Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00091
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130441-1|AAI30442.1| 585|Homo sapiens piggyBac transposable e... 65 2e-10
AK057200-1|BAB71379.1| 581|Homo sapiens DR1) mRNA. protein. 65 2e-10
D88259-1|BAB46919.1| 809|Homo sapiens cerebral protein-4 protein. 34 0.53
BC128585-1|AAI28586.1| 809|Homo sapiens piggyBac transposable e... 34 0.53
BC069033-1|AAH69033.1| 548|Homo sapiens PGBD1 protein protein. 34 0.53
AL021997-3|CAD21704.2| 809|Homo sapiens piggyBac transposable e... 34 0.53
AK223446-1|BAD97166.1| 809|Homo sapiens piggyBac transposable e... 34 0.53
AK094816-1|BAC04428.1| 332|Homo sapiens protein ( Homo sapiens ... 33 0.93
BC063785-1|AAH63785.1| 592|Homo sapiens piggyBac transposable e... 33 1.2
AL672183-3|CAI18712.1| 592|Homo sapiens piggyBac transposable e... 33 1.2
>BC130441-1|AAI30442.1| 585|Homo sapiens piggyBac transposable
element derived 4 protein.
Length = 585
Score = 65.3 bits (152), Expect = 2e-10
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = +1
Query: 250 RMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
+ K+T+ DEL VFF ++L GIV K +E +W+T + + TP + M+ RF LL RCL
Sbjct: 146 KWKDTDNDELKVFFAVMLLQGIVQKPELEMFWST-RPLLDTPYLRQIMTGERFLLLFRCL 204
Query: 430 HFNNSENLRNLNLDPSQAKLFKVEPV 507
HF N+ ++ + +Q L K++PV
Sbjct: 205 HFVNNSSI-SAGQSKAQISLQKIKPV 229
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3
Query: 516 LNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICESQ 671
L +KF+ +Y +NIA+DESL+ +KG L + Q++P K G+K Y +CESQ
Sbjct: 233 LVNKFSTVYTPNRNIAVDESLMLFKGPLAMKQYLPTKRVRFGLKLYVLCESQ 284
>AK057200-1|BAB71379.1| 581|Homo sapiens DR1) mRNA. protein.
Length = 581
Score = 65.3 bits (152), Expect = 2e-10
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = +1
Query: 250 RMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
+ K+T+ DEL VFF ++L GIV K +E +W+T + + TP + M+ RF LL RCL
Sbjct: 146 KWKDTDNDELKVFFAVMLLQGIVQKPELEMFWST-RPLLDTPYLRQIMTGERFLLLFRCL 204
Query: 430 HFNNSENLRNLNLDPSQAKLFKVEPV 507
HF N+ ++ + +Q L K++PV
Sbjct: 205 HFVNNSSI-SAGQSKAQISLQKIKPV 229
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3
Query: 516 LNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICESQ 671
L +KF+ +Y +NIA+DESL+ +KG L + Q++P K G+K Y +CESQ
Sbjct: 233 LVNKFSTVYTPNRNIAVDESLMLFKGPLAMKQYLPTKRVRFGLKLYVLCESQ 284
>D88259-1|BAB46919.1| 809|Homo sapiens cerebral protein-4 protein.
Length = 809
Score = 33.9 bits (74), Expect = 0.53
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 113 DPYEIFRLIWDQEFMEFIVQETNRYAQQ 196
+P E+F L +D E IV ETN YA Q
Sbjct: 418 NPVELFELFFDDETFNLIVNETNNYASQ 445
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 259 ETNVDELLVFFGILLAMGIVIKNRVEEYW---NTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
E V E+ FG+LL G + R E YW +T+QN+ + + RF+L+ L
Sbjct: 451 EVTVQEMRCVFGVLLLSGFMRHPRREMYWEVSDTDQNL-----VRDAIRRDRFELIFSNL 505
Query: 430 HFNNSENL 453
HF ++ +L
Sbjct: 506 HFADNGHL 513
>BC128585-1|AAI28586.1| 809|Homo sapiens piggyBac transposable
element derived 1 protein.
