAMGIVKLPEAKMYWQKKIWLLTVPSFSQ 197
Query: 388 YMSLRRFQLLSRCLHFNNSENL 453
MS RF + + +H ++ N+
Sbjct: 198 VMSRNRFFQILQYIHVSDDSNI 219
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 122 EIFRLIWDQEFMEFIVQETNRYAQQLAAEMLDGGE 226
E F L +DQE + +V TN A++ A+ GG+
Sbjct: 118 EYFELFFDQEVWDCLVTMTNLNAERKGAKGTSGGQ 152
>SB_56078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +3
Query: 540 YIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICES 668
Y+ +N+A+DE+++++KG L I Q++PNK GIK +E +S
Sbjct: 62 YLTTKNVAVDEAMIKYKGRLGIRQYMPNKPIKRGIKVWECADS 104
>SB_50051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/88 (29%), Positives = 46/88 (52%)
Frame = +1
Query: 250 RMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
+ K+ DEL +F G+ L +GI + YW ++ +F G + + RF+ +++ L
Sbjct: 131 KWKDVTPDELRMFLGVALVIGINSLPQQALYW-SQNPLFGNLGIQDVIPKTRFEAIAQFL 189
Query: 430 HFNNSENLRNLNLDPSQAKLFKVEPVIA 513
HF++ N D +LFKV PV++
Sbjct: 190 HFSDLNNEPQRG-DADYDRLFKVRPVLS 216
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 534 ELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
+ Y ++I++DE ++ +KG L Q++P K GIK +
Sbjct: 224 QAYEPSKDISVDEGMIAFKGRLGFRQYMPAKPTKYGIKVW 263
>SB_59640| Best HMM Match : RasGEF (HMM E-Value=0.23)
Length = 299
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +1
Query: 250 RMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
+ K+ DEL +F G+ L MGI + YW ++ +F G + + RF+ +++ L
Sbjct: 123 KWKDVTPDELHMFLGVALVMGINSLPQQALYW-SQNALFGNLGIQDVIPKTRFEEIAQFL 181
Query: 430 HFNNSENLRNLNLDPSQAKLFKVEPVIA 513
HF+N N + D LFKV V++
Sbjct: 182 HFSNPNN-ELQHRDADYDSLFKVRTVLS 208
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 534 ELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
+ Y ++ ++DE ++ +KG L Q++P K GIK +
Sbjct: 216 QAYEPSKDKSVDEGMIAFKGRLCFRQYMPAKPMKYGIKVW 255
>SB_11041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +3
Query: 540 YIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICES 668
Y+ +N+ALDE+++++KG L + Q++PNK GIK +E +S
Sbjct: 136 YLPTKNVALDEAMIKYKGRLGMKQYMPNKPIKRGIKVWECTDS 178
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +1
Query: 262 TNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFNN 441
T +E+ F G+ + GI V+ YW ++ + P + M RF+ LS+ LH N+
Sbjct: 45 TTAEEMKAFLGLHIVFGIKKLPSVQLYW-SKNPLLGVPEVQKRMQKGRFEKLSQYLHLND 103
Query: 442 SENLRNLNLDPSQAKLFKVEPVI 510
+P KL KV PV+
Sbjct: 104 KSTALPRE-NPQHDKLHKVRPVV 125
>SB_20906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/40 (42%), Positives = 30/40 (75%)
Frame = +3
Query: 540 YIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEI 659
Y+ +N+A+DE+++++KG L I Q++PNK GIKT ++
Sbjct: 50 YLPMKNVAIDEAMIKYKGRLGIKQYMPNKPIKRGIKTNDV 89
>SB_46931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/88 (29%), Positives = 46/88 (52%)
Frame = +1
Query: 250 RMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
+ K+ DEL +F G+ L MGI + YW ++ +F G + + RF+ +++ L
Sbjct: 10 KWKDVTPDELHMFLGVALVMGINSLPQQALYW-SQNALFGNLGIQDVIPKTRFEEIAQFL 68
Query: 430 HFNNSENLRNLNLDPSQAKLFKVEPVIA 513
HF++ N + D +LFKV V++
Sbjct: 69 HFSDPNN-ELQHGDADYDRLFKVRTVLS 95
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 534 ELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
