Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00091
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81083-5|CAB54248.1|  493|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z73976-4|CAA98287.2|  965|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81589-2|CAB04724.1|  728|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AL021481-7|CAA16331.3|  629|Caenorhabditis elegans Hypothetical ...    28   6.9  
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ...    28   6.9  
Z93397-8|CAB07716.2|  545|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AL132904-27|CAC35854.1|  545|Caenorhabditis elegans Hypothetical...    27   9.2  

>Z81083-5|CAB54248.1|  493|Caenorhabditis elegans Hypothetical
           protein F44F1.6a protein.
          Length = 493

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
 Frame = -2

Query: 449 FSELLKCKHLLSNWNLLSDI--YTLKPGV---EKMFCSVFQYSSTRFFMTIPIASNIPKN 285
           +S+ L  + +    NL SDI  YT  P     E+++C    Y   RF      A   P+N
Sbjct: 275 YSKALDARVIHCTNNLTSDIEQYTFNPDTNAFEQVYCKELVYDPNRFNRASLAAYVFPEN 334

Query: 284 TNNSSTLV 261
             N+ T++
Sbjct: 335 VANNGTVI 342


>Z73976-4|CAA98287.2|  965|Caenorhabditis elegans Hypothetical
           protein T07C12.8 protein.
          Length = 965

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 352 PYSSTLQPGSL*RFPSPVIFRRTPITRLHWF 260
           P  + L PG+L   P+P+  RR+P+   H++
Sbjct: 498 PSENILPPGTLPSNPAPIDVRRSPVASSHFY 528


>Z81589-2|CAB04724.1|  728|Caenorhabditis elegans Hypothetical
           protein T08G5.2 protein.
          Length = 728

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 395 DIYTLKPGVEKMFCSVFQYSSTRFFMTIPI---ASNIPKNTNNSSTLVSF 255
           D Y++  G+ K FC  +Q+ +T+FF+   +    ++ P   N +S ++ F
Sbjct: 475 DSYSI--GIIKTFCDFYQFVTTKFFLPCSLILEGTSTPCTDNATSIILDF 522


>AL021481-7|CAA16331.3|  629|Caenorhabditis elegans Hypothetical
           protein Y43F4B.2 protein.
          Length = 629

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 337 EYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFNNSENLRNL 462
           ++WN  + + +   F    S ++F  L R  H N+ +NLR +
Sbjct: 525 DFWNCRERVRNGLEFTNNPSEQQFSKLKRMYHHNDYQNLRGV 566


>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
            protein Y20F4.4 protein.
          Length = 1319

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 337  EYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFNNSENLRNL 462
            ++WN  + + +   F    S ++F  L R  H N+ +NLR +
Sbjct: 1065 DFWNCRERVRNGLEFTNNPSEQQFSKLKRMYHHNDYQNLRGV 1106


>Z93397-8|CAB07716.2|  545|Caenorhabditis elegans Hypothetical
           protein ZC482.2 protein.
          Length = 545

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 509 ITGSTLKSFACEGSRLRFLKFSELLKCKHLLSNWNLLS 396
           I    LK   C+G ++      E  KCK L S  NL++
Sbjct: 199 IVRGNLKDCGCDGEKVNVSNVKEYSKCKTLDSGLNLVN 236


>AL132904-27|CAC35854.1|  545|Caenorhabditis elegans Hypothetical
           protein ZC482.2 protein.
          Length = 545

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 509 ITGSTLKSFACEGSRLRFLKFSELLKCKHLLSNWNLLS 396
           I    LK   C+G ++      E  KCK L S  NL++
Sbjct: 199 IVRGNLKDCGCDGEKVNVSNVKEYSKCKTLDSGLNLVN 236


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,729,992
Number of Sequences: 27780
Number of extensions: 373819
Number of successful extensions: 907
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)