Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00091
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069639-1|AAL39784.1|  622|Drosophila melanogaster LD40589p pro...    36   0.038
AE014297-823|AAF54293.1|  622|Drosophila melanogaster CG9839-PA ...    36   0.038

>AY069639-1|AAL39784.1|  622|Drosophila melanogaster LD40589p
           protein.
          Length = 622

 Score = 36.3 bits (80), Expect = 0.038
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = +1

Query: 244 DYRMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSR 423
           + +   T  +E+ +F  + L M  +    + +YW+T    +   GF   + L R+Q L  
Sbjct: 169 ELKSNPTTAEEMEIFMALSLLMCDLKLEHLSDYWSTNM-FYGLVGFSGKIPLERYQQLLH 227

Query: 424 CLHFN 438
           CL+F+
Sbjct: 228 CLNFD 232



 Score = 35.5 bits (78), Expect = 0.066
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 516 LNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNK 626
           +N +  E+YI  Q + L+E +  WKG L     +PNK
Sbjct: 252 INERMEEIYICGQQLVLNEPITLWKGALRYQDELPNK 288


>AE014297-823|AAF54293.1|  622|Drosophila melanogaster CG9839-PA
           protein.
          Length = 622

 Score = 36.3 bits (80), Expect = 0.038
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = +1

Query: 244 DYRMKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSR 423
           + +   T  +E+ +F  + L M  +    + +YW+T    +   GF   + L R+Q L  
Sbjct: 169 ELKSNPTTAEEMEIFMALSLLMCDLKLEHLSDYWSTNM-FYGLVGFSGKIPLERYQQLLH 227

Query: 424 CLHFN 438
           CL+F+
Sbjct: 228 CLNFD 232



 Score = 35.5 bits (78), Expect = 0.066
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 516 LNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNK 626
           +N +  E+YI  Q + L+E +  WKG L     +PNK
Sbjct: 252 INERMEEIYICGQQLVLNEPITLWKGALRYQDELPNK 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,461,482
Number of Sequences: 53049
Number of extensions: 719733
Number of successful extensions: 1562
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)