+ Y ++ ++DE ++ +KG L Q++P K GIK +
Sbjct: 103 QAYEPSKDKSVDERMIAFKGRLCFRQYMPAKPMKYGIKVW 142
>SB_19874| Best HMM Match : CBM_X (HMM E-Value=2.2)
Length = 725
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/89 (29%), Positives = 39/89 (43%)
Frame = +1
Query: 244 DYRMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSR 423
D + T DEL +FGI GI+ YW ++ S K M R+ +++
Sbjct: 129 DPKWYATTKDELCAYFGIRFLQGIISVPSERHYW-SKNEFLSVKKIKDVMPRDRYLKITQ 187
Query: 424 CLHFNNSENLRNLNLDPSQAKLFKVEPVI 510
LH+NNS + P KL + P+I
Sbjct: 188 YLHYNNSATAKPRG-HPEHDKLHLIRPLI 215
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 516 LNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
L F Y + A+DE L+++KG L Q++P K GIK +
Sbjct: 218 LGESFLVQYKPNRENAIDEGLVKFKGRLAYKQYMPMKPVKRGIKVW 263
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 77 FKEHSGPTV---AVSDPYEIFRLIWDQEFMEFIVQETNRYAQQ 196
F E GPT A + + F+L++ E + IV ETNR A Q
Sbjct: 80 FTEDIGPTAQLPAEAGALDFFKLLFTDEILGEIVLETNRNAAQ 122
>SB_51842| Best HMM Match : YTH (HMM E-Value=1.8)
Length = 244
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +1
Query: 253 MKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLH 432
+K V+EL F GI + MGIV +++YW+ + P + RF + R LH
Sbjct: 128 IKPLTVEELKAFLGITIMMGIVKLPSMKDYWSESEPFLYRPNIARPIVRDRFFAILRYLH 187
Query: 433 FNNSENLRNLNLDPSQAKLFKVEPVI 510
+N L ++ KL+K +P +
Sbjct: 188 L--CDNTTALARGSAEFKLYKAKPFL 211
>SB_7524| Best HMM Match : V-ATPase_G (HMM E-Value=3.2)
Length = 492
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +1
Query: 244 DYRMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSR 423
D + T DEL +FGI GI YW ++ S K M R+ +++
Sbjct: 317 DPKWYATTKDELCAYFGIRFLQGIKSVPSERHYW-SKNEFLSVKKIKDVMPRDRYLKITQ 375
Query: 424 CLHFNNSENLRNLNLDPSQAKLFKVEPVI 510
LH+NNS + P KL + P+I
Sbjct: 376 YLHYNNSATAKPRG-HPEHDKLHLIRPLI 403
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 516 LNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
L F Y + A+DE L+++KG L Q++P K GIK +
Sbjct: 406 LGESFLVQYKPNRENAIDEGLVKFKGRLAYKQYMPMKPVKRGIKVW 451
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 77 FKEHSGPTV---AVSDPYEIFRLIWDQEFMEFIVQETNRYAQQ 196
F E GPT A + + F+L++ E E IV ETNR A Q
Sbjct: 268 FTEDIGPTAQLPAEAGALDFFKLLFTDEIPEEIVLETNRNAAQ 310
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/106 (31%), Positives = 48/106 (45%)
Frame = +3
Query: 336 RVLEYGTKHLLHSRFQSIYVA*EVPVTQQVLTF**FRELEKPQPGSLTGKAF*SGACDSH 515
R+L+ G K + + Q V +V Q L F E KP+ K F
Sbjct: 542 RLLQ-GIKSVPGEKHQGCNVKEQVRKINQYLHFN-DAEKAKPRGHEEHDKLFHVRPLIKR 599
Query: 516 LNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
L+ F E Y + A+DE L+++KG L Q++P K A GIK +
Sbjct: 600 LSETFLEAYKPNRENAIDEGLIKYKGRLGFKQYMPLKPAKRGIKVW 645
>SB_43915| Best HMM Match : Bombesin (HMM E-Value=4.9)
Length = 485
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +3
Query: 447 ELEKPQPGSLTGKAF*SGACDSHLNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNK 626
E KP+ K F L+ F E Y + A+DE L+++KG L Q++P K
Sbjct: 377 EKAKPRGHEEHDKLFHVRPLIKRLSETFLEAYKPNRENAIDEGLIKYKGRLGFKQYMPLK 436
Query: 627 AAAVGIKTY 653
A GIK +
Sbjct: 437 PAKRGIKVW 445
>SB_53293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +3