Length = 809
Score = 33.9 bits (74), Expect = 0.53
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 113 DPYEIFRLIWDQEFMEFIVQETNRYAQQ 196
+P E+F L +D E IV ETN YA Q
Sbjct: 418 NPVELFELFFDDETFNLIVNETNNYASQ 445
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 259 ETNVDELLVFFGILLAMGIVIKNRVEEYW---NTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
E V E+ FG+LL G + R E YW +T+QN+ + + RF+L+ L
Sbjct: 451 EVTVQEMRCVFGVLLLSGFMRHPRREMYWEVSDTDQNL-----VRDAIRRDRFELIFSNL 505
Query: 430 HFNNSENL 453
HF ++ +L
Sbjct: 506 HFADNGHL 513
>BC069033-1|AAH69033.1| 548|Homo sapiens PGBD1 protein protein.
Length = 548
Score = 33.9 bits (74), Expect = 0.53
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 113 DPYEIFRLIWDQEFMEFIVQETNRYAQQ 196
+P E+F L +D E IV ETN YA Q
Sbjct: 418 NPVELFELFFDDETFNLIVNETNNYASQ 445
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 259 ETNVDELLVFFGILLAMGIVIKNRVEEYW---NTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
E V E+ FG+LL G + R E YW +T+QN+ + + RF+L+ L
Sbjct: 451 EVTVQEMRCVFGVLLLSGFMRHPRREMYWEVSDTDQNL-----VRDAIRRDRFELIFSNL 505
Query: 430 HFNNSENL 453
HF ++ +L
Sbjct: 506 HFADNGHL 513
>AL021997-3|CAD21704.2| 809|Homo sapiens piggyBac transposable
element derived 1 protein.
Length = 809
Score = 33.9 bits (74), Expect = 0.53
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 113 DPYEIFRLIWDQEFMEFIVQETNRYAQQ 196
+P E+F L +D E IV ETN YA Q
Sbjct: 418 NPVELFELFFDDETFNLIVNETNNYASQ 445
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 259 ETNVDELLVFFGILLAMGIVIKNRVEEYW---NTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
E V E+ FG+LL G + R E YW +T+QN+ + + RF+L+ L
Sbjct: 451 EVTVQEMRCVFGVLLLSGFMRHPRREMYWEVSDTDQNL-----VRDAIRRDRFELIFSNL 505
Query: 430 HFNNSENL 453
HF ++ +L
Sbjct: 506 HFADNGHL 513
>AK223446-1|BAD97166.1| 809|Homo sapiens piggyBac transposable
element derived 1 variant protein.
Length = 809
Score = 33.9 bits (74), Expect = 0.53
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 113 DPYEIFRLIWDQEFMEFIVQETNRYAQQ 196
+P E+F L +D E IV ETN YA Q
Sbjct: 418 NPVELFELFFDDETFNLIVNETNNYASQ 445
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 259 ETNVDELLVFFGILLAMGIVIKNRVEEYW---NTEQNIFSTPGFKVYMSLRRFQLLSRCL 429
E V E+ FG+LL G + R E YW +T+QN+ + + RF+L+ L
Sbjct: 451 EVTVQEMRCVFGVLLLSGFMRHPRREMYWEVSDTDQNL-----VRDAVRRDRFELIFSNL 505
Query: 430 HFNNSENL 453
HF ++ +L
Sbjct: 506 HFADNGHL 513
>AK094816-1|BAC04428.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ37497 fis, clone BRAWH2015853. ).
Length = 332
Score = 33.1 bits (72), Expect = 0.93
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 585 WKGWLNINQFIPNKAAAVGIKTYEICESQ 671
+KG L + Q++P K G+K Y +CESQ
Sbjct: 3 FKGPLAMKQYLPTKRVRFGLKLYVLCESQ 31
>BC063785-1|AAH63785.1| 592|Homo sapiens piggyBac transposable
element derived 2 protein.
Length = 592
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 116 PYEIFRLIWDQEFMEFIVQETNRYAQQ 196
P +F L +D+ + FIV ETNRYA Q
Sbjct: 141 PVGLFELFFDEGTINFIVNETNRYAWQ 167
>AL672183-3|CAI18712.1| 592|Homo sapiens piggyBac transposable
element derived 2 protein.
Length = 592
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 116 PYEIFRLIWDQEFMEFIVQETNRYAQQ 196
P +F L +D+ + FIV ETNRYA Q
Sbjct: 141 PVGLFELFFDEGTINFIVNETNRYAWQ 167
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,211,669
Number of Sequences: 237096
Number of extensions: 2450075
Number of successful extensions: 5598
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5596
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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