Query: 516 LNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNK 626
L F+E Y+ QN+++DE+++++KG L Q++P K
Sbjct: 319 LEKSFSEHYLPSQNVSIDEAMVKYKGRLGFKQYMPIK 355
>SB_435| Best HMM Match : zf-CCHC (HMM E-Value=2)
Length = 913
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/47 (29%), Positives = 30/47 (63%)
Frame = +3
Query: 528 FTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICES 668
F + K +++DE+++++KG L+ Q++P K GIK + +C++
Sbjct: 551 FEAYFATKGELSIDEAMIKYKGRLSFVQYMPMKPTKRGIKVFCLCDA 597
>SB_52495| Best HMM Match : AT_hook (HMM E-Value=4.6)
Length = 183
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +1
Query: 244 DYRMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSR 423
D KE + +EL F GI++ MGIV V +YW E + RF + R
Sbjct: 32 DGTAKELSAEELRAFLGIVIMMGIVKLPSVRDYW-CEDPYLHQGEIAKRIPRDRFLAILR 90
Query: 424 CLHFNNSE 447
LH N+E
Sbjct: 91 YLHIANNE 98
>SB_31608| Best HMM Match : DUF298 (HMM E-Value=3.9)
Length = 203
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +1
Query: 244 DYRMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSR 423
D KE + +EL F GI++ MGIV V +YW E + RF + R
Sbjct: 52 DGTAKELSAEELRAFLGIVIMMGIVKLPSVRDYW-CEDPYLHQGEIAKRIPRDRFLAILR 110
Query: 424 CLHFNNSE 447
LH N+E
Sbjct: 111 YLHIANNE 118
>SB_51752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +1
Query: 244 DYRMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSR 423
D KE + +EL F GI++ MGIV V +YW E + RF + R
Sbjct: 32 DGTAKELSAEELRAFLGIVIMMGIVKLPSVRDYW-CEDPYLHQGEIAKRIPRDRFLAILR 90
Query: 424 CLHFNNSE 447
LH N+E
Sbjct: 91 YLHIANNE 98
>SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1924
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +3
Query: 537 LYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICES 668
L +M +++DE+++++KG L+ ++P K GIK + +CES
Sbjct: 1568 LVMMGIRLSIDEAMIKYKGRLSFVYYMPMKPVKRGIKVFCLCES 1611
>SB_11954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +3
Query: 519 NSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICESQ 671
N+ E+ +NI++DE ++++KG L Q++P K GIK + +++
Sbjct: 8 NTIVKEVVFDPENISVDEGMIKFKGRLAFRQYMPAKPTKYGIKNWMAADAR 58
>SB_26234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 368
Score = 35.1 bits (77), Expect = 0.052
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 253 MKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLH 432
+K V+EL F GI + MGIV ++YW+ + P + RF + R LH
Sbjct: 122 IKPLTVEELKTFLGITIMMGIVKLPSKKDYWSESEPFLYQPNIARPIVRDRFFAILRYLH 181
>SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 513 HLNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICES 668
H + LY QN+A+DE +++ K + Q+I NK G+K + + +S
Sbjct: 286 HFKERCKALYQPFQNVAIDEKMVKSKHRSGMRQYIKNKPTKWGLKLWVLADS 337
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 259 ETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFN 438
+TN +E+ ++L G+V + YWNT + ++ + M+ RF+ L LH
Sbjct: 208 DTNPEEINRLIALILYCGLVNVSSFHRYWNT-KTLYHGLWARAIMARDRFKALMAMLHVV 266
Query: 439 N 441
N
Sbjct: 267 N 267
>SB_1285| Best HMM Match : SET (HMM E-Value=0.011)
Length = 829
Score = 34.7 bits (76), Expect = 0.069
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 513 HLNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICES 668
H + LY QN+A+DE +++ K + Q+I NK G+K + + +S
Sbjct: 286 HFKERCKALYQPFQNVAIDERMVKSKHRSGMRQYIKNKPTKWGLKLWVLADS 337
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 259 ETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFN 438
+TN +E+ ++L G+V + YWNT + ++ + M+ RF+ L LH
Sbjct: 208 DTNPEEINRLIALILYCGLVNVSSFHRYWNT-KTLYHGLWARAIMARDRFKALMAMLHVV 266
Query: 439 N 441
N
Sbjct: 267 N 267
>SB_15971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 34.7 bits (76), Expect = 0.069
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +1
Query: 307 MGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFNNSENLRNLNLDPSQAK 486
MGI + YW+ + +F G + + RF+ +++ LHF+N N + D +
Sbjct: 1 MGINSLPQQALYWS-QNPLFGNLGIQDVIPKTRFEEIAQFLHFSNPNN-KPQRGDADYDR 58
Query: 487 LFKVEPVIA 513
LFKV PV++
Sbjct: 59 LFKVRPVLS 67
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +3
Query: 534 ELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICESQ 671
+ Y ++ ++DE ++ +KG L Q++P K GIK + +++
Sbjct: 75 QAYEPSKDKSVDEGMIAFKGRLGFRQYMPAKPTKYGIKVWMAADAK 120
>SB_29524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 534 ELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
+ Y ++I++DE ++ +KG L Q++P K GIK +
Sbjct: 75 QAYEPSKDISVDEGMIAFKGRLGFRQYMPAKPTKYGIKVW 114
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +1
Query: 307 MGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFNNSENLRNLNLDPSQAK 486
MGI + YW+ + +F G + + RF+ +++ LHF++ N D +
Sbjct: 1 MGINSLPQQALYWS-QNPLFGNLGIQDVIPKTRFEEIAQFLHFSDPNNEPQRG-DADYDR 58
Query: 487 LFKVEPVIA 513
LFKV V++
Sbjct: 59 LFKVRLVLS 67
>SB_28710| Best HMM Match : Transposase_11 (HMM E-Value=4.9)
Length = 302
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 576 LLQWKGWLNINQFIPNKAAAVGIKTYEICESQ 671
++ W+G L+ QFI NK GIK + + +S+
Sbjct: 1 MIPWRGRLSFRQFIANKPVRFGIKVWVLADSE 32
>SB_59353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 116 PYEIFRLIWDQEFMEFIVQETNRYAQQL-AAEMLDGGELQASSRI 247
P F L ++ E +E IV ETN+YA Q E D G + +RI
Sbjct: 76 PLSFFELFFNSEVIELIVTETNKYAVQCNPDEFDDEGRRKLRTRI 120
>SB_36747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 516 LNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
L F Y + A+DE L+++KG L Q++P K GIK +
Sbjct: 80 LGESFLVQYKPNRENAIDEGLVKFKGRLAYKQYMPMKPVKRGIKVW 125
>SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 832
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 244 DYRMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSR 423
D KE + E F GI++ MGIV V +YW + + K + RF + R
Sbjct: 397 DGTAKELSAKEFRAFLGIVIMMGIVKLPSVRDYWCGDPYLHQGEMAK-RIPRDRFLAILR 455
Query: 424 CLHFNNSE 447
+H N++
Sbjct: 456 YIHIANNK 463
>SB_5599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 259 ETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFN 438
+TN +E+ ++L G+V + YWNT + ++ + M+ RF+ L LH
Sbjct: 55 DTNPEEINRLIALILYCGLVNVSSFHRYWNT-KTLYHGLWARAIMARDRFKALMAMLHVV 113
Query: 439 N 441
N
Sbjct: 114 N 114
>SB_49835| Best HMM Match : PKD_channel (HMM E-Value=1.2e-28)
Length = 1075
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +2
Query: 350 RNKTSSPLQVSKYICRLGGSSYSA-----GAYILIIPRT*ETSTWI 472
+ KTS PL S Y+ GG Y+A + L + +T E +TWI
Sbjct: 781 KRKTSWPLLFSTYVSSYGGGGYAAELGQTEEHALRVIKTLENNTWI 826
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 331 VEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFNNSE 447
VEE+ NTE T GF L +++ + CLH+ NS+
Sbjct: 323 VEEWANTELAA-DTLGFSAEEKLSMYKICAACLHWGNSK 360
>SB_57514| Best HMM Match : EGF_CA (HMM E-Value=2.4e-20)
Length = 337
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 128 FRLIWDQEFMEFIVQETNRYAQQ 196
F ++D E + IV ETNRYA+Q
Sbjct: 274 FSTVFDDEVLARIVTETNRYAKQ 296
>SB_25490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 115 VTYSDSGTRVFLKRFTPFCWRYRRVRESSPVKFKKMTR 2
+T++D T V K TPF + YR +R +K + R
Sbjct: 88 LTWNDHVTEVTKKASTPFAFHYREIRIHFSQNYKHLRR 125
>SB_47406| Best HMM Match : RB_A (HMM E-Value=6.4)
Length = 289
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 443 ELLKCKHLLSNWNLLSDIYTLKPGVEKMFCSVFQYSSTRFFMTI 312
EL K LLS+ N++S Y+L+ G E+M S + F+T+
Sbjct: 243 ELEPIKRLLSSGNIVSHGYSLRSGTERMDWSRAKTERFSTFLTM 286
>SB_37213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 552 QNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
++++++E ++ +KG L Q++P K GIK +
Sbjct: 86 KDMSVNEGMIAFKGRLGFRQYMPAKPTKYGIKVW 119
>SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20)
Length = 1037
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -3
Query: 130 KNLVRVTYSDSGTRVFLKRFTPFCWRYRRVRESSPVKFKKM 8
+ L+ + +++ +F K F PFC + + + ES V++ M
Sbjct: 567 QRLIEDSINNNAVMIFSKSFCPFCKKVKAIFESINVQYTAM 607
>SB_8901| Best HMM Match : UPF0203 (HMM E-Value=3.7)
Length = 602
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 89 SGPTVAVSDPYEIFRLIWDQEFMEFIVQETNRYAQQLAA 205
+G T+ ++ Y++F+ +WD+ + +QE N L A
Sbjct: 179 AGETLQDTNRYDVFKTLWDKHCAKPGIQERNAIGHDLPA 217
>SB_42189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 122 EIFRLIWDQEFMEFIVQETNRYAQQLAAEMLD 217
+ F L++ E + I ETNRYAQ + + D
Sbjct: 131 DYFSLMFSDELIGLISDETNRYAQFIIGQKAD 162
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 250 RMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFK 384
+ K+ DEL +F G+ L MGI + YW ++ +F G +
Sbjct: 169 KWKDVTPDELRMFLGVALVMGINSLPQQALYW-SQNPLFGNLGIQ 212
>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 122 EIFRLIWDQEFMEFIVQETNRYAQQLAAEMLD 217
+ F L++ E + I ETNRYAQ + + D
Sbjct: 1875 DYFSLMFSDELIGLISDETNRYAQFIIGQKAD 1906
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 250 RMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFK 384
+ K+ DEL +F G+ L MGI + YW ++ +F G +
Sbjct: 1913 KWKDVTPDELRMFLGVALVMGINSLPQQALYW-SQNPLFGNLGIQ 1956
>SB_47909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 534 ELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTY 653
+ Y ++ ++DE ++ +KG L Q++P K GIK +
Sbjct: 127 QAYGPSKDKSVDEGMIAFKGRLCFRQYMPAKPMKYGIKVW 166
>SB_19643| Best HMM Match : ACR_tran (HMM E-Value=0.003)
Length = 285
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 280 LVFFGILLAMGIVIKNRVEEYWNTEQNI 363
L FG++LA+GIV+ + + N E+NI
Sbjct: 201 LSLFGLVLAIGIVVDDAIVVVENVERNI 228
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,139,279
Number of Sequences: 59808
Number of extensions: 463320
Number of successful extensions: 1119
